Project measure / variable:   CSNA03   pct_correct_in_acq_Binghamton

ID, description, units MPD:112879   pct_correct_in_acq_Binghamton   percentage of responses that are correct (reversal learning assay), founders   [%]  acquisition  
Data set, strains CSNA03   inbred w/CC8   8 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses that are correct (reversal learning assay), founders acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means60.67   % 63.89   %
Median of the strain means59.99   % 62.05   %
SD of the strain means± 5.4696 ± 7.1815
Coefficient of variation (CV)0.0901 0.1124
Min–max range of strain means51.86   –   69.56   % 54.59   –   77.31   %
Mean sample size per strain6.1   mice 5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 242.395 242.395 1.5353 0.2193
strain 7 1514.5109 216.3587 1.3704 0.2308
sex:strain 7 1601.82 228.8314 1.4494 0.1991
Residuals 73 11525.5554 157.8843


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 59.83 14.99   7 5.6657 0.2505 37.5, 85.29 -0.15
129S1/SvImJ m 62.16 11.221   5 5.018 0.1805 48.201, 78.57 -0.24
A/J f 66.04 15.177   6 6.196 0.2298 50.0, 95.0 0.98
A/J m 54.59 8.3557   6 3.4112 0.1531 39.098, 60.94 -1.3
C57BL/6J f 62.25 11.158   6 4.555 0.1792 47.727, 80.0 0.29
C57BL/6J m 77.31 15.501   6 6.3283 0.2005 58.02, 100.0 1.87
CAST/EiJ f 56.34 13.516   7 5.1086 0.2399 38.384, 78.26 -0.79
CAST/EiJ m 65.02 3.7833   4 1.8916 0.0582 61.45, 70.37 0.16
NOD/ShiLtJ f 69.56 18.976   5 8.4861 0.2728 41.212, 90.0 1.62
NOD/ShiLtJ m 61.93 17.353   5 7.7605 0.2802 43.75, 90.0 -0.27
NZO/HlLtJ f 60.16 9.9983   7 3.779 0.1662 42.169, 72.73 -0.09
NZO/HlLtJ m 70.71 8.8638   4 4.4319 0.1254 61.4, 80.0 0.95
PWK/PhJ f 59.36 14.993   6 6.121 0.2526 45.344, 85.0 -0.24
PWK/PhJ m 61.25 9.6607   6 3.944 0.1577 45.794, 72.73 -0.37
WSB/EiJ f 51.86 5.5421   5 2.4785 0.1069 46.667, 59.87 -1.61
WSB/EiJ m 58.16 2.3233   4 1.1616 0.0399 54.81, 60.0 -0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 59.8288571429 4.7492002429 69.2939995772 50.3637147085
129S1/SvImJ m 62.1602 5.6193295086 73.3595075601 50.9608924399
A/J f 66.0366666667 5.1297225499 76.2601889651 55.8131443682
A/J m 54.5896666667 5.1297225499 64.8131889651 44.3661443682
C57BL/6J f 62.2461666667 5.1297225499 72.4696889651 52.0226443682
C57BL/6J m 77.3133333333 5.1297225499 87.5368556318 67.0898110349
CAST/EiJ f 56.3434285714 4.7492002429 65.8085710058 46.878286137
CAST/EiJ m 65.0225 6.2826013846 77.5437065026 52.5012934974
NOD/ShiLtJ f 69.5604 5.6193295086 80.7597075601 58.3610924399
NOD/ShiLtJ m 61.93 5.6193295086 73.1293075601 50.7306924399
NZO/HlLtJ f 60.157 4.7492002429 69.6221424344 50.6918575656
NZO/HlLtJ m 70.71 6.2826013846 83.2312065026 58.1887934974
PWK/PhJ f 59.3608333333 5.1297225499 69.5843556318 49.1373110349
PWK/PhJ m 61.254 5.1297225499 71.4775222985 51.0304777015
WSB/EiJ f 51.8642 5.6193295086 63.0635075601 40.6648924399
WSB/EiJ m 58.165 6.2826013846 70.6862065026 45.6437934974


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 60.9945285714 3.6787146897 68.326196375 53.6628607679
A/J both 60.3131666667 3.6272616006 67.5422886115 53.0840447218
C57BL/6J both 69.77975 3.6272616006 77.0088719449 62.5506280551
CAST/EiJ both 60.6829642857 3.937828815 68.5310457963 52.8348827752
NOD/ShiLtJ both 65.7452 3.9734660012 73.6643063203 57.8260936797
NZO/HlLtJ both 65.4335 3.937828815 73.2815815105 57.5854184895
PWK/PhJ both 60.3074166667 3.6272616006 67.5365386115 53.0782947218
WSB/EiJ both 55.0146 4.2144971314 63.41408067 46.61511933




  GWAS USING LINEAR MIXED MODELS