Project measure / variable:   CSNA03   trials_cc_acq_Binghamton

ID, description, units MPD:112891   trials_cc_acq_Binghamton   total number of trials (reversal learning assay), CC   [n]  acquisition  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total number of trials (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains18 strains
Mean of the strain means76.83   n 94.63   n
Median of the strain means75.78   n 92.7   n
SD of the strain means± 27.719 ± 29.894
Coefficient of variation (CV)0.3608 0.3159
Min–max range of strain means33.0   –   131.3   n 46.667   –   157.3   n
Mean sample size per strain4.4   mice 4.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10152.0232 10152.0232 3.0856 0.0816
strain 16 57523.9113 3595.2445 1.0927 0.3698
sex:strain 16 47156.6864 2947.2929 0.8958 0.5755
Residuals 117 384940.9024 3290.0932


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 75.57 31.596   7 11.942 0.4181 34.0, 131.0 -0.05
129S1/SvImJ m 84.6 47.868   5 21.407 0.5658 28.0, 139.0 -0.34
A/J f 79.33 53.36   6 21.783 0.6726 20.0, 169.0 0.09
A/J m 123.0 74.24   6 30.307 0.6036 64.0, 266.0 0.95
C57BL/6J f 80.5 51.33   6 20.954 0.6376 20.0, 172.0 0.13
C57BL/6J m 58.17 54.96   6 22.437 0.9449 20.0, 131.0 -1.22
CAST/EiJ f 93.14 44.021   7 16.638 0.4726 23.0, 138.0 0.59
CAST/EiJ m 103.8 31.127   4 15.564 0.3 81.0, 148.0 0.31
CC002/UncJ f 52.33 21.362   3 12.333 0.4082 28.0, 68.0 -0.88
CC002/UncJ m 55.0 49.497   2   35.0 0.9 20.0, 90.0 -1.33
CC004/TauUncJ f 96.0 112.4   4 56.19 1.1707 32.0, 264.0 0.69
CC004/TauUncJ m 120.4 90.29   7 34.125 0.7497 20.0, 302.0 0.86
CC006/TauUncJ f 131.3 87.05   3 50.26 0.6628 46.0, 220.0 1.97
CC006/TauUncJ m 108.7 41.187   3 23.779 0.379 63.0, 143.0 0.47
CC011/UncJ f 33.0 18.358   3 10.599 0.5563 20.0, 54.0 -1.58
CC011/UncJ m 46.667 7.3711   3 4.2557 0.158 41.0, 55.0 -1.6
CC012/GeniUncJ f 57.33 51.43   3 29.695 0.8971 20.0, 116.0 -0.7
CC012/GeniUncJ m 111.3 37.287   3 21.528 0.3349 77.0, 151.0 0.56
CC025/GeniUncJ f 88.0 0.0   1   0.0 0.0 88.0, 88.0 0.4
CC025/GeniUncJ m 94.0 56.57   2   40.0 0.6018 54.0, 134.0 -0.02
CC028/GeniUncJ f 37.333 15.011   3 8.6667 0.4021 20.0, 46.0 -1.42
CC028/GeniUncJ m 140.7 95.26   3 55.0 0.6772 70.0, 249.0 1.54
CC032/GeniUncJ f 57.0 52.33   2   37.0 0.918 20.0, 94.0 -0.72
CC032/GeniUncJ m 157.3 64.7   3 37.356 0.4112 101.0, 228.0 2.1
CC041/TauUncJ f 49.0 18.91   6 7.7201 0.3859 24.0, 76.0 -1.0
CC041/TauUncJ m 91.4 46.307   5 20.709 0.5066 34.0, 143.0 -0.11
CC061/GeniUncJ f 74.33 56.62   3 32.692 0.7618 20.0, 133.0 -0.09
CC061/GeniUncJ m 70.0 55.05   3 31.786 0.7865 20.0, 129.0 -0.82
NOD/ShiLtJ f 67.6 63.63   5 28.455 0.9412 20.0, 165.0 -0.33
NOD/ShiLtJ m 98.2 78.21   5 34.976 0.7964 20.0, 221.0 0.12
NZO/HlLtJ f 76.0 22.723   7 8.5885 0.299 44.0, 102.0 -0.03
NZO/HlLtJ m 61.0 47.784   4 23.892 0.7833 20.0, 129.0 -1.13
PWK/PhJ f 106.0 84.38   6 34.446 0.796 20.0, 247.0 1.05
PWK/PhJ m 89.67 64.57   6 26.359 0.7201 22.0, 190.0 -0.17
WSB/EiJ f 129.2 33.581   5 15.018 0.2599 86.0, 168.0 1.89
WSB/EiJ m 89.5 34.23   4 17.115 0.3825 40.0, 118.0 -0.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 75.5714285714 21.6797904008 118.5071174106 32.6357397323
129S1/SvImJ m 84.6 25.6518739383 135.4021921429 33.7978078571
A/J f 79.3333333333 23.4168499972 125.709177679 32.9574889877
A/J m 123.0 23.4168499972 169.3758443456 76.6241556544
C57BL/6J f 80.5 23.4168499972 126.8758443456 34.1241556544
C57BL/6J m 58.1666666667 23.4168499972 104.5425110123 11.790822321
CAST/EiJ f 93.1428571429 21.6797904008 136.078545982 50.2071683037
CAST/EiJ m 103.75 28.6796669382 160.5485775188 46.9514224812
CC002/UncJ f 52.3333333333 33.1164268541 117.9186813735 -13.2520147068
CC002/UncJ m 55.0 40.5591739483 135.3253186506 -25.3253186506
CC004/TauUncJ f 96.0 28.6796669382 152.7985775188 39.2014224812
CC004/TauUncJ m 120.4285714286 21.6797904008 163.3642602677 77.4928825894
CC006/TauUncJ f 131.3333333333 33.1164268541 196.9186813735 65.7479852932
CC006/TauUncJ m 108.6666666667 33.1164268541 174.2520147068 43.0813186265
CC011/UncJ f 33.0 33.1164268541 98.5853480401 -32.5853480401
CC011/UncJ m 46.6666666667 33.1164268541 112.2520147068 -18.9186813735
CC012/GeniUncJ f 57.3333333333 33.1164268541 122.9186813735 -8.2520147068
CC012/GeniUncJ m 111.3333333333 33.1164268541 176.9186813735 45.7479852932
CC028/GeniUncJ f 37.3333333333 33.1164268541 102.9186813735 -28.2520147068
CC028/GeniUncJ m 140.6666666667 33.1164268541 206.2520147068 75.0813186265
CC032/GeniUncJ f 57.0 40.5591739483 137.3253186506 -23.3253186506
CC032/GeniUncJ m 157.3333333333 33.1164268541 222.9186813735 91.7479852932
CC041/TauUncJ f 49.0 23.4168499972 95.3758443456 2.6241556544
CC041/TauUncJ m 91.4 25.6518739383 142.2021921429 40.5978078571
CC061/GeniUncJ f 74.3333333333 33.1164268541 139.9186813735 8.7479852932
CC061/GeniUncJ m 70.0 33.1164268541 135.5853480401 4.4146519599
NOD/ShiLtJ f 67.6 25.6518739383 118.4021921429 16.7978078571
NOD/ShiLtJ m 98.2 25.6518739383 149.0021921429 47.3978078571
NZO/HlLtJ f 76.0 21.6797904008 118.9356888391 33.0643111609
NZO/HlLtJ m 61.0 28.6796669382 117.7985775188 4.2014224812
PWK/PhJ f 106.0 23.4168499972 152.3758443456 59.6241556544
PWK/PhJ m 89.6666666667 23.4168499972 136.0425110123 43.290822321
WSB/EiJ f 129.2 25.6518739383 180.0021921429 78.3978078571
WSB/EiJ m 89.5 28.6796669382 146.2985775188 32.7014224812


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 80.0857142857 16.7930934343 113.3435558521 46.8278727193
A/J both 101.1666666667 16.558213427 133.9593406867 68.3739926466
C57BL/6J both 69.3333333333 16.558213427 102.1260073534 36.5406593133
CAST/EiJ both 98.4464285714 17.9759325732 134.0468210701 62.8460360727
CC002/UncJ both 53.6666666667 26.1808342063 105.5164369021 1.8168964313
CC004/TauUncJ both 108.2142857143 17.9759325732 143.814678213 72.6138932156
CC006/TauUncJ both 120.0 23.4168499972 166.3758443456 73.6241556544
CC011/UncJ both 39.8333333333 23.4168499972 86.209177679 -6.5425110123
CC012/GeniUncJ both 84.3333333333 23.4168499972 130.709177679 37.9574889877
CC028/GeniUncJ both 89.0 23.4168499972 135.3758443456 42.6241556544
CC032/GeniUncJ both 107.1666666667 26.1808342063 159.0164369021 55.3168964313
CC041/TauUncJ both 70.2 17.3664007522 104.5932466674 35.8067533326
CC061/GeniUncJ both 72.1666666667 23.4168499972 118.5425110123 25.790822321
NOD/ShiLtJ both 82.9 18.1386140119 118.8225745634 46.9774254366
NZO/HlLtJ both 68.5 17.9759325732 104.1003924987 32.8996075013
PWK/PhJ both 97.8333333333 16.558213427 130.6260073534 65.0406593133
WSB/EiJ both 109.35 19.2389054538 147.4516441072 71.2483558928




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA