Project measure / variable:   Schoonjans1   TaMCA_plasma_t60_CD

ID, description, units MPD:112736   TaMCA_plasma_t60_CD   plasma bile acid tauro-α-muricholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min   [ng/mL]  CD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
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  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid tauro-α-muricholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min CD

BXD6C57BL/6JBXD45BXD73BXD53BXD12BXD8BXD48aBXD69BXD75BXD27BXD100BXD79BXD11BXD48BXD40BXD64BXD49BXD32BXD39BXD62BXD51BXD84BXD89BXD66BXD77BXD87BXD34BXD90BXD55BXD67BXD63BXD43BXD1DBA/2JBXD81 ng/mL 050100150200250300350400450femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means60.23   ng/mL
Median of the strain means62.94   ng/mL
SD of the strain means± 29.267
Coefficient of variation (CV)0.4859
Min–max range of strain means13.621   –   142.3   ng/mL
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 137511.0397 3928.8868 1.3471 0.118
Residuals 130 379155.3393 2916.5795


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 20.412 10.047   5 4.4932 0.4922 7.206, 32.296 -1.36
BXD100 m 72.71 14.748   5 6.5954 0.2028 52.0, 85.5 0.43
BXD11 m 72.14 60.43   4 30.213 0.8376 12.906, 154.6 0.41
BXD12 m 89.43 52.0   3 30.02 0.5814 43.728, 146.0 1.0
BXD27 m 73.66 98.88   4 49.438 1.3423 15.58, 221.1 0.46
BXD32 m 62.16 51.09   5 22.848 0.8219 9.256, 131.4 0.07
BXD34 m 29.642 11.768   5 5.2627 0.397 15.504, 42.448 -1.05
BXD39 m 61.9 59.0   3 34.065 0.9532 17.296, 128.8 0.06
BXD40 m 67.75 26.877   4 13.438 0.3967 33.878, 92.22 0.26
BXD43 m 22.195 24.126   7 9.1189 1.087 3.784, 72.98 -1.3
BXD45 m 98.61 26.955   4 13.478 0.2733 69.0, 132.1 1.31
BXD48 m 70.64 71.05   5 31.774 1.0058 23.69, 195.4 0.36
BXD48a m 79.38 86.55   4 43.275 1.0904 5.084, 193.5 0.65
BXD49 m 63.73 21.565   5 9.644 0.3384 37.062, 88.16 0.12
BXD51 m 52.45 24.445   5 10.932 0.4661 26.746, 84.77 -0.27
BXD53 m 95.59 73.0   4 36.499 0.7637 12.376, 169.8 1.21
BXD55 m 28.243 18.61   5 8.3226 0.6589 12.114, 53.83 -1.09
BXD6 m 142.3 181.8   5 81.31 1.2779 9.696, 446.2 2.8
BXD62 m 54.36 30.154   5 13.485 0.5547 26.024, 92.94 -0.2
BXD63 m 23.051 16.296   4 8.1481 0.707 6.874, 37.122 -1.27
BXD64 m 67.25 29.737   5 13.299 0.4422 30.45, 96.34 0.24
BXD66 m 47.825 31.692   5 14.173 0.6627 21.836, 100.8 -0.42
BXD67 m 23.877 23.995   4 11.997 1.0049 7.618, 59.4 -1.24
BXD69 m 78.8 36.452   5 16.302 0.4626 34.202, 124.8 0.63
BXD73 m 95.76 109.9   4 54.97 1.1481 26.324, 257.6 1.21
BXD75 m 75.73 73.06   5 32.674 0.9648 16.01, 168.5 0.53
BXD77 m 44.032 26.55   5 11.874 0.603 12.144, 68.85 -0.55
BXD79 m 72.54 24.197   5 10.821 0.3336 47.79, 111.7 0.42
BXD8 m 86.34 28.945   5 12.945 0.3353 50.97, 129.4 0.89
BXD81 m 13.621 9.8657   3 5.696 0.7243 6.908, 24.948 -1.59
BXD84 m 51.23 18.323   5 8.1944 0.3577 31.386, 72.86 -0.31
BXD87 m 30.023 12.248   5 5.4774 0.4079 12.864, 44.844 -1.03
BXD89 m 50.37 50.39   5 22.535 1.0003 16.154, 138.7 -0.34
BXD90 m 29.536 28.58   5 12.781 0.9676 7.67, 76.24 -1.05
C57BL/6J m 102.4 46.157   5 20.642 0.4507 45.736, 174.7 1.44
DBA/2J m 18.746 14.804   4 7.4019 0.7897 4.282, 38.848 -1.42


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 20.4124 24.1519338084 68.1941126002 -27.3693126002
BXD100 m 72.71 24.1519338084 120.4917126002 24.9282873998
BXD11 m 72.143 27.0026828918 125.5645787277 18.7214212723
BXD12 m 89.426 31.1800124729 151.1119257179 27.7400742821
BXD27 m 73.66175 27.0026828918 127.0833287277 20.2401712723
BXD32 m 62.1624 24.1519338084 109.9441126002 14.3806873998
BXD34 m 29.6416 24.1519338084 77.4233126002 -18.1401126002
BXD39 m 61.8973333333 31.1800124729 123.5832590513 0.2114076154
BXD40 m 67.752 27.0026828918 121.1735787277 14.3304212723
BXD43 m 22.1948571429 20.4121096181 62.5777748451 -18.1880605594
BXD45 m 98.6125 27.0026828918 152.0340787277 45.1909212723
BXD48 m 70.6396 24.1519338084 118.4213126002 22.8578873998
BXD48a m 79.3775 27.0026828918 132.7990787277 25.9559212723
BXD49 m 63.7288 24.1519338084 111.5105126002 15.9470873998
BXD51 m 52.4468 24.1519338084 100.2285126002 4.6650873998
BXD53 m 95.5865 27.0026828918 149.0080787277 42.1649212723
BXD55 m 28.2432 24.1519338084 76.0249126002 -19.5385126002
BXD6 m 142.2744 24.1519338084 190.0561126002 94.4926873998
BXD62 m 54.3624 24.1519338084 102.1441126002 6.5806873998
BXD63 m 23.051 27.0026828918 76.4725787277 -30.3705787277
BXD64 m 67.25 24.1519338084 115.0317126002 19.4682873998
BXD66 m 47.8248 24.1519338084 95.6065126002 0.0430873998
BXD67 m 23.8775 27.0026828918 77.2990787277 -29.5440787277
BXD69 m 78.8004 24.1519338084 126.5821126002 31.0186873998
BXD73 m 95.759 27.0026828918 149.1805787277 42.3374212723
BXD75 m 75.7264 24.1519338084 123.5081126002 27.9446873998
BXD77 m 44.0324 24.1519338084 91.8141126002 -3.7493126002
BXD79 m 72.536 24.1519338084 120.3177126002 24.7542873998
BXD8 m 86.336 24.1519338084 134.1177126002 38.5542873998
BXD81 m 13.6206666667 31.1800124729 75.3065923846 -48.0652590513
BXD84 m 51.2276 24.1519338084 99.0093126002 3.4458873998
BXD87 m 30.0232 24.1519338084 77.8049126002 -17.7585126002
BXD89 m 50.3732 24.1519338084 98.1549126002 2.5914873998
BXD90 m 29.536 24.1519338084 77.3177126002 -18.2457126002
C57BL/6J m 102.4032 24.1519338084 150.1849126002 54.6214873998
DBA/2J m 18.7465 27.0026828918 72.1680787277 -34.6750787277




  GWAS USING LINEAR MIXED MODELS

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