Project measure / variable:   Schoonjans1   TaMCA_plasma_t60_HFD

ID, description, units MPD:112737   TaMCA_plasma_t60_HFD   plasma bile acid tauro-α-muricholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min   [ng/mL]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid tauro-α-muricholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min HFD

C57BL/6JBXD48aBXD12BXD69BXD48BXD27BXD81BXD77BXD75BXD45BXD73BXD40BXD53BXD34BXD79BXD49BXD51BXD64BXD90BXD39BXD62BXD6BXD32BXD66BXD100BXD55BXD84BXD89BXD43BXD8BXD11BXD87BXD63DBA/2JBXD1BXD67 ng/mL 0100200300400500600700800femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means114.9   ng/mL
Median of the strain means98.09   ng/mL
SD of the strain means± 74.11
Coefficient of variation (CV)0.645
Min–max range of strain means18.338   –   287.9   ng/mL
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 763713.374 21820.3821 1.7971 0.0104
Residuals 121 1469170.731 12141.9069


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 27.002 11.004   5 4.9213 0.4075 18.366, 42.824 -1.19
BXD100 m 59.2 52.34   9 17.448 0.8842 4.702, 182.7 -0.75
BXD11 m 48.969 12.632   3 7.2933 0.258 38.352, 62.94 -0.89
BXD12 m 256.4 364.5   4 182.3 1.4214 28.018, 800.9 1.91
BXD27 m 179.1 104.3   5 46.662 0.5827 105.4, 352.9 0.87
BXD32 m 69.97 34.233   4 17.117 0.4893 39.13, 114.9 -0.61
BXD34 m 128.9 116.1   4 58.03 0.9003 36.89, 298.8 0.19
BXD39 m 89.35 82.67   3 47.729 0.9252 37.722, 184.7 -0.34
BXD40 m 147.1 46.811   4 23.405 0.3183 80.23, 182.7 0.43
BXD43 m 52.37 24.519   5 10.965 0.4682 26.752, 88.17 -0.84
BXD45 m 156.8 75.72   5 33.864 0.483 60.35, 235.1 0.57
BXD48 m 207.5 139.8   5 62.5 0.6735 47.71, 388.1 1.25
BXD48a m 281.3 215.4   4 107.7 0.7658 70.57, 505.5 2.25
BXD49 m 107.7 56.17   5 25.121 0.5214 64.26, 199.9 -0.1
BXD51 m 107.4 51.48   3 29.721 0.4795 77.34, 166.8 -0.1
BXD53 m 140.8 169.8   5 75.94 1.2058 23.164, 404.8 0.35
BXD55 m 56.66 9.8632   5 4.411 0.1741 47.738, 73.11 -0.79
BXD6 m 75.05 79.26   5 35.446 1.0561 14.014, 210.7 -0.54
BXD62 m 75.38 10.732   4 5.3662 0.1424 59.29, 81.16 -0.53
BXD63 m 37.974 17.5   5 7.8261 0.4608 19.156, 57.63 -1.04
BXD64 m 105.0 101.8   5 45.539 0.9695 37.542, 283.5 -0.13
BXD66 m 67.38 52.96   3 30.574 0.7859 33.432, 128.4 -0.64
BXD67 m 18.338 6.0544   5 2.7076 0.3302 12.838, 28.714 -1.3
BXD69 m 247.9 186.6   4 93.3 0.7527 31.038, 455.6 1.79
BXD73 m 149.7 75.11   3 43.367 0.5019 84.27, 231.7 0.47
BXD75 m 165.9 176.4   4 88.22 1.0632 48.862, 424.6 0.69
BXD77 m 168.1 141.7   5 63.39 0.8434 52.42, 364.4 0.72
BXD79 m 122.8 123.2   5 55.09 1.003 17.136, 310.1 0.11
BXD8 m 51.65 47.331   3 27.327 0.9164 24.208, 106.3 -0.85
BXD81 m 174.4 127.2   5 56.91 0.7297 20.774, 327.2 0.8
BXD84 m 55.09 61.77   5 27.623 1.1211 13.272, 163.6 -0.81
BXD87 m 41.322 15.26   4 7.6302 0.3693 28.188, 57.73 -0.99
BXD89 m 54.22 17.113   5 7.6532 0.3156 33.716, 79.77 -0.82
BXD90 m 91.17 45.823   4 22.911 0.5026 38.925, 150.1 -0.32
C57BL/6J m 287.9 210.0   2   148.5 0.7295 139.4, 436.4 2.33
DBA/2J m 30.78 38.357   3 22.146 1.2462 6.222, 74.98 -1.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 27.0016 49.2786096954 124.5616057417 -70.5584057417
BXD100 m 59.1951111111 36.7301070386 131.912046019 -13.5218237968
BXD11 m 48.9693333333 63.6184115582 174.9187591645 -76.9800924978
BXD12 m 256.4395 55.0951605578 365.5149023618 147.3640976382
BXD27 m 179.06 49.2786096954 276.6200057417 81.4999942583
BXD32 m 69.967 55.0951605578 179.0424023618 -39.1084023618
BXD34 m 128.92 55.0951605578 237.9954023618 19.8445976382
BXD39 m 89.3513333333 63.6184115582 215.3007591645 -36.5980924978
BXD40 m 147.0575 55.0951605578 256.1329023618 37.9820976382
BXD43 m 52.368 49.2786096954 149.9280057417 -45.1920057417
BXD45 m 156.788 49.2786096954 254.3480057417 59.2279942583
BXD48 m 207.502 49.2786096954 305.0620057417 109.9419942583
BXD48a m 281.2675 55.0951605578 390.3429023618 172.1920976382
BXD49 m 107.744 49.2786096954 205.3040057417 10.1839942583
BXD51 m 107.36 63.6184115582 233.3094258311 -18.5894258311
BXD53 m 140.8288 49.2786096954 238.3888057417 43.2687942583
BXD55 m 56.6616 49.2786096954 154.2216057417 -40.8984057417
BXD6 m 75.0452 49.2786096954 172.6052057417 -22.5148057417
BXD62 m 75.375 55.0951605578 184.4504023618 -33.7004023618
BXD63 m 37.974 49.2786096954 135.5340057417 -59.5860057417
BXD64 m 105.0292 49.2786096954 202.5892057417 7.4691942583
BXD66 m 67.382 63.6184115582 193.3314258311 -58.5674258311
BXD67 m 18.3382 49.2786096954 115.8982057417 -79.2218057417
BXD69 m 247.9095 55.0951605578 356.9849023618 138.8340976382
BXD73 m 149.6566666667 63.6184115582 275.6060924978 23.7072408355
BXD75 m 165.948 55.0951605578 275.0234023618 56.8725976382
BXD77 m 168.074 49.2786096954 265.6340057417 70.5139942583
BXD79 m 122.828 49.2786096954 220.3880057417 25.2679942583
BXD8 m 51.6466666667 63.6184115582 177.5960924978 -74.3027591645
BXD81 m 174.3948 49.2786096954 271.9548057417 76.8347942583
BXD84 m 55.0944 49.2786096954 152.6544057417 -42.4656057417
BXD87 m 41.322 55.0951605578 150.3974023618 -67.7534023618
BXD89 m 54.2156 49.2786096954 151.7756057417 -43.3444057417
BXD90 m 91.16625 55.0951605578 200.2416523618 -17.9091523618
C57BL/6J m 287.9 77.916323282 442.1559133414 133.6440866586
DBA/2J m 30.78 63.6184115582 156.7294258311 -95.1694258311




  GWAS USING LINEAR MIXED MODELS

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