Project measure / variable:   Schoonjans1   TCDCA_plasma_t60_HFD

ID, description, units MPD:112743   TCDCA_plasma_t60_HFD   plasma bile acid taurochenodeoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min   [ng/mL]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid taurochenodeoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min HFD

BXD69C57BL/6JBXD48aBXD27BXD75BXD48BXD40BXD79BXD77BXD62BXD81BXD45BXD34BXD53BXD73BXD39BXD49BXD51BXD12BXD64BXD89BXD90BXD8BXD55BXD87BXD11BXD66BXD32BXD6BXD100BXD84BXD63BXD43DBA/2JBXD1BXD67 ng/mL 020406080100120140160180200220femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means49.007   ng/mL
Median of the strain means44.797   ng/mL
SD of the strain means± 26.38
Coefficient of variation (CV)0.5383
Min–max range of strain means9.0965   –   113.8   ng/mL
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 100427.3767 2869.3536 2.5393 < 0.0001
Residuals 121 136729.9748 1129.9998


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 14.317 5.6298   5 2.5177 0.3932 10.284, 24.25 -1.32
BXD100 m 24.721 14.987   9 4.9956 0.6062 2.95, 53.87 -0.92
BXD11 m 30.919 10.25   3 5.9177 0.3315 20.224, 40.656 -0.69
BXD12 m 44.395 43.377   4 21.689 0.9771 8.416, 107.5 -0.17
BXD27 m 95.33 35.92   5 16.064 0.3768 57.35, 142.2 1.76
BXD32 m 28.275 9.2854   4 4.6427 0.3284 19.358, 40.666 -0.79
BXD34 m 55.41 22.924   4 11.462 0.4138 31.774, 86.62 0.24
BXD39 m 49.838 35.601   3 20.554 0.7143 24.722, 90.58 0.03
BXD40 m 66.57 24.136   4 12.068 0.3626 40.796, 91.96 0.67
BXD43 m 19.272 6.0777   5 2.718 0.3154 11.008, 27.096 -1.13
BXD45 m 57.7 25.631   5 11.462 0.4442 23.7, 86.84 0.33
BXD48 m 72.6 47.254   5 21.133 0.6509 22.482, 134.6 0.89
BXD48a m 100.9 63.52   4 31.762 0.6295 48.06, 176.0 1.97
BXD49 m 49.784 24.582   5 10.993 0.4938 31.494, 92.97 0.03
BXD51 m 45.199 19.263   3 11.121 0.4262 33.842, 67.44 -0.14
BXD53 m 54.59 40.286   5 18.016 0.738 17.846, 110.8 0.21
BXD55 m 33.828 10.97   5 4.906 0.3243 17.586, 48.202 -0.58
BXD6 m 27.147 26.476   5 11.84 0.9753 6.648, 69.82 -0.83
BXD62 m 63.58 20.697   4 10.348 0.3255 33.32, 78.46 0.55
BXD63 m 19.645 6.8879   5 3.0804 0.3506 11.894, 29.016 -1.11
BXD64 m 43.309 34.219   5 15.303 0.7901 18.824, 102.9 -0.22
BXD66 m 30.251 16.706   3 9.6453 0.5522 18.99, 49.446 -0.71
BXD67 m 9.0965 2.9544   5 1.3212 0.3248 6.628, 13.916 -1.51
BXD69 m 113.8 83.89   4 41.945 0.7374 29.0, 221.9 2.46
BXD73 m 52.55 22.366   3 12.913 0.4256 31.754, 76.21 0.13
BXD75 m 72.89 56.06   4 28.032 0.7691 36.496, 155.2 0.91
BXD77 m 64.15 49.948   5 22.337 0.7786 28.668, 147.4 0.57
BXD79 m 65.08 54.03   5 24.165 0.8303 17.722, 123.6 0.61
BXD8 m 34.364 17.542   3 10.128 0.5105 21.938, 54.43 -0.56
BXD81 m 61.48 39.968   5 17.874 0.6501 12.7, 121.0 0.47
BXD84 m 23.3 24.762   5 11.074 1.0627 3.136, 66.2 -0.97
BXD87 m 32.004 11.93   4 5.9648 0.3728 17.892, 42.008 -0.64
BXD89 m 42.287 12.569   5 5.6211 0.2972 24.514, 58.29 -0.25
BXD90 m 40.161 19.471   4 9.7355 0.4848 16.179, 62.97 -0.34
C57BL/6J m 108.5 94.46   2   66.8 0.8706 41.708, 175.3 2.26
DBA/2J m 17.027 14.028   3 8.0993 0.8239 7.922, 33.182 -1.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 14.3172 15.033294993 44.0795726582 -15.4451726582
BXD100 m 24.7211111111 11.20515651 46.9046739229 2.5375482993
BXD11 m 30.9193333333 19.4079003822 69.3423912162 -7.5037245496
BXD12 m 44.3955 16.8077347651 77.6708442177 11.1201557823
BXD27 m 95.328 15.033294993 125.0903726582 65.5656273418
BXD32 m 28.2755 16.8077347651 61.5508442177 -4.9998442177
BXD34 m 55.405 16.8077347651 88.6803442177 22.1296557823
BXD39 m 49.838 19.4079003822 88.2610578829 11.4149421171
BXD40 m 66.574 16.8077347651 99.8493442177 33.2986557823
BXD43 m 19.2724 15.033294993 49.0347726582 -10.4899726582
BXD45 m 57.7012 15.033294993 87.4635726582 27.9388273418
BXD48 m 72.5976 15.033294993 102.3599726582 42.8352273418
BXD48a m 100.9155 16.8077347651 134.1908442177 67.6401557823
BXD49 m 49.784 15.033294993 79.5463726582 20.0216273418
BXD51 m 45.199 19.4079003822 83.6220578829 6.7759421171
BXD53 m 54.5912 15.033294993 84.3535726582 24.8288273418
BXD55 m 33.8284 15.033294993 63.5907726582 4.0660273418
BXD6 m 27.147 15.033294993 56.9093726582 -2.6153726582
BXD62 m 63.5825 16.8077347651 96.8578442177 30.3071557823
BXD63 m 19.6446 15.033294993 49.4069726582 -10.1177726582
BXD64 m 43.3092 15.033294993 73.0715726582 13.5468273418
BXD66 m 30.2513333333 19.4079003822 68.6743912162 -8.1717245496
BXD67 m 9.09652 15.033294993 38.8588926582 -20.6658526582
BXD69 m 113.7675 16.8077347651 147.0428442177 80.4921557823
BXD73 m 52.5493333333 19.4079003822 90.9723912162 14.1262754504
BXD75 m 72.8945 16.8077347651 106.1698442177 39.6191557823
BXD77 m 64.15 15.033294993 93.9123726582 34.3876273418
BXD79 m 65.0768 15.033294993 94.8391726582 35.3144273418
BXD8 m 34.364 19.4079003822 72.7870578829 -4.0590578829
BXD81 m 61.4836 15.033294993 91.2459726582 31.7212273418
BXD84 m 23.3 15.033294993 53.0623726582 -6.4623726582
BXD87 m 32.0035 16.8077347651 65.2788442177 -1.2718442177
BXD89 m 42.2872 15.033294993 72.0495726582 12.5248273418
BXD90 m 40.16075 16.8077347651 73.4360942177 6.8854057823
C57BL/6J m 108.504 23.7697264575 155.5624430853 61.4455569147
DBA/2J m 17.0268333333 19.4079003822 55.4498912162 -21.3962245496




  GWAS USING LINEAR MIXED MODELS

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