Project measure / variable:   CSNA03   pct_correct_cc_acq_Binghamton

ID, description, units MPD:112897   pct_correct_cc_acq_Binghamton   percentage of responses that are correct (reversal learning assay), CC   [%]  acquisition  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses that are correct (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains18 strains
Mean of the strain means63.45   % 60.9   %
Median of the strain means63.78   % 59.79   %
SD of the strain means± 7.4896 ± 7.7362
Coefficient of variation (CV)0.118 0.127
Min–max range of strain means51.86   –   82.22   % 51.7   –   77.31   %
Mean sample size per strain4.4   mice 4.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 53.9028 53.9028 0.3105 0.5784
strain 16 3889.1103 243.0694 1.4003 0.1534
sex:strain 16 3635.4338 227.2146 1.3089 0.2032
Residuals 117 20309.803 173.5881


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 59.83 14.99   7 5.6657 0.2505 37.5, 85.29 -0.48
129S1/SvImJ m 62.16 11.221   5 5.018 0.1805 48.201, 78.57 0.16
A/J f 66.04 15.177   6 6.196 0.2298 50.0, 95.0 0.35
A/J m 54.59 8.3557   6 3.4112 0.1531 39.098, 60.94 -0.82
C57BL/6J f 62.25 11.158   6 4.555 0.1792 47.727, 80.0 -0.16
C57BL/6J m 77.31 15.501   6 6.3283 0.2005 58.02, 100.0 2.12
CAST/EiJ f 56.34 13.516   7 5.1086 0.2399 38.384, 78.26 -0.95
CAST/EiJ m 65.02 3.7833   4 1.8916 0.0582 61.45, 70.37 0.53
CC002/UncJ f 69.35 5.5386   3 3.1977 0.0799 63.93, 75.0 0.79
CC002/UncJ m 75.56 34.57   2   24.445 0.4576 51.11, 100.0 1.89
CC004/TauUncJ f 54.54 19.939   4 9.9693 0.3655 25.758, 71.43 -1.19
CC004/TauUncJ m 58.33 13.792   7 5.2128 0.2364 45.783, 85.0 -0.33
CC006/TauUncJ f 52.73 12.734   3 7.3519 0.2415 43.182, 67.19 -1.43
CC006/TauUncJ m 52.36 13.21   3 7.6269 0.2523 37.762, 63.49 -1.1
CC011/UncJ f 82.22 16.776   3 9.6855 0.204 66.67, 100.0 2.51
CC011/UncJ m 64.42 5.6266   3 3.2485 0.0873 60.98, 70.91 0.45
CC012/GeniUncJ f 63.93 19.806   3 11.435 0.3098 45.69, 85.0 0.06
CC012/GeniUncJ m 52.78 3.0858   3 1.7816 0.0585 49.669, 55.84 -1.05
CC025/GeniUncJ f 63.64 0.0   1   0.0 0.0 63.64, 63.64 0.03
CC025/GeniUncJ m 57.41 10.472   2   7.405 0.1824 50.0, 64.81 -0.45
CC028/GeniUncJ f 72.03 15.714   3 9.0723 0.2182 60.87, 90.0 1.15
CC028/GeniUncJ m 51.7 14.395   3 8.311 0.2785 36.948, 65.71 -1.19
CC032/GeniUncJ f 66.97 25.501   2   18.032 0.3808 48.936, 85.0 0.47
CC032/GeniUncJ m 53.81 3.0677   3 1.7711 0.057 50.44, 56.44 -0.92
CC041/TauUncJ f 64.06 8.7944   6 3.5903 0.1373 57.58, 78.95 0.08
CC041/TauUncJ m 53.89 7.835   5 3.5039 0.1454 44.275, 62.22 -0.91
CC061/GeniUncJ f 67.26 16.329   3 9.4277 0.2428 52.86, 85.0 0.51
CC061/GeniUncJ m 64.88 13.187   3 7.6135 0.2032 55.74, 80.0 0.51
NOD/ShiLtJ f 69.56 18.976   5 8.4861 0.2728 41.212, 90.0 0.82
NOD/ShiLtJ m 61.93 17.353   5 7.7605 0.2802 43.75, 90.0 0.13
NZO/HlLtJ f 60.16 9.9983   7 3.779 0.1662 42.169, 72.73 -0.44
NZO/HlLtJ m 70.71 8.8638   4 4.4319 0.1254 61.4, 80.0 1.27
PWK/PhJ f 59.36 14.993   6 6.121 0.2526 45.344, 85.0 -0.55
PWK/PhJ m 61.25 9.6607   6 3.944 0.1577 45.794, 72.73 0.04
WSB/EiJ f 51.86 5.5421   5 2.4785 0.1069 46.667, 59.87 -1.55
WSB/EiJ m 58.16 2.3233   4 1.1616 0.0399 54.81, 60.0 -0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 59.8288571429 4.9797885701 69.6910674586 49.9666468272
129S1/SvImJ m 62.1602 5.8921652968 73.8293246131 50.4910753869
A/J f 66.0366666667 5.3787864093 76.6890712949 55.3842620385
A/J m 54.5896666667 5.3787864093 65.2420712949 43.9372620385
C57BL/6J f 62.2461666667 5.3787864093 72.8985712949 51.5937620385
C57BL/6J m 77.3133333333 5.3787864093 87.9657379615 66.6609287051
CAST/EiJ f 56.3434285714 4.9797885701 66.2056388871 46.4812182557
CAST/EiJ m 65.0225 6.5876410691 78.0689779364 51.9760220636
CC002/UncJ f 69.35 7.6067526892 84.4147750971 54.2852249029
CC002/UncJ m 75.555 9.316331344 94.0055060388 57.1044939612
CC004/TauUncJ f 54.5445 6.5876410691 67.5909779364 41.4980220636
CC004/TauUncJ m 58.3281428571 4.9797885701 68.1903531728 48.4659325414
CC006/TauUncJ f 52.7326666667 7.6067526892 67.7974417638 37.6678915696
CC006/TauUncJ m 52.3606666667 7.6067526892 67.4254417638 37.2958915696
CC011/UncJ f 82.2233333333 7.6067526892 97.2881084304 67.1585582362
CC011/UncJ m 64.4166666667 7.6067526892 79.4814417638 49.3518915696
CC012/GeniUncJ f 63.9333333333 7.6067526892 78.9981084304 48.8685582362
CC012/GeniUncJ m 52.7796666667 7.6067526892 67.8444417638 37.7148915696
CC028/GeniUncJ f 72.03 7.6067526892 87.0947750971 56.9652249029
CC028/GeniUncJ m 51.696 7.6067526892 66.7607750971 36.6312249029
CC032/GeniUncJ f 66.968 9.316331344 85.4185060388 48.5174939612
CC032/GeniUncJ m 53.81 7.6067526892 68.8747750971 38.7452249029
CC041/TauUncJ f 64.0566666667 5.3787864093 74.7090712949 53.4042620385
CC041/TauUncJ m 53.891 5.8921652968 65.5601246131 42.2218753869
CC061/GeniUncJ f 67.2566666667 7.6067526892 82.3214417638 52.1918915696
CC061/GeniUncJ m 64.8833333333 7.6067526892 79.9481084304 49.8185582362
NOD/ShiLtJ f 69.5604 5.8921652968 81.2295246131 57.8912753869
NOD/ShiLtJ m 61.93 5.8921652968 73.5991246131 50.2608753869
NZO/HlLtJ f 60.157 4.9797885701 70.0192103157 50.2947896843
NZO/HlLtJ m 70.71 6.5876410691 83.7564779364 57.6635220636
PWK/PhJ f 59.3608333333 5.3787864093 70.0132379615 48.7084287051
PWK/PhJ m 61.254 5.3787864093 71.9064046282 50.6015953718
WSB/EiJ f 51.8642 5.8921652968 63.5333246131 40.1950753869
WSB/EiJ m 58.165 6.5876410691 71.2114779364 45.1185220636


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 60.9945285714 3.85732764 68.6337638333 53.3552933095
A/J both 60.3131666667 3.8033763446 67.8455542152 52.7807791181
C57BL/6J both 69.77975 3.8033763446 77.3121375485 62.2473624515
CAST/EiJ both 60.6829642857 4.1290225556 68.8602770909 52.5056514805
CC002/UncJ both 72.4525 6.0136660239 84.3622504362 60.5427495638
CC004/TauUncJ both 56.4363214286 4.1290225556 64.6136342338 48.2590086234
CC006/TauUncJ both 52.5466666667 5.3787864093 63.1990712949 41.8942620385
CC011/UncJ both 73.32 5.3787864093 83.9724046282 62.6675953718
CC012/GeniUncJ both 58.3565 5.3787864093 69.0089046282 47.7040953718
CC028/GeniUncJ both 61.863 5.3787864093 72.5154046282 51.2105953718
CC032/GeniUncJ both 60.389 6.0136660239 72.2987504362 48.4792495638
CC041/TauUncJ both 58.9738333333 3.9890147631 66.8738680421 51.0737986246
CC061/GeniUncJ both 66.07 5.3787864093 76.7224046282 55.4175953718
NOD/ShiLtJ both 65.7452 4.1663900372 73.9965171444 57.4938828556
NZO/HlLtJ both 65.4335 4.1290225556 73.6108128052 57.2561871948
PWK/PhJ both 60.3074166667 3.8033763446 67.8398042152 52.7750291181
WSB/EiJ both 55.0146 4.4191239726 63.7664434598 46.2627565402




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA