Project measure / variable:   CSNA03   trials_cc_rev_Binghamton

ID, description, units MPD:112892   trials_cc_rev_Binghamton   total number of trials (reversal learning assay), CC   [n]  reversal  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total number of trials (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested17 strains18 strains
Mean of the strain means114.8   n 116.8   n
Median of the strain means125.6   n 110.6   n
SD of the strain means± 27.472 ± 34.154
Coefficient of variation (CV)0.2394 0.2924
Min–max range of strain means79.0   –   169.0   n 67.5   –   184.3   n
Mean sample size per strain4.5   mice 4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 190.4777 190.4777 0.0481 0.8268
strain 16 85474.1211 5342.1326 1.3483 0.1811
sex:strain 16 23531.2637 1470.704 0.3712 0.9865
Residuals 113 447736.219 3962.2674


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 125.6 49.521   7 18.717 0.3944 83.0, 199.0 0.39
129S1/SvImJ m 129.0 75.71   5 33.86 0.5869 42.0, 241.0 0.36
A/J f 141.8 24.219   6 9.8874 0.1708 110.0, 166.0 0.98
A/J m 127.4 74.91   5 33.502 0.588 20.0, 229.0 0.31
C57BL/6J f 126.0 67.19   5 30.05 0.5333 39.0, 215.0 0.41
C57BL/6J m 107.0 30.906   6 12.617 0.2888 70.0, 152.0 -0.29
CAST/EiJ f 82.71 64.72   7 24.463 0.7825 20.0, 180.0 -1.17
CAST/EiJ m 129.8 44.962   4 22.481 0.3465 85.0, 176.0 0.38
CC002/UncJ f 103.5 41.719   2   29.5 0.4031 74.0, 133.0 -0.41
CC002/UncJ m 145.5 122.3   2   86.5 0.8408 59.0, 232.0 0.84
CC004/TauUncJ f 80.5 95.07   4 47.533 1.181 28.0, 223.0 -1.25
CC004/TauUncJ m 90.29 64.77   7 24.479 0.7173 20.0, 192.0 -0.78
CC006/TauUncJ f 139.7 62.94   3 36.338 0.4506 67.0, 177.0 0.91
CC006/TauUncJ m 139.7 49.652   3 28.667 0.3555 111.0, 197.0 0.67
CC011/UncJ f 79.33 79.58   3 45.943 1.0031 28.0, 171.0 -1.29
CC011/UncJ m 68.5 40.305   2   28.5 0.5884 40.0, 97.0 -1.41
CC012/GeniUncJ f 169.0 104.6   3 60.38 0.6189 62.0, 271.0 1.97
CC012/GeniUncJ m 184.3 94.71   3 54.68 0.5138 97.0, 285.0 1.98
CC025/GeniUncJ m 67.5 21.92   2   15.5 0.3247 52.0, 83.0 -1.44
CC028/GeniUncJ f 136.3 48.645   3 28.085 0.3568 102.0, 192.0 0.78
CC028/GeniUncJ m 153.7 34.487   3 19.911 0.2244 123.0, 191.0 1.08
CC032/GeniUncJ f 131.5 82.73   2   58.5 0.6291 73.0, 190.0 0.61
CC032/GeniUncJ m 174.3 62.5   3 36.085 0.3585 112.0, 237.0 1.68
CC041/TauUncJ f 93.5 74.78   6 30.527 0.7997 37.0, 231.0 -0.77
CC041/TauUncJ m 80.2 48.422   5 21.655 0.6038 47.0, 162.0 -1.07
CC061/GeniUncJ f 79.0 68.64   3 39.627 0.8688 34.0, 158.0 -1.3
CC061/GeniUncJ m 99.67 50.65   3 29.242 0.5082 45.0, 145.0 -0.5
NOD/ShiLtJ f 124.4 99.61   5 44.547 0.8007 42.0, 290.0 0.35
NOD/ShiLtJ m 79.4 61.12   5 27.332 0.7697 24.0, 161.0 -1.1
NZO/HlLtJ f 82.43 39.719   7 15.012 0.4819 20.0, 127.0 -1.18
NZO/HlLtJ m 114.2 26.475   4 13.237 0.2317 87.0, 148.0 -0.08
PWK/PhJ f 128.2 82.77   6 33.791 0.6458 48.0, 283.0 0.49
PWK/PhJ m 106.3 35.892   6 14.653 0.3375 50.0, 146.0 -0.31
WSB/EiJ f 127.4 44.517   5 19.909 0.3494 66.0, 182.0 0.46
WSB/EiJ m 106.0 45.658   4 22.829 0.4307 68.0, 166.0 -0.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 125.5714285714 23.7915574017 172.7067948156 78.4360623272
129S1/SvImJ m 129.0 28.1505503506 184.7713174613 73.2286825387
A/J f 141.8333333333 25.6978190553 192.7453477255 90.9213189411
A/J m 127.4 28.1505503506 183.1713174613 71.6286825387
C57BL/6J f 126.0 28.1505503506 181.7713174613 70.2286825387
C57BL/6J m 107.0 25.6978190553 157.9120143922 56.0879856078
CAST/EiJ f 82.7142857143 23.7915574017 129.8496519585 35.5789194701
CAST/EiJ m 129.75 31.473272094 192.1042285191 67.3957714809
CC002/UncJ f 103.5 44.5099282475 191.682195643 15.317804357
CC002/UncJ m 145.5 44.5099282475 233.682195643 57.317804357
CC004/TauUncJ f 80.5 31.473272094 142.8542285191 18.1457714809
CC004/TauUncJ m 90.2857142857 23.7915574017 137.4210805299 43.1503480415
CC006/TauUncJ f 139.6666666667 36.3422042314 211.6671279078 67.6662054255
CC006/TauUncJ m 139.6666666667 36.3422042314 211.6671279078 67.6662054255
CC011/UncJ f 79.3333333333 36.3422042314 151.3337945745 7.3328720922
CC011/UncJ m 68.5 44.5099282475 156.682195643 -19.682195643
CC012/GeniUncJ f 169.0 36.3422042314 241.0004612412 96.9995387588
CC012/GeniUncJ m 184.3333333333 36.3422042314 256.3337945745 112.3328720922
CC028/GeniUncJ f 136.3333333333 36.3422042314 208.3337945745 64.3328720922
CC028/GeniUncJ m 153.6666666667 36.3422042314 225.6671279078 81.6662054255
CC032/GeniUncJ f 131.5 44.5099282475 219.682195643 43.317804357
CC032/GeniUncJ m 174.3333333333 36.3422042314 246.3337945745 102.3328720922
CC041/TauUncJ f 93.5 25.6978190553 144.4120143922 42.5879856078
CC041/TauUncJ m 80.2 28.1505503506 135.9713174613 24.4286825387
CC061/GeniUncJ f 79.0 36.3422042314 151.0004612412 6.9995387588
CC061/GeniUncJ m 99.6666666667 36.3422042314 171.6671279078 27.6662054255
NOD/ShiLtJ f 124.4 28.1505503506 180.1713174613 68.6286825387
NOD/ShiLtJ m 79.4 28.1505503506 135.1713174613 23.6286825387
NZO/HlLtJ f 82.4285714286 23.7915574017 129.5639376728 35.2932051844
NZO/HlLtJ m 114.25 31.473272094 176.6042285191 51.8957714809
PWK/PhJ f 128.1666666667 25.6978190553 179.0786810589 77.2546522745
PWK/PhJ m 106.3333333333 25.6978190553 157.2453477255 55.4213189411
WSB/EiJ f 127.4 28.1505503506 183.1713174613 71.6286825387
WSB/EiJ m 106.0 31.473272094 168.3542285191 43.6457714809


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 127.2857142857 18.4288611195 163.796611982 90.7748165895
A/J both 134.6166666667 19.05801268 172.3740270777 96.8593062556
C57BL/6J both 116.5 19.05801268 154.257360411 78.742639589
CAST/EiJ both 106.2321428571 19.7269172699 145.3147239041 67.1495618101
CC002/UncJ both 124.5 31.473272094 186.8542285191 62.1457714809
CC004/TauUncJ both 85.3928571429 19.7269172699 124.4754381899 46.3102760959
CC006/TauUncJ both 139.6666666667 25.6978190553 190.5786810589 88.7546522745
CC011/UncJ both 73.9166666667 28.7310351406 130.8380291929 16.9953041405
CC012/GeniUncJ both 176.6666666667 25.6978190553 227.5786810589 125.7546522745
CC028/GeniUncJ both 145.0 25.6978190553 195.9120143922 94.0879856078
CC032/GeniUncJ both 152.9166666667 28.7310351406 209.8380291929 95.9953041405
CC041/TauUncJ both 86.85 19.05801268 124.607360411 49.092639589
CC061/GeniUncJ both 89.3333333333 25.6978190553 140.2453477255 38.4213189411
NOD/ShiLtJ both 101.9 19.905445047 141.3362767726 62.4637232274
NZO/HlLtJ both 98.3392857143 19.7269172699 137.4218667613 59.2567046673
PWK/PhJ both 117.25 18.1711021157 153.2502306206 81.2497693794
WSB/EiJ both 116.7 21.1129127629 158.5284880959 74.8715119041




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA