Project measure / variable:   Schoonjans1   liver_wt_HFD

ID, description, units MPD:112856   liver_wt_HFD   liver weight   [g]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 29wks
Procedure organ weights
Ontology mappings

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  STRAIN COMPARISON PLOT
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Schoonjans1 - liver weight HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means2.1265   g
Median of the strain means1.9885   g
SD of the strain means± 0.73349
Coefficient of variation (CV)0.3449
Min–max range of strain means0.9953   –   4.0826   g
Mean sample size per strain4.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 91.2491 2.6071 12.1451 < 0.0001
Residuals 140 30.0529 0.2147


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 1.295 0.314   5 0.14043 0.2425 1.0684, 1.8331 -1.13
BXD100 m 2.3781 1.0863   7 0.41058 0.4568 1.4493, 4.0871 0.34
BXD11 m 2.1012 0.45113   3 0.26046 0.2147 1.776, 2.6162 -0.03
BXD12 m 0.9953 0.0825   4 0.04125 0.0829 0.8975, 1.0794 -1.54
BXD27 m 1.4546 0.2098   5 0.09383 0.1442 1.1387, 1.6691 -0.92
BXD32 m 1.6827 0.25013   4 0.12507 0.1487 1.3128, 1.8619 -0.61
BXD34 m 1.0563 0.12538   4 0.06269 0.1187 0.8911, 1.1912 -1.46
BXD39 m 2.292 0.76549   5 0.34234 0.334 1.71, 3.56 0.23
BXD40 m 2.2678 0.30584   5 0.13677 0.1349 1.892, 2.5862 0.19
BXD43 m 2.4696 0.71249   5 0.31863 0.2885 1.5974, 3.2966 0.47
BXD45 m 1.9165 0.15861   5 0.07093 0.0828 1.7811, 2.1399 -0.29
BXD48 m 1.7375 0.27202   5 0.12165 0.1566 1.4779, 2.1095 -0.53
BXD48a m 2.9049 0.88915   5 0.39764 0.3061 2.0471, 4.1522 1.06
BXD49 m 2.4108 0.97776   5 0.43727 0.4056 1.5143, 4.0847 0.39
BXD51 m 1.8026 0.15032   4 0.07516 0.0834 1.5927, 1.9211 -0.44
BXD53 m 3.8136 0.50815   5 0.22725 0.1332 3.0742, 4.3852 2.3
BXD55 m 2.3921 0.57874   5 0.25882 0.2419 1.6187, 2.8806 0.36
BXD6 m 1.574 0.26324   5 0.11772 0.1672 1.1443, 1.7905 -0.75
BXD62 m 2.0026 0.40481   5 0.18104 0.2021 1.4198, 2.3183 -0.17
BXD63 m 3.5502 0.40313   5 0.18029 0.1136 3.0514, 4.088 1.94
BXD64 m 1.9743 0.41939   5 0.18756 0.2124 1.5335, 2.4422 -0.21
BXD66 m 1.5795 0.20526   9 0.06842 0.13 1.2802, 1.8764 -0.75
BXD67 m 3.1291 0.2571   5 0.11498 0.0822 2.7408, 3.3425 1.37
BXD69 m 2.4369 0.23242   5 0.10394 0.0954 2.1171, 2.7633 0.42
BXD73 m 1.4811 0.16099   5 0.072 0.1087 1.2667, 1.6697 -0.88
BXD75 m 2.814 0.15431   4 0.07715 0.0548 2.6556, 3.0249 0.94
BXD77 m 1.8562 0.23631   5 0.10568 0.1273 1.5213, 2.126 -0.37
BXD79 m 2.4785 0.48791   5 0.2182 0.1969 1.8763, 2.9796 0.48
BXD8 m 1.37 0.28296   4 0.14148 0.2065 1.13, 1.78 -1.03
BXD81 m 2.4342 0.28434   5 0.12716 0.1168 2.2202, 2.919 0.42
BXD84 m 2.5809 0.47669   5 0.21318 0.1847 2.2486, 3.4174 0.62
BXD87 m 1.3735 0.164   5 0.07334 0.1194 1.1634, 1.6058 -1.03
BXD89 m 1.457 0.2076   5 0.09284 0.1425 1.1087, 1.6226 -0.91
BXD90 m 1.6655 0.14645   3 0.08455 0.0879 1.5423, 1.8274 -0.63
C57BL/6J m 4.0826 0.39496   5 0.17663 0.0967 3.7437, 4.662 2.67
DBA/2J m 1.7423 0.27109   5 0.12124 0.1556 1.4702, 2.1503 -0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 1.29498 0.2072021513 1.704629784 0.885330216
BXD100 m 2.3781428571 0.1751177798 2.724360115 2.0319255993
BXD11 m 2.1011666667 0.2674968271 2.6300222637 1.5723110696
BXD12 m 0.9953 0.2316590477 1.453302382 0.537297618
BXD27 m 1.45464 0.2072021513 1.864289784 1.044990216
BXD32 m 1.682675 0.2316590477 2.140677382 1.224672618
BXD34 m 1.05635 0.2316590477 1.514352382 0.598347618
BXD39 m 2.292 0.2072021513 2.701649784 1.882350216
BXD40 m 2.26782 0.2072021513 2.677469784 1.858170216
BXD43 m 2.4696 0.2072021513 2.879249784 2.059950216
BXD45 m 1.91646 0.2072021513 2.326109784 1.506810216
BXD48 m 1.73748 0.2072021513 2.147129784 1.327830216
BXD48a m 2.9049 0.2072021513 3.314549784 2.495250216
BXD49 m 2.4108 0.2072021513 2.820449784 2.001150216
BXD51 m 1.80255 0.2316590477 2.260552382 1.344547618
BXD53 m 3.81362 0.2072021513 4.223269784 3.403970216
BXD55 m 2.39206 0.2072021513 2.801709784 1.982410216
BXD6 m 1.57398 0.2072021513 1.983629784 1.164330216
BXD62 m 2.00256 0.2072021513 2.412209784 1.592910216
BXD63 m 3.55024 0.2072021513 3.959889784 3.140590216
BXD64 m 1.97432 0.2072021513 2.383969784 1.564670216
BXD66 m 1.5795111111 0.1544393651 1.8848460324 1.2741761898
BXD67 m 3.12908 0.2072021513 3.538729784 2.719430216
BXD69 m 2.4369 0.2072021513 2.846549784 2.027250216
BXD73 m 1.48108 0.2072021513 1.890729784 1.071430216
BXD75 m 2.81405 0.2316590477 3.272052382 2.356047618
BXD77 m 1.85618 0.2072021513 2.265829784 1.446530216
BXD79 m 2.47848 0.2072021513 2.888129784 2.068830216
BXD8 m 1.37 0.2316590477 1.828002382 0.911997618
BXD81 m 2.43424 0.2072021513 2.843889784 2.024590216
BXD84 m 2.58094 0.2072021513 2.990589784 2.171290216
BXD87 m 1.37352 0.2072021513 1.783169784 0.963870216
BXD89 m 1.45698 0.2072021513 1.866629784 1.047330216
BXD90 m 1.6654666667 0.2674968271 2.1943222637 1.1366110696
C57BL/6J m 4.08264 0.2072021513 4.492289784 3.672990216
DBA/2J m 1.74232 0.2072021513 2.151969784 1.332670216




  GWAS USING LINEAR MIXED MODELS