Project measure / variable:   Schoonjans1   TDCA_plasma_t30_CD

ID, description, units MPD:112708   TDCA_plasma_t30_CD   plasma bile acid taurodeoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min   [ng/mL]  CD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid taurodeoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min CD

C57BL/6JBXD87BXD79BXD48BXD45BXD75BXD73BXD63BXD32BXD49BXD62BXD55BXD1BXD84BXD81BXD11DBA/2JBXD69BXD40BXD8BXD53BXD27BXD89BXD100BXD51BXD48aBXD39BXD12BXD77BXD43BXD64BXD66BXD90BXD34BXD67BXD6 ng/mL 050100150200250300350femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means44.048   ng/mL
Median of the strain means32.029   ng/mL
SD of the strain means± 36.049
Coefficient of variation (CV)0.8184
Min–max range of strain means1.564   –   148.3   ng/mL
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 207666.8877 6107.8496 5.0219 < 0.0001
Residuals 123 149596.711 1216.2334


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 52.41 21.093   5 9.4329 0.4024 23.484, 72.09 0.23
BXD100 m 22.81 5.2084   5 2.3293 0.2283 15.986, 28.906 -0.59
BXD11 m 38.375 31.967   4 15.983 0.833 10.026, 84.23 -0.16
BXD12 m 18.893 6.4922   3 3.7483 0.3436 12.012, 24.91 -0.7
BXD27 m 24.85 8.8361   4 4.418 0.3556 17.284, 34.772 -0.53
BXD32 m 62.13 33.183   5 14.84 0.5341 35.032, 105.9 0.5
BXD34 m 6.246 2.2712   5 1.0157 0.3636 3.56, 9.292 -1.05
BXD39 m 19.254 8.655   3 4.997 0.4495 10.608, 27.918 -0.69
BXD40 m 30.955 22.863   4 11.431 0.7386 11.12, 63.74 -0.36
BXD43 m 10.473 8.5008   7 3.213 0.8117 1.892, 24.24 -0.93
BXD45 m 85.69 31.05   4 15.525 0.3624 56.3, 113.7 1.16
BXD48 m 101.4 31.04   5 13.882 0.3062 61.2, 139.4 1.59
BXD48a m 22.21 17.733   4 8.8667 0.7984 11.24, 48.666 -0.61
BXD49 m 61.29 30.139   5 13.478 0.4918 20.306, 93.71 0.48
BXD51 m 22.233 12.527   5 5.6021 0.5634 13.034, 42.326 -0.61
BXD53 m 27.512 12.531   4 6.2654 0.4555 16.99, 45.37 -0.46
BXD55 m 58.87 30.697   5 13.728 0.5214 11.822, 88.85 0.41
BXD6 m 1.564 0.0   1   0.0 0.0 1.564, 1.564 -1.18
BXD62 m 60.64 21.241   5 9.4993 0.3503 33.152, 79.25 0.46
BXD63 m 63.14 33.768   4 16.884 0.5348 27.564, 104.9 0.53
BXD64 m 10.271 9.4079   4 4.7039 0.916 2.15, 23.448 -0.94
BXD66 m 9.7336 3.9199   5 1.753 0.4027 3.716, 14.426 -0.95
BXD67 m 3.9493 1.8033   3 1.0411 0.4566 1.874, 5.134 -1.11
BXD69 m 33.104 28.219   5 12.62 0.8524 12.314, 82.57 -0.3
BXD73 m 74.7 41.254   3 23.818 0.5523 29.486, 110.3 0.85
BXD75 m 81.29 35.7   5 15.965 0.4392 38.418, 122.3 1.03
BXD77 m 12.517 4.0881   5 1.8283 0.3266 8.15, 18.856 -0.87
BXD79 m 114.3 137.3   5 61.42 1.2015 8.98, 351.5 1.95
BXD8 m 29.339 19.107   5 8.5451 0.6513 18.13, 63.19 -0.41
BXD81 m 38.46 23.35   3 13.481 0.6071 12.992, 58.86 -0.15
BXD84 m 50.24 23.445   5 10.485 0.4666 25.192, 83.0 0.17
BXD87 m 120.7 41.601   5 18.604 0.3447 84.39, 192.1 2.13
BXD89 m 23.468 9.4628   5 4.2319 0.4032 13.748, 39.212 -0.57
BXD90 m 9.204 4.272   5 1.9105 0.4641 5.846, 16.394 -0.97
C57BL/6J m 148.3 56.01   5 25.046 0.3775 103.8, 244.6 2.89
DBA/2J m 35.191 37.19   4 18.595 1.0568 6.702, 89.9 -0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 52.4112 15.5963676694 83.2832535118 21.5391464882
BXD100 m 22.8096 15.5963676694 53.6816535118 -8.0624535118
BXD11 m 38.375 17.4372691554 72.8910051287 3.8589948713
BXD12 m 18.8926666667 20.1348240817 58.7483163714 -20.9629830381
BXD27 m 24.8505 17.4372691554 59.3665051287 -9.6655051287
BXD32 m 62.1336 15.5963676694 93.0056535118 31.2615464882
BXD34 m 6.246 15.5963676694 37.1180535118 -24.6260535118
BXD39 m 19.254 20.1348240817 59.1096497048 -20.6016497048
BXD40 m 30.955 17.4372691554 65.4710051287 -3.5610051287
BXD43 m 10.4731428571 13.1813364941 36.5647902348 -15.6185045205
BXD45 m 85.685 17.4372691554 120.2010051287 51.1689948713
BXD48 m 101.382 15.5963676694 132.2540535118 70.5099464882
BXD48a m 22.21 17.4372691554 56.7260051287 -12.3060051287
BXD49 m 61.288 15.5963676694 92.1600535118 30.4159464882
BXD51 m 22.2328 15.5963676694 53.1048535118 -8.6392535118
BXD53 m 27.5125 17.4372691554 62.0285051287 -7.0035051287
BXD55 m 58.8692 15.5963676694 89.7412535118 27.9971464882
BXD62 m 60.6448 15.5963676694 91.5168535118 29.7727464882
BXD63 m 63.1355 17.4372691554 97.6515051287 28.6194948713
BXD64 m 10.271 17.4372691554 44.7870051287 -24.2450051287
BXD66 m 9.7336 15.5963676694 40.6056535118 -21.1384535118
BXD67 m 3.9493333333 20.1348240817 43.8049830381 -35.9063163714
BXD69 m 33.1036 15.5963676694 63.9756535118 2.2315464882
BXD73 m 74.6953333333 20.1348240817 114.5509830381 34.8396836286
BXD75 m 81.2908 15.5963676694 112.1628535118 50.4187464882
BXD77 m 12.5168 15.5963676694 43.3888535118 -18.3552535118
BXD79 m 114.3056 15.5963676694 145.1776535118 83.4335464882
BXD8 m 29.3388 15.5963676694 60.2108535118 -1.5332535118
BXD81 m 38.46 20.1348240817 78.3156497048 -1.3956497048
BXD84 m 50.2436 15.5963676694 81.1156535118 19.3715464882
BXD87 m 120.678 15.5963676694 151.5500535118 89.8059464882
BXD89 m 23.4676 15.5963676694 54.3396535118 -7.4044535118
BXD90 m 9.204 15.5963676694 40.0760535118 -21.6680535118
C57BL/6J m 148.34 15.5963676694 179.2120535118 117.4679464882
DBA/2J m 35.1905 17.4372691554 69.7065051287 0.6744948713




  GWAS USING LINEAR MIXED MODELS

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