Project measure / variable:   Schoonjans1   DCA_plasma_t60_CD

ID, description, units MPD:112730   DCA_plasma_t60_CD   plasma bile acid deoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min   [ng/mL]  CD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid deoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min CD

BXD87BXD73C57BL/6JBXD48BXD62BXD79BXD1BXD75BXD63BXD55BXD69BXD32BXD81BXD49BXD45BXD84BXD51BXD53BXD27DBA/2JBXD48aBXD89BXD39BXD77BXD11BXD34BXD8BXD100BXD40BXD90BXD66BXD67BXD12BXD64BXD43BXD6 ng/mL 020406080100120140160180200220240260femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means45.249   ng/mL
Median of the strain means35.662   ng/mL
SD of the strain means± 36.547
Coefficient of variation (CV)0.8077
Min–max range of strain means0.236   –   144.9   ng/mL
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 211964.1037 6234.2383 7.7683 < 0.0001
Residuals 125 100315.4842 802.5239


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 79.09 13.679   5 6.1173 0.173 64.27, 100.1 0.93
BXD100 m 14.714 5.1092   5 2.2849 0.3472 8.032, 21.818 -0.84
BXD11 m 16.587 9.9861   4 4.9931 0.602 7.93, 29.44 -0.78
BXD12 m 8.0987 1.696   3 0.9792 0.2094 7.064, 10.056 -1.02
BXD27 m 35.48 27.113   4 13.556 0.7642 14.806, 74.63 -0.27
BXD32 m 63.89 28.12   5 12.576 0.4401 31.014, 101.1 0.51
BXD34 m 15.709 0.92782   5 0.41493 0.0591 14.66, 17.012 -0.81
BXD39 m 20.361 2.5131   3 1.4509 0.1234 18.072, 23.05 -0.68
BXD40 m 14.371 4.1002   4 2.0501 0.2853 8.586, 17.404 -0.84
BXD43 m 7.2117 3.4866   7 1.3178 0.4835 1.558, 11.94 -1.04
BXD45 m 52.03 15.871   4 7.9356 0.305 35.506, 69.47 0.19
BXD48 m 98.1 41.508   5 18.563 0.4231 52.17, 161.2 1.45
BXD48a m 23.864 11.722   4 5.8611 0.4912 9.026, 35.43 -0.59
BXD49 m 59.69 37.226   5 16.648 0.6237 25.02, 120.2 0.4
BXD51 m 37.471 22.426   4 11.213 0.5985 16.052, 68.18 -0.21
BXD53 m 35.845 17.71   4 8.8551 0.4941 21.526, 61.68 -0.26
BXD55 m 68.27 18.761   5 8.3901 0.2748 53.64, 101.0 0.63
BXD6 m 0.236 0.0   1   0.0 0.0 0.236, 0.236 -1.23
BXD62 m 83.66 43.244   5 19.339 0.5169 22.488, 129.6 1.05
BXD63 m 69.58 25.874   4 12.937 0.3719 36.05, 94.9 0.67
BXD64 m 7.656 1.9866   5 0.88845 0.2595 5.268, 10.402 -1.03
BXD66 m 10.861 5.5161   5 2.4669 0.5079 4.992, 17.924 -0.94
BXD67 m 10.597 7.9221   4 3.9611 0.7476 3.254, 20.33 -0.95
BXD69 m 64.53 41.385   5 18.508 0.6414 26.568, 131.4 0.53
BXD73 m 115.4 28.383   4 14.191 0.2461 85.29, 142.8 1.92
BXD75 m 70.79 16.481   5 7.3707 0.2328 56.17, 89.49 0.7
BXD77 m 16.684 12.884   5 5.7621 0.7723 5.404, 38.584 -0.78
BXD79 m 83.26 70.68   5 31.607 0.8488 4.86, 187.1 1.04
BXD8 m 15.457 7.6776   5 3.4335 0.4967 4.29, 25.78 -0.82
BXD81 m 62.56 57.93   3 33.447 0.926 20.816, 128.7 0.47
BXD84 m 41.78 15.459   5 6.9133 0.37 29.572, 65.55 -0.09
BXD87 m 144.9 61.89   5 27.677 0.4272 104.0, 253.6 2.73
BXD89 m 20.765 16.721   5 7.4777 0.8052 6.904, 47.62 -0.67
BXD90 m 11.083 13.783   5 6.1641 1.2437 3.362, 35.514 -0.93
C57BL/6J m 114.7 45.236   5 20.23 0.3944 54.74, 168.4 1.9
DBA/2J m 33.7 26.397   4 13.198 0.7833 8.288, 70.13 -0.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 79.088 12.669047902 104.1616181462 54.0143818538
BXD100 m 14.7144 12.669047902 39.7880181462 -10.3592181462
BXD11 m 16.587 14.1644261595 44.6201573084 -11.4461573084
BXD12 m 8.0986666667 16.3556705122 40.4685685031 -24.2712351698
BXD27 m 35.48025 14.1644261595 63.5134073084 7.4470926916
BXD32 m 63.8948 12.669047902 88.9684181462 38.8211818538
BXD34 m 15.7092 12.669047902 40.7828181462 -9.3644181462
BXD39 m 20.3606666667 16.3556705122 52.7305685031 -12.0092351698
BXD40 m 14.3715 14.1644261595 42.4046573084 -13.6616573084
BXD43 m 7.2117142857 10.7072997377 28.4027893434 -13.979360772
BXD45 m 52.031 14.1644261595 80.0641573084 23.9978426916
BXD48 m 98.102 12.669047902 123.1756181462 73.0283818538
BXD48a m 23.8635 14.1644261595 51.8966573084 -4.1696573084
BXD49 m 59.6896 12.669047902 84.7632181462 34.6159818538
BXD51 m 37.471 14.1644261595 65.5041573084 9.4378426916
BXD53 m 35.845 14.1644261595 63.8781573084 7.8118426916
BXD55 m 68.272 12.669047902 93.3456181462 43.1983818538
BXD62 m 83.6616 12.669047902 108.7352181462 58.5879818538
BXD63 m 69.575 14.1644261595 97.6081573084 41.5418426916
BXD64 m 7.656 12.669047902 32.7296181462 -17.4176181462
BXD66 m 10.8612 12.669047902 35.9348181462 -14.2124181462
BXD67 m 10.597 14.1644261595 38.6301573084 -17.4361573084
BXD69 m 64.5272 12.669047902 89.6008181462 39.4535818538
BXD73 m 115.35 14.1644261595 143.3831573084 87.3168426916
BXD75 m 70.792 12.669047902 95.8656181462 45.7183818538
BXD77 m 16.684 12.669047902 41.7576181462 -8.3896181462
BXD79 m 83.2648 12.669047902 108.3384181462 58.1911818538
BXD8 m 15.4572 12.669047902 40.5308181462 -9.6164181462
BXD81 m 62.56 16.3556705122 94.9299018365 30.1900981635
BXD84 m 41.7804 12.669047902 66.8540181462 16.7067818538
BXD87 m 144.88 12.669047902 169.9536181462 119.8063818538
BXD89 m 20.7652 12.669047902 45.8388181462 -4.3084181462
BXD90 m 11.0828 12.669047902 36.1564181462 -13.9908181462
C57BL/6J m 114.708 12.669047902 139.7816181462 89.6343818538
DBA/2J m 33.7005 14.1644261595 61.7336573084 5.6673426916




  GWAS USING LINEAR MIXED MODELS

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