Project measure / variable:   Schoonjans1   MCA_plasma_t60_HFD

ID, description, units MPD:112735   MCA_plasma_t60_HFD   plasma bile acid γ-muricholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min   [ng/mL]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   5 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid γ-muricholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means2.8005   ng/mL
Median of the strain means1.802   ng/mL
SD of the strain means± 1.9716
Coefficient of variation (CV)0.704
Min–max range of strain means1.345   –   6.136   ng/mL
Mean sample size per strain1.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 2 3.2129 1.6065 0.7844 0.5321
Residuals 3 6.1438 2.0479


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD11 m 6.136 0.0   1   0.0 0.0 6.136, 6.136 1.69
BXD40 m 1.345 0.14284   2   0.101 0.1062 1.244, 1.446 -0.74
BXD49 m 1.802 0.0   1   0.0 0.0 1.802, 1.802 -0.51
BXD6 m 1.6816 0.51138   2   0.3616 0.3041 1.32, 2.0432 -0.57
BXD77 m 3.038 2.4211   2   1.712 0.7969 1.326, 4.75 0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD40 m 1.345 1.0119123085 4.5653565873 -1.8753565873
BXD6 m 1.6816 1.0119123085 4.9019565873 -1.5387565873
BXD77 m 3.038 1.0119123085 6.2583565873 -0.1823565873




GWAS analysis not available: SNP data is not available for enough strains (at least 4)