Project measure / variable:   Schoonjans1   TCA_plasma_t30_HFD

ID, description, units MPD:112705   TCA_plasma_t30_HFD   plasma bile acid taurocholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min   [ng/mL]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid taurocholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min HFD

C57BL/6JBXD69BXD48aBXD51BXD75BXD84BXD81BXD64BXD27BXD6BXD79BXD12BXD40BXD39BXD63BXD100BXD32BXD77BXD34BXD67BXD48BXD8BXD53BXD11BXD62BXD43DBA/2JBXD90BXD55BXD87BXD89BXD1BXD73BXD66BXD45BXD49 ng/mL 01002003004005006007008009001,0001,1001,200femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means246.8   ng/mL
Median of the strain means190.9   ng/mL
SD of the strain means± 166.2
Coefficient of variation (CV)0.6736
Min–max range of strain means75.94   –   786.5   ng/mL
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 3677177.6578 105062.2188 2.6288 < 0.0001
Residuals 122 4875891.9823 39966.3277


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 94.37 65.31   5 29.208 0.6921 35.662, 199.4 -0.92
BXD100 m 212.4 165.0   9 55.0 0.777 34.66, 552.1 -0.21
BXD11 m 148.5 55.06   3 31.786 0.3707 106.3, 210.8 -0.59
BXD12 m 323.2 419.9   4 209.9 1.299 49.912, 947.5 0.46
BXD27 m 334.9 171.3   5 76.59 0.5115 161.7, 561.5 0.53
BXD32 m 192.2 124.3   4 62.16 0.6469 109.5, 376.9 -0.33
BXD34 m 190.9 122.0   4 60.98 0.6388 79.45, 301.3 -0.34
BXD39 m 226.0 196.1   3 113.2 0.8677 46.38, 435.2 -0.12
BXD40 m 259.2 162.7   4 81.33 0.6276 149.6, 500.1 0.07
BXD43 m 129.7 19.777   5 8.8445 0.1525 100.9, 147.5 -0.7
BXD45 m 87.82 41.421   5 18.524 0.4717 47.004, 153.9 -0.96
BXD48 m 157.8 73.16   5 32.719 0.4636 80.75, 248.5 -0.54
BXD48a m 540.1 82.68   4 41.339 0.1531 419.1, 597.7 1.77
BXD49 m 75.94 18.022   5 8.0595 0.2373 51.54, 93.35 -1.03
BXD51 m 491.2 249.1   3 143.8 0.507 297.9, 772.3 1.47
BXD53 m 154.9 100.7   5 45.016 0.6498 65.05, 293.6 -0.55
BXD55 m 120.7 12.719   5 5.688 0.1054 106.1, 132.4 -0.76
BXD6 m 331.6 225.1   5 100.7 0.6788 137.9, 668.1 0.51
BXD62 m 147.2 55.61   4 27.805 0.3778 76.69, 211.3 -0.6
BXD63 m 214.6 67.63   5 30.244 0.3151 145.7, 293.6 -0.19
BXD64 m 343.9 90.86   5 40.634 0.2642 244.1, 440.6 0.58
BXD66 m 90.57 64.19   3 37.061 0.7087 41.43, 163.2 -0.94
BXD67 m 164.8 57.23   5 25.594 0.3474 100.4, 244.5 -0.49
BXD69 m 556.4 493.7   4 246.8 0.8873 80.28, 1230.0 1.86
BXD73 m 92.52 51.09   3 29.499 0.5523 61.88, 151.5 -0.93
BXD75 m 474.3 368.7   4 184.3 0.7774 151.2, 813.1 1.37
BXD77 m 191.0 41.235   5 18.441 0.2159 122.8, 228.1 -0.34
BXD79 m 330.8 458.1   5 204.9 1.3849 97.07, 1149.0 0.51
BXD8 m 155.4 113.0   3 65.22 0.7271 53.08, 276.6 -0.55
BXD81 m 390.1 284.9   5 127.4 0.7302 202.1, 872.2 0.86
BXD84 m 426.3 352.7   5 157.8 0.8275 141.8, 1017.0 1.08
BXD87 m 100.4 34.507   4 17.253 0.3438 72.39, 150.7 -0.88
BXD89 m 97.75 75.79   5 33.894 0.7753 47.958, 230.7 -0.9
BXD90 m 123.0 111.4   4 55.72 0.9062 49.258, 287.6 -0.74
C57BL/6J m 786.5 393.6   3 227.2 0.5004 394.9, 1182.0 3.25
DBA/2J m 126.1 118.7   3 68.53 0.941 31.74, 259.4 -0.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 94.3708 89.4050644246 271.3570546709 -82.6154546709
BXD100 m 212.3544444444 66.6386005287 344.2722099535 80.4366789353
BXD11 m 148.5333333333 115.421441861 377.0216056161 -79.9549389494
BXD12 m 323.228 99.957900793 521.1046482636 125.3513517363
BXD27 m 334.86 89.4050644246 511.8462546709 157.8737453291
BXD32 m 192.175 99.957900793 390.0516482636 -5.7016482637
BXD34 m 190.9225 99.957900793 388.7991482636 -6.9541482636
BXD39 m 225.9933333333 115.421441861 454.4816056161 -2.4949389494
BXD40 m 259.175 99.957900793 457.0516482636 61.2983517364
BXD43 m 129.66 89.4050644246 306.6462546709 -47.3262546709
BXD45 m 87.8168 89.4050644246 264.8030546709 -89.1694546709
BXD48 m 157.798 89.4050644246 334.7842546709 -19.1882546709
BXD48a m 540.1 99.957900793 737.9766482636 342.2233517364
BXD49 m 75.944 89.4050644246 252.9302546709 -101.0422546709
BXD51 m 491.2333333333 115.421441861 719.721605616 262.7450610506
BXD53 m 154.906 89.4050644246 331.8922546709 -22.0802546709
BXD55 m 120.72 89.4050644246 297.7062546709 -56.2662546709
BXD6 m 331.64 89.4050644246 508.6262546709 154.6537453291
BXD62 m 147.1975 99.957900793 345.0741482636 -50.6791482636
BXD63 m 214.6 89.4050644246 391.5862546709 37.6137453291
BXD64 m 343.92 89.4050644246 520.9062546709 166.9337453291
BXD66 m 90.5733333333 115.421441861 319.0616056161 -137.9149389494
BXD67 m 164.76 89.4050644246 341.7462546709 -12.2262546709
BXD69 m 556.395 99.957900793 754.2716482637 358.5183517364
BXD73 m 92.5166666667 115.421441861 321.0049389494 -135.9716056161
BXD75 m 474.275 99.957900793 672.1516482636 276.3983517364
BXD77 m 190.96 89.4050644246 367.9462546709 13.9737453291
BXD79 m 330.774 89.4050644246 507.7602546709 153.7877453291
BXD8 m 155.36 115.421441861 383.8482722827 -73.1282722827
BXD81 m 390.1 89.4050644246 567.0862546709 213.1137453291
BXD84 m 426.26 89.4050644246 603.2462546709 249.2737453291
BXD87 m 100.37 99.957900793 298.2466482636 -97.5066482636
BXD89 m 97.7496 89.4050644246 274.7358546709 -79.2366546709
BXD90 m 122.9895 99.957900793 320.8661482636 -74.8871482636
C57BL/6J m 786.5333333333 115.421441861 1015.0216056161 558.0450610506
DBA/2J m 126.1433333333 115.421441861 354.6316056161 -102.3449389494




  GWAS USING LINEAR MIXED MODELS

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