Project measure / variable:   CSNA03   pct_correct_in_rev_Binghamton

ID, description, units MPD:112880   pct_correct_in_rev_Binghamton   percentage of responses that are correct (reversal learning assay), founders   [%]  reversal  
Data set, strains CSNA03   inbred w/CC8   8 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses that are correct (reversal learning assay), founders reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means50.57   % 50.96   %
Median of the strain means51.14   % 45.62   %
SD of the strain means± 6.4379 ± 16.828
Coefficient of variation (CV)0.1273 0.3302
Min–max range of strain means42.153   –   59.35   % 39.839   –   91.81   %
Mean sample size per strain6.0   mice 4.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.1827 2.1827 0.0049 0.9442
strain 7 6338.3302 905.4757 2.0435 0.0613
sex:strain 7 5470.974 781.5677 1.7639 0.1082
Residuals 71 31460.1933 443.1013


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 42.153 7.5636   7 2.8588 0.1794 26.289, 49.0 -1.31
129S1/SvImJ m 39.839 14.033   5 6.2759 0.3523 18.672, 54.76 -0.66
A/J f 42.62 14.52   6 5.9278 0.3407 18.072, 57.14 -1.23
A/J m 48.614 21.127   5 9.4485 0.4346 33.188, 85.0 -0.14
C57BL/6J f 47.594 7.9253   5 3.5443 0.1665 35.632, 56.41 -0.46
C57BL/6J m 43.623 7.0759   6 2.8887 0.1622 35.338, 51.97 -0.44
CAST/EiJ f 58.82 17.64   7 6.6674 0.2999 35.0, 90.0 1.28
CAST/EiJ m 44.177 8.6464   4 4.3232 0.1957 32.941, 53.41 -0.4
NOD/ShiLtJ f 51.75 16.603   5 7.4251 0.3209 32.069, 69.05 0.18
NOD/ShiLtJ m 91.81 72.32   5 32.341 0.7877 46.584, 219.3 2.43
NZO/HlLtJ f 59.35 14.253   7 5.3873 0.2402 38.583, 85.0 1.36
NZO/HlLtJ m 42.7 7.927   4 3.9635 0.1856 31.683, 50.57 -0.49
PWK/PhJ f 51.0 15.077   6 6.1552 0.2956 27.562, 72.92 0.07
PWK/PhJ m 47.063 4.3202   6 1.7637 0.0918 41.772, 53.97 -0.23
WSB/EiJ f 51.27 4.8206   5 2.1559 0.094 47.059, 58.87 0.11
WSB/EiJ m 49.893 6.9571   4 3.4786 0.1394 42.735, 57.83 -0.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 42.1531428571 7.9561415153 58.0172384652 26.2890472491
129S1/SvImJ m 39.8386 9.413833594 58.6092510608 21.0679489392
A/J f 42.6205 8.5936150201 59.7556816751 25.4853183249
A/J m 48.6136 9.413833594 67.3842510608 29.8429489392
C57BL/6J f 47.594 9.413833594 66.3646510608 28.8233489392
C57BL/6J m 43.6231666667 8.5936150201 60.7583483417 26.4879849916
CAST/EiJ f 58.8247142857 7.9561415153 74.6888098938 42.9606186777
CAST/EiJ m 44.177 10.5249859225 65.1632258769 23.1907741231
NOD/ShiLtJ f 51.7464 9.413833594 70.5170510608 32.9757489392
NOD/ShiLtJ m 91.812 9.413833594 110.5826510608 73.0413489392
NZO/HlLtJ f 59.3461428571 7.9561415153 75.2102384652 43.4820472491
NZO/HlLtJ m 42.7 10.5249859225 63.6862258769 21.7137741231
PWK/PhJ f 50.9998333333 8.5936150201 68.1350150084 33.8646516583
PWK/PhJ m 47.0635 8.5936150201 64.1986816751 29.9283183249
WSB/EiJ f 51.271 9.413833594 70.0416510608 32.5003489392
WSB/EiJ m 49.89325 10.5249859225 70.8794758769 28.9070241231


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 40.9958714286 6.1628007178 53.2841470471 28.7075958101
A/J both 45.61705 6.373195471 58.3248408415 32.9092591585
C57BL/6J both 45.6085833333 6.373195471 58.3163741748 32.9007924919
CAST/EiJ both 51.5008571429 6.5968840463 64.6546703354 38.3470439503
NOD/ShiLtJ both 71.7792 6.6565855713 85.0520546524 58.5063453476
NZO/HlLtJ both 51.0230714286 6.5968840463 64.1768846211 37.869258236
PWK/PhJ both 49.0316666667 6.0766034556 61.148069826 36.9152635074
WSB/EiJ both 50.582125 7.0603751955 64.6601132956 36.5041367044




  GWAS USING LINEAR MIXED MODELS