Project measure / variable:   CSNA03   trials_in_acq_Binghamton

ID, description, units MPD:112873   trials_in_acq_Binghamton   total number of trials (reversal learning assay), founders   [n]  acquisition  
Data set, strains CSNA03   inbred w/CC8   8 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total number of trials (reversal learning assay), founders acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means88.42   n 88.49   n
Median of the strain means79.91   n 89.59   n
SD of the strain means± 20.328 ± 21.422
Coefficient of variation (CV)0.2299 0.2421
Min–max range of strain means67.6   –   129.2   n 58.17   –   123.0   n
Mean sample size per strain6.1   mice 5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 37.6869 37.6869 0.0128 0.9102
strain 7 17794.5507 2542.0787 0.8638 0.5392
sex:strain 7 14941.5646 2134.5092 0.7253 0.6509
Residuals 73 214827.3214 2942.84


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 75.57 31.596   7 11.942 0.4181 34.0, 131.0 -0.63
129S1/SvImJ m 84.6 47.868   5 21.407 0.5658 28.0, 139.0 -0.18
A/J f 79.33 53.36   6 21.783 0.6726 20.0, 169.0 -0.45
A/J m 123.0 74.24   6 30.307 0.6036 64.0, 266.0 1.61
C57BL/6J f 80.5 51.33   6 20.954 0.6376 20.0, 172.0 -0.39
C57BL/6J m 58.17 54.96   6 22.437 0.9449 20.0, 131.0 -1.42
CAST/EiJ f 93.14 44.021   7 16.638 0.4726 23.0, 138.0 0.23
CAST/EiJ m 103.8 31.127   4 15.564 0.3 81.0, 148.0 0.71
NOD/ShiLtJ f 67.6 63.63   5 28.455 0.9412 20.0, 165.0 -1.02
NOD/ShiLtJ m 98.2 78.21   5 34.976 0.7964 20.0, 221.0 0.45
NZO/HlLtJ f 76.0 22.723   7 8.5885 0.299 44.0, 102.0 -0.61
NZO/HlLtJ m 61.0 47.784   4 23.892 0.7833 20.0, 129.0 -1.28
PWK/PhJ f 106.0 84.38   6 34.446 0.796 20.0, 247.0 0.86
PWK/PhJ m 89.67 64.57   6 26.359 0.7201 22.0, 190.0 0.05
WSB/EiJ f 129.2 33.581   5 15.018 0.2599 86.0, 168.0 2.01
WSB/EiJ m 89.5 34.23   4 17.115 0.3825 40.0, 118.0 0.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 75.5714285714 20.5037976258 116.4354383096 34.7074188333
129S1/SvImJ m 84.6 24.2604205222 132.9509483736 36.2490516264
A/J f 79.3333333333 22.1466326243 123.4715085017 35.195158165
A/J m 123.0 22.1466326243 167.1381751683 78.8618248317
C57BL/6J f 80.5 22.1466326243 124.6381751683 36.3618248317
C57BL/6J m 58.1666666667 22.1466326243 102.304841835 14.0284914983
CAST/EiJ f 93.1428571429 20.5037976258 134.006866881 52.2788474047
CAST/EiJ m 103.75 27.1239747252 157.80800367 49.69199633
NOD/ShiLtJ f 67.6 24.2604205222 115.9509483736 19.2490516264
NOD/ShiLtJ m 98.2 24.2604205222 146.5509483736 49.8490516264
NZO/HlLtJ f 76.0 20.5037976258 116.8640097381 35.1359902619
NZO/HlLtJ m 61.0 27.1239747252 115.05800367 6.94199633
PWK/PhJ f 106.0 22.1466326243 150.1381751683 61.8618248317
PWK/PhJ m 89.6666666667 22.1466326243 133.804841835 45.5284914983
WSB/EiJ f 129.2 24.2604205222 177.5509483736 80.8490516264
WSB/EiJ m 89.5 27.1239747252 143.55800367 35.44199633


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 80.0857142857 15.8821733478 111.7388401207 48.4325884507
A/J both 101.1666666667 15.6600341091 132.3770696374 69.9562636959
C57BL/6J both 69.3333333333 15.6600341091 100.5437363041 38.1229303626
CAST/EiJ both 98.4464285714 17.0008508756 132.3290755041 64.5637816387
NOD/ShiLtJ both 82.9 17.1547078657 117.0892834718 48.7107165282
NZO/HlLtJ both 68.5 17.0008508756 102.3826469327 34.6173530673
PWK/PhJ both 97.8333333333 15.6600341091 129.0437363041 66.6229303626
WSB/EiJ both 109.35 18.1953153916 145.6132112802 73.0867887198




  GWAS USING LINEAR MIXED MODELS