Project measure / variable:   CSNA03   total_time_in_acq_Binghamton

ID, description, units MPD:112883   total_time_in_acq_Binghamton   total time for all trials (reversal learning assay), founders   [min]  acquisition  
Data set, strains CSNA03   inbred w/CC8   8 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total time for all trials (reversal learning assay), founders acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means299.7   min 227.1   min
Median of the strain means246.7   min 137.7   min
SD of the strain means± 200.3 ± 204.3
Coefficient of variation (CV)0.6682 0.8994
Min–max range of strain means98.76   –   653.1   min 58.86   –   616.5   min
Mean sample size per strain6.1   mice 5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 118179.4765 118179.4765 1.3423 0.2504
strain 7 2610050.3913 372864.3416 4.235 0.0006
sex:strain 7 741854.1131 105979.159 1.2037 0.3117
Residuals 73 6427183.1758 88043.6051


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 237.6 145.3   7 54.91 0.6115 59.4, 417.3 -0.31
129S1/SvImJ m 431.0 440.0   5 196.8 1.0208 47.61, 950.3 1.0
A/J f 653.1 469.4   6 191.6 0.7187 24.843, 1123.0 1.76
A/J m 616.5 528.8   6 215.9 0.8577 94.08, 1432.0 1.91
C57BL/6J f 180.2 186.3   6 76.05 1.034 25.975, 537.1 -0.6
C57BL/6J m 78.85 64.3   6 26.249 0.8154 17.408, 162.1 -0.73
CAST/EiJ f 259.8 190.6   7 72.02 0.7335 25.33, 596.1 -0.2
CAST/EiJ m 296.4 132.1   4 66.04 0.4457 154.0, 426.7 0.34
NOD/ShiLtJ f 147.2 140.3   5 62.76 0.9535 17.765, 315.8 -0.76
NOD/ShiLtJ m 141.4 139.0   5 62.14 0.9824 13.987, 317.9 -0.42
NZO/HlLtJ f 565.4 603.9   7 228.3 1.068 77.42, 1726.0 1.33
NZO/HlLtJ m 58.86 51.1   4 25.55 0.8682 15.047, 132.7 -0.82
PWK/PhJ f 98.76 78.09   6 31.878 0.7907 20.942, 229.1 -1.0
PWK/PhJ m 60.28 42.187   6 17.223 0.6998 18.103, 115.7 -0.82
WSB/EiJ f 255.8 192.2   5 85.97 0.7515 88.86, 566.6 -0.22
WSB/EiJ m 133.9 87.44   4 43.722 0.6531 38.818, 231.1 -0.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 237.57 112.1501577273 461.0849420187 14.0550579813
129S1/SvImJ m 431.022 132.6978561604 695.4884459395 166.5555540605
A/J f 653.0905 121.1360152527 894.5142302405 411.6667697595
A/J m 616.5466666667 121.1360152527 857.9703969071 375.1229364262
C57BL/6J f 180.167 121.1360152527 421.5907302405 -61.2567302405
C57BL/6J m 78.8495 121.1360152527 320.2732302405 -162.5742302405
CAST/EiJ f 259.8042857143 112.1501577273 483.319227733 36.2893436956
CAST/EiJ m 296.35 148.3607134216 592.0324754442 0.6675245558
NOD/ShiLtJ f 147.1774 132.6978561604 411.6438459395 -117.2890459395
NOD/ShiLtJ m 141.438 132.6978561604 405.9044459395 -123.0284459395
NZO/HlLtJ f 565.4457142857 112.1501577273 788.9606563044 341.930772267
NZO/HlLtJ m 58.8575 148.3607134216 354.5399754442 -236.8249754442
PWK/PhJ f 98.7581666667 121.1360152527 340.1818969071 -142.6655635738
PWK/PhJ m 60.2841666667 121.1360152527 301.7078969071 -181.1395635738
WSB/EiJ f 255.792 132.6978561604 520.2584459395 -8.6744459395
WSB/EiJ m 133.897 148.3607134216 429.5794754442 -161.7854754442


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 334.296 86.8711386305 507.4299296134 161.1620703866
A/J both 634.8185833333 85.6560978311 805.5309401257 464.1062265409
C57BL/6J both 129.50825 85.6560978311 300.2206067924 -41.2041067924
CAST/EiJ both 278.0771428571 92.9899983402 463.4059422857 92.7483434286
NOD/ShiLtJ both 144.3077 93.83155394 331.3137173201 -42.6983173201
NZO/HlLtJ both 312.1516071429 92.9899983402 497.4804065714 126.8228077143
PWK/PhJ both 79.5211666667 85.6560978311 250.2335234591 -91.1911901257
WSB/EiJ both 194.8445 99.5233921203 393.1943344546 -3.5053344546




  GWAS USING LINEAR MIXED MODELS