Project measure / variable:   Schoonjans1   TCA_plasma_t30_CD

ID, description, units MPD:112704   TCA_plasma_t30_CD   plasma bile acid taurocholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min   [ng/mL]  CD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
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  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid taurocholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min CD

BXD79BXD39BXD51BXD62BXD8BXD32BXD40C57BL/6JBXD6BXD75BXD87BXD100BXD45BXD53BXD49BXD63BXD27BXD73BXD34BXD1BXD12BXD55BXD64BXD84BXD11BXD48DBA/2JBXD69BXD43BXD81BXD66BXD77BXD67BXD89BXD48aBXD90 ng/mL 02004006008001,0001,200femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means191.6   ng/mL
Median of the strain means166.8   ng/mL
SD of the strain means± 100.5
Coefficient of variation (CV)0.5247
Min–max range of strain means52.31   –   481.7   ng/mL
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 1626951.6205 46484.332 2.6055 < 0.0001
Residuals 130 2319334.5493 17841.035


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 157.6 25.513   5 11.41 0.1619 122.2, 184.8 -0.34
BXD100 m 225.7 60.9   5 27.234 0.2698 178.6, 328.1 0.34
BXD11 m 129.6 98.34   4 49.172 0.7591 43.78, 245.4 -0.62
BXD12 m 155.1 51.41   3 29.681 0.3314 113.8, 212.7 -0.36
BXD27 m 172.8 94.82   4 47.41 0.5488 67.66, 292.3 -0.19
BXD32 m 263.1 149.1   5 66.67 0.5667 134.7, 498.5 0.71
BXD34 m 164.9 65.25   5 29.181 0.3957 93.81, 232.3 -0.27
BXD39 m 409.6 91.24   3 52.68 0.2227 316.9, 499.3 2.17
BXD40 m 254.9 47.364   4 23.682 0.1858 212.6, 317.0 0.63
BXD43 m 123.2 108.6   7 41.058 0.8821 24.36, 303.4 -0.68
BXD45 m 222.9 87.39   4 43.696 0.3921 139.7, 339.5 0.31
BXD48 m 129.5 51.53   5 23.047 0.398 83.16, 208.8 -0.62
BXD48a m 62.67 58.2   4 29.099 0.9287 21.676, 148.7 -1.28
BXD49 m 182.0 81.14   5 36.285 0.4459 64.67, 271.9 -0.1
BXD51 m 386.1 204.0   5 91.24 0.5284 85.8, 601.8 1.94
BXD53 m 193.7 187.7   4 93.86 0.9691 85.28, 474.8 0.02
BXD55 m 138.8 58.52   5 26.171 0.4216 53.11, 216.4 -0.53
BXD6 m 245.9 168.5   5 75.36 0.6853 78.66, 490.8 0.54
BXD62 m 385.7 138.6   5 62.0 0.3594 215.5, 552.2 1.93
BXD63 m 172.9 139.4   4 69.72 0.8066 56.1, 363.9 -0.19
BXD64 m 135.4 105.2   5 47.042 0.7771 66.73, 312.9 -0.56
BXD66 m 112.8 36.588   5 16.362 0.3245 63.62, 151.4 -0.78
BXD67 m 86.06 40.723   4 20.361 0.4732 51.92, 138.6 -1.05
BXD69 m 124.1 83.37   5 37.285 0.672 50.33, 243.4 -0.67
BXD73 m 168.7 128.6   4 64.28 0.7619 0.936, 312.9 -0.23
BXD75 m 238.4 155.9   5 69.72 0.6538 88.14, 471.0 0.47
BXD77 m 103.1 27.19   5 12.16 0.2636 65.94, 136.4 -0.88
BXD79 m 481.7 498.5   5 223.0 1.035 100.1, 1318.0 2.89
BXD8 m 287.8 120.9   5 54.08 0.4201 107.2, 408.6 0.96
BXD81 m 116.0 49.609   3 28.642 0.4275 60.62, 156.3 -0.75
BXD84 m 134.6 73.6   5 32.916 0.5469 80.19, 258.1 -0.57
BXD87 m 230.4 116.5   5 52.11 0.5058 164.0, 435.9 0.39
BXD89 m 71.28 31.805   5 14.223 0.4462 32.618, 109.7 -1.2
BXD90 m 52.31 24.862   5 11.118 0.4753 26.414, 85.68 -1.39
C57BL/6J m 249.0 97.83   5 43.751 0.393 137.6, 405.7 0.57
DBA/2J m 128.5 91.75   4 45.875 0.7138 25.774, 249.1 -0.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 157.58 59.7344707761 275.7575065131 39.4024934869
BXD100 m 225.7 59.7344707761 343.8775065131 107.5224934869
BXD11 m 129.55 66.7851686276 261.6764689874 -2.5764689874
BXD12 m 155.1333333333 77.1168701701 307.6998382072 2.5668284594
BXD27 m 172.79 66.7851686276 304.9164689874 40.6635310126
BXD32 m 263.08 59.7344707761 381.2575065131 144.9024934869
BXD34 m 164.922 59.7344707761 283.0995065131 46.7444934869
BXD39 m 409.6333333333 77.1168701701 562.1998382072 257.0668284594
BXD40 m 254.875 66.7851686276 387.0014689874 122.7485310126
BXD43 m 123.1545714286 50.4848421304 223.0327938714 23.2763489858
BXD45 m 222.9 66.7851686276 355.0264689874 90.7735310126
BXD48 m 129.49 59.7344707761 247.6675065131 11.3124934869
BXD48a m 62.6685 66.7851686276 194.7949689874 -69.4579689874
BXD49 m 181.974 59.7344707761 300.1515065131 63.7964934869
BXD51 m 386.1 59.7344707761 504.2775065131 267.9224934869
BXD53 m 193.695 66.7851686276 325.8214689874 61.5685310126
BXD55 m 138.802 59.7344707761 256.9795065131 20.6244934869
BXD6 m 245.912 59.7344707761 364.0895065131 127.7344934869
BXD62 m 385.72 59.7344707761 503.8975065131 267.5424934869
BXD63 m 172.8725 66.7851686276 304.9989689874 40.7460310126
BXD64 m 135.368 59.7344707761 253.5455065131 17.1904934869
BXD66 m 112.758 59.7344707761 230.9355065131 -5.4195065131
BXD67 m 86.0625 66.7851686276 218.1889689874 -46.0639689874
BXD69 m 124.064 59.7344707761 242.2415065131 5.8864934869
BXD73 m 168.734 66.7851686276 300.8604689874 36.6075310126
BXD75 m 238.448 59.7344707761 356.6255065131 120.2704934869
BXD77 m 103.132 59.7344707761 221.3095065131 -15.0455065131
BXD79 m 481.7 59.7344707761 599.8775065131 363.5224934869
BXD8 m 287.82 59.7344707761 405.9975065131 169.6424934869
BXD81 m 116.04 77.1168701701 268.6065048739 -36.5265048739
BXD84 m 134.59 59.7344707761 252.7675065131 16.4124934869
BXD87 m 230.4 59.7344707761 348.5775065131 112.2224934869
BXD89 m 71.2772 59.7344707761 189.4547065131 -46.9003065131
BXD90 m 52.31 59.7344707761 170.4875065131 -65.8675065131
C57BL/6J m 248.96 59.7344707761 367.1375065131 130.7824934869
DBA/2J m 128.5435 66.7851686276 260.6699689874 -3.5829689874




  GWAS USING LINEAR MIXED MODELS

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