Project measure / variable:   Schoonjans1   keto_DCA_plasma_t60_HFD

ID, description, units MPD:112721   keto_DCA_plasma_t60_HFD   plasma bile acid 7-ketodeoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min   [ng/mL]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   35 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid 7-ketodeoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min HFD

BXD49BXD62BXD6BXD55BXD39BXD69BXD64BXD1BXD12BXD75BXD77BXD48aC57BL/6JBXD81BXD40BXD87BXD73BXD48BXD27BXD11BXD8BXD89BXD45BXD32BXD53BXD84BXD79BXD51BXD90BXD34BXD63BXD67BXD100BXD66DBA/2J ng/mL 051015202530354045femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested35 strains
Mean of the strain means1.4937   ng/mL
Median of the strain means0.948   ng/mL
SD of the strain means± 1.875
Coefficient of variation (CV)1.2552
Min–max range of strain means0.212   –   10.484   ng/mL
Mean sample size per strain3.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 31 522.8682 16.8667 0.891 0.632
Residuals 84 1590.111 18.9299


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 35 (35)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 1.846 1.772   4 0.88598 0.9599 0.542, 4.45 0.19
BXD100 m 0.366 0.24619   5 0.1101 0.6726 0.208, 0.802 -0.6
BXD11 m 0.73133 0.72374   3 0.41785 0.9896 0.278, 1.566 -0.41
BXD12 m 1.7707 0.954   3 0.55079 0.5388 0.68, 2.45 0.15
BXD27 m 0.83733 0.67424   3 0.38927 0.8052 0.278, 1.586 -0.35
BXD32 m 0.6165 0.47937   4 0.23969 0.7776 0.208, 1.19 -0.47
BXD34 m 0.43933 0.26746   3 0.15442 0.6088 0.276, 0.748 -0.56
BXD39 m 2.315 1.7126   2   1.211 0.7398 1.104, 3.526 0.44
BXD40 m 1.0535 0.39139   4 0.19569 0.3715 0.64, 1.552 -0.23
BXD45 m 0.6304 0.35792   5 0.16007 0.5678 0.25, 1.202 -0.46
BXD48 m 0.948 1.3297   5 0.59465 1.4026 0.222, 3.31 -0.29
BXD48a m 1.3995 0.66526   4 0.33263 0.4754 0.56, 2.17 -0.05
BXD49 m 10.484 18.358   5 8.2101 1.7512 1.148, 43.264 4.79
BXD51 m 0.496 0.0   1   0.0 0.0 0.496, 0.496 -0.53
BXD53 m 0.5955 0.39049   4 0.19524 0.6557 0.216, 1.138 -0.48
BXD55 m 2.4548 2.5149   5 1.1247 1.0245 0.464, 6.316 0.51
BXD6 m 4.146 3.6285   4 1.8143 0.8752 0.292, 8.6159 1.41
BXD62 m 4.9007 6.3769   3 3.6817 1.3012 0.29, 12.178 1.82
BXD63 m 0.41486 0.01993   3 0.0115 0.048 0.392, 0.42857 -0.58
BXD64 m 2.082 0.0   1   0.0 0.0 2.082, 2.082 0.31
BXD66 m 0.29267 0.11976   3 0.06914 0.4092 0.21, 0.43 -0.64
BXD67 m 0.38125 0.25633   2   0.18125 0.6723 0.2, 0.5625 -0.59
BXD69 m 2.115 2.5021   4 1.2511 1.183 0.372, 5.78 0.33
BXD73 m 0.96133 0.49894   3 0.28807 0.519 0.424, 1.41 -0.28
BXD75 m 1.7087 1.1921   3 0.68827 0.6977 0.382, 2.69 0.11
BXD77 m 1.6776 3.0792   5 1.377 1.8355 0.25, 7.184 0.1
BXD79 m 0.5732 0.55752   5 0.24933 0.9726 0.272, 1.568 -0.49
BXD8 m 0.702 0.42992   2   0.304 0.6124 0.398, 1.006 -0.42
BXD81 m 1.0828 0.81632   5 0.36507 0.7539 0.224, 2.068 -0.22
BXD84 m 0.57933 0.14643   3 0.08454 0.2528 0.412, 0.684 -0.49
BXD87 m 1.044 1.166   4 0.58298 1.1168 0.34, 2.778 -0.24
BXD89 m 0.69 0.37139   4 0.1857 0.5383 0.308, 1.144 -0.43
BXD90 m 0.446 0.23193   2   0.164 0.52 0.282, 0.61 -0.56
C57BL/6J m 1.287 0.03818   2   0.027 0.0297 1.26, 1.314 -0.11
DBA/2J m 0.212 0.0   1   0.0 0.0 0.212, 0.212 -0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 1.846 2.1754248622 6.1720709107 -2.4800709107
BXD100 m 0.366 1.9457591487 4.2353554527 -3.5033554527
BXD11 m 0.7313333333 2.5119642596 5.726649743 -4.2639830763
BXD12 m 1.7706666667 2.5119642596 6.7659830763 -3.224649743
BXD27 m 0.8373333333 2.5119642596 5.832649743 -4.1579830763
BXD32 m 0.6165 2.1754248622 4.9425709107 -3.7095709107
BXD34 m 0.4393333333 2.5119642596 5.434649743 -4.5559830763
BXD39 m 2.315 3.076515344 8.4329881537 -3.8029881537
BXD40 m 1.0535 2.1754248622 5.3795709107 -3.2725709107
BXD45 m 0.6304 1.9457591487 4.4997554527 -3.2389554527
BXD48 m 0.948 1.9457591487 4.8173554527 -2.9213554527
BXD48a m 1.3995 2.1754248622 5.7255709107 -2.9265709107
BXD49 m 10.4836 1.9457591487 14.3529554527 6.6142445473
BXD53 m 0.5955 2.1754248622 4.9215709107 -3.7305709107
BXD55 m 2.4548 1.9457591487 6.3241554527 -1.4145554527
BXD6 m 4.145975 2.1754248622 8.4720459107 -0.1800959107
BXD62 m 4.9006666667 2.5119642596 9.8959830763 -0.094649743
BXD63 m 0.4148566667 2.5119642596 5.4101730763 -4.580459743
BXD66 m 0.2926666667 2.5119642596 5.2879830763 -4.702649743
BXD67 m 0.38125 3.076515344 6.4992381537 -5.7367381537
BXD69 m 2.115 2.1754248622 6.4410709107 -2.2110709107
BXD73 m 0.9613333333 2.5119642596 5.956649743 -4.0339830763
BXD75 m 1.7086666667 2.5119642596 6.7039830763 -3.286649743
BXD77 m 1.6776 1.9457591487 5.5469554527 -2.1917554527
BXD79 m 0.5732 1.9457591487 4.4425554527 -3.2961554527
BXD8 m 0.702 3.076515344 6.8199881537 -5.4159881537
BXD81 m 1.0828 1.9457591487 4.9521554527 -2.7865554527
BXD84 m 0.5793333333 2.5119642596 5.574649743 -4.4159830763
BXD87 m 1.044 2.1754248622 5.3700709107 -3.2820709107
BXD89 m 0.69 2.1754248622 5.0160709107 -3.6360709107
BXD90 m 0.446 3.076515344 6.5639881537 -5.6719881537
C57BL/6J m 1.287 3.076515344 7.4049881537 -4.8309881537




  GWAS USING LINEAR MIXED MODELS

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