Project measure / variable:   Schoonjans1   TaMCA_plasma_t30_CD

ID, description, units MPD:112700   TaMCA_plasma_t30_CD   plasma bile acid tauro-α-muricholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min   [ng/mL]  CD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
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  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid tauro-α-muricholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min CD

BXD45BXD12BXD62BXD40BXD51C57BL/6JBXD100BXD79BXD8BXD49BXD75BXD6BXD39BXD32BXD55BXD73BXD64BXD11BXD34BXD53BXD63BXD77BXD69BXD27BXD87BXD84BXD48DBA/2JBXD66BXD43BXD81BXD89BXD48aBXD90BXD67BXD1 ng/mL 020406080100120140160180200femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means43.03   ng/mL
Median of the strain means33.978   ng/mL
SD of the strain means± 24.719
Coefficient of variation (CV)0.5745
Min–max range of strain means10.468   –   106.3   ng/mL
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 91666.8234 2619.0521 3.2684 < 0.0001
Residuals 130 104173.4296 801.3341


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 10.468 2.2473   5 1.005 0.2147 7.2938, 13.044 -1.32
BXD100 m 65.04 28.984   5 12.962 0.4456 43.248, 114.9 0.89
BXD11 m 34.243 33.203   4 16.602 0.9696 8.798, 79.48 -0.36
BXD12 m 104.0 26.527   3 15.315 0.255 73.44, 120.4 2.47
BXD27 m 29.288 10.049   4 5.0246 0.3431 17.84, 38.53 -0.56
BXD32 m 43.475 23.402   5 10.466 0.5383 18.89, 80.73 0.02
BXD34 m 33.712 22.137   5 9.9002 0.6567 12.182, 63.22 -0.38
BXD39 m 51.65 34.786   3 20.084 0.6735 23.392, 90.5 0.35
BXD40 m 76.69 18.865   4 9.4325 0.246 51.07, 95.51 1.36
BXD43 m 20.752 17.308   7 6.5418 0.834 2.922, 53.71 -0.9
BXD45 m 106.3 62.88   4 31.439 0.5917 65.89, 198.8 2.56
BXD48 m 25.912 18.846   5 8.428 0.7273 13.224, 59.24 -0.69
BXD48a m 16.633 13.622   4 6.811 0.819 5.2, 35.442 -1.07
BXD49 m 56.86 18.941   5 8.4706 0.3331 28.66, 78.31 0.56
BXD51 m 73.22 41.295   5 18.468 0.564 14.126, 114.7 1.22
BXD53 m 33.663 22.138   4 11.069 0.6576 17.25, 66.33 -0.38
BXD55 m 39.084 16.96   5 7.5846 0.4339 21.698, 57.02 -0.16
BXD6 m 53.89 48.021   5 21.475 0.8912 15.496, 134.5 0.44
BXD62 m 84.84 39.707   5 17.758 0.468 45.456, 128.1 1.69
BXD63 m 33.416 29.191   4 14.596 0.8736 9.77, 72.99 -0.39
BXD64 m 35.232 31.665   5 14.161 0.8988 10.72, 85.72 -0.32
BXD66 m 22.594 9.1747   5 4.103 0.4061 11.834, 34.204 -0.83
BXD67 m 12.491 4.6965   4 2.3483 0.376 8.152, 19.148 -1.24
BXD69 m 31.062 17.26   5 7.7189 0.5557 15.714, 50.36 -0.48
BXD73 m 38.242 30.982   4 15.491 0.8102 0.036, 66.84 -0.19
BXD75 m 56.09 43.689   5 19.538 0.7789 18.544, 124.9 0.53
BXD77 m 33.155 9.1841   5 4.1072 0.277 18.264, 39.51 -0.4
BXD79 m 63.94 57.8   5 25.85 0.904 12.28, 159.2 0.85
BXD8 m 61.36 26.371   5 11.793 0.4298 20.948, 89.1 0.74
BXD81 m 20.556 9.911   3 5.7221 0.4821 11.296, 31.01 -0.91
BXD84 m 27.306 17.013   5 7.6082 0.623 15.442, 57.37 -0.64
BXD87 m 27.4 22.946   5 10.262 0.8374 12.898, 67.28 -0.63
BXD89 m 19.871 14.05   5 6.2834 0.7071 8.828, 42.732 -0.94
BXD90 m 14.741 8.6973   5 3.8896 0.59 6.954, 27.692 -1.14
C57BL/6J m 67.64 37.183   5 16.629 0.5497 28.05, 128.8 1.0
DBA/2J m 24.256 16.841   4 8.4206 0.6943 5.806, 45.112 -0.76


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 10.46836 12.65965303 35.5139694943 -14.5772494943
BXD100 m 65.0424 12.65965303 90.0880094943 39.9967905057
BXD11 m 34.243 14.1539223733 62.2448426836 6.2411573164
BXD12 m 104.0466666667 16.3435417847 136.3804094891 71.7129238443
BXD27 m 29.288 14.1539223733 57.2898426836 1.2861573164
BXD32 m 43.4748 12.65965303 68.5204094943 18.4291905057
BXD34 m 33.7116 12.65965303 58.7572094943 8.6659905057
BXD39 m 51.6473333333 16.3435417847 83.9810761557 19.3135905109
BXD40 m 76.6875 14.1539223733 104.6893426836 48.6856573164
BXD43 m 20.7522857143 10.6993596217 41.9196891407 -0.4151177121
BXD45 m 106.275 14.1539223733 134.2768426836 78.2731573164
BXD48 m 25.9116 12.65965303 50.9572094943 0.8659905057
BXD48a m 16.6325 14.1539223733 44.6343426836 -11.3693426836
BXD49 m 56.856 12.65965303 81.9016094943 31.8103905057
BXD51 m 73.2228 12.65965303 98.2684094943 48.1771905057
BXD53 m 33.6635 14.1539223733 61.6653426836 5.6616573164
BXD55 m 39.084 12.65965303 64.1296094943 14.0383905057
BXD6 m 53.8852 12.65965303 78.9308094943 28.8395905057
BXD62 m 84.8404 12.65965303 109.8860094943 59.7947905057
BXD63 m 33.4165 14.1539223733 61.4183426836 5.4146573164
BXD64 m 35.2316 12.65965303 60.2772094943 10.1859905057
BXD66 m 22.5944 12.65965303 47.6400094943 -2.4512094943
BXD67 m 12.491 14.1539223733 40.4928426836 -15.5108426836
BXD69 m 31.0616 12.65965303 56.1072094943 6.0159905057
BXD73 m 38.2425 14.1539223733 66.2443426836 10.2406573164
BXD75 m 56.0888 12.65965303 81.1344094943 31.0431905057
BXD77 m 33.1552 12.65965303 58.2008094943 8.1095905057
BXD79 m 63.9384 12.65965303 88.9840094943 38.8927905057
BXD8 m 61.3596 12.65965303 86.4052094943 36.3139905057
BXD81 m 20.5563333333 16.3435417847 52.8900761557 -11.7774094891
BXD84 m 27.3064 12.65965303 52.3520094943 2.2607905057
BXD87 m 27.4004 12.65965303 52.4460094943 2.3547905057
BXD89 m 19.8712 12.65965303 44.9168094943 -5.1744094943
BXD90 m 14.7408 12.65965303 39.7864094943 -10.3048094943
C57BL/6J m 67.638 12.65965303 92.6836094943 42.5923905057
DBA/2J m 24.256 14.1539223733 52.2578426836 -3.7458426836




  GWAS USING LINEAR MIXED MODELS

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