Project measure / variable:   Schoonjans1   aMCA_plasma_t30_HFD

ID, description, units MPD:112687   aMCA_plasma_t30_HFD   plasma bile acid α-muricholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min   [ng/mL]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Schoonjans1 - plasma bile acid α-muricholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min HFD

BXD62BXD12BXD84BXD27BXD40BXD6BXD73BXD55BXD77BXD66BXD81BXD48aBXD49BXD45BXD75BXD1BXD11BXD67BXD39BXD34BXD69BXD48BXD64BXD32BXD89BXD53BXD79BXD90BXD87BXD63BXD100BXD8BXD51C57BL/6JDBA/2JBXD43 ng/mL 0102030405060708090100femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means7.2644   ng/mL
Median of the strain means5.4288   ng/mL
SD of the strain means± 6.132
Coefficient of variation (CV)0.8441
Min–max range of strain means1.629   –   27.439   ng/mL
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 5036.6926 148.138 1.0072 0.4708
Residuals 105 15442.8173 147.0745


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 6.3126 5.8273   4 2.9137 0.9231 2.154, 14.941 -0.16
BXD100 m 2.7376 1.5367   5 0.68725 0.5613 1.068, 4.13 -0.74
BXD11 m 6.07 3.2289   3 1.8642 0.532 3.08, 9.494 -0.19
BXD12 m 27.284 48.891   4 24.446 1.7919 1.37, 100.6 3.26
BXD27 m 15.572 18.139   4 9.0697 1.1649 2.466, 42.25 1.35
BXD32 m 4.0045 2.9711   4 1.4855 0.7419 1.326, 7.71 -0.53
BXD34 m 4.7625 2.386   4 1.193 0.501 1.872, 7.572 -0.41
BXD39 m 5.269 3.7689   2   2.665 0.7153 2.604, 7.934 -0.33
BXD40 m 11.043 7.4114   4 3.7057 0.6711 4.064, 18.184 0.62
BXD43 m 1.629 0.28991   2   0.205 0.178 1.424, 1.834 -0.92
BXD45 m 7.0028 2.2538   5 1.0079 0.3218 4.264, 9.134 -0.04
BXD48 m 4.4772 2.7057   5 1.21 0.6043 2.11, 8.416 -0.45
BXD48a m 7.297 3.4812   4 1.7406 0.4771 4.418, 11.812 0.01
BXD49 m 7.0035 5.9033   4 2.9516 0.8429 2.25, 14.794 -0.04
BXD51 m 2.1776 1.8314   3 1.0573 0.841 1.054, 4.2909 -0.83
BXD53 m 3.9016 1.5259   5 0.6824 0.3911 1.276, 5.136 -0.55
BXD55 m 9.0244 8.9349   5 3.9958 0.9901 2.266, 24.104 0.29
BXD6 m 10.809 15.063   5 6.7362 1.3936 1.212, 37.438 0.58
BXD62 m 27.439 30.707   4 15.353 1.1191 3.924, 70.47 3.29
BXD63 m 3.3536 1.6057   5 0.71808 0.4788 1.594, 5.824 -0.64
BXD64 m 4.4004 2.914   5 1.3032 0.6622 1.996, 9.476 -0.47
BXD66 m 7.826 8.1056   3 4.6797 1.0357 2.584, 17.162 0.09
BXD67 m 5.5886 4.4794   5 2.0032 0.8015 1.68, 10.772 -0.27
BXD69 m 4.682 3.5466   4 1.7733 0.7575 1.08, 8.5 -0.42
BXD73 m 10.162 11.072   3 6.3924 1.0896 3.64, 22.946 0.47
BXD75 m 6.4295 7.9014   4 3.9507 1.2289 1.724, 18.246 -0.14
BXD77 m 8.3744 2.9522   5 1.3203 0.3525 5.43, 13.162 0.18
BXD79 m 3.8736 2.5883   5 1.1575 0.6682 1.038, 6.956 -0.55
BXD8 m 2.644 1.3859   2   0.98 0.5242 1.664, 3.624 -0.75
BXD81 m 7.3024 3.6564   5 1.6352 0.5007 4.288, 13.484 0.01
BXD84 m 18.108 24.412   4 12.206 1.3481 1.64, 54.09 1.77
BXD87 m 3.471 1.7748   2   1.255 0.5113 2.216, 4.726 -0.62
BXD89 m 3.9464 2.3803   5 1.0645 0.6032 1.756, 7.17 -0.54
BXD90 m 3.5414 1.811   4 0.90549 0.5114 1.8235, 5.818 -0.61
C57BL/6J m 2.0847 0.73722   3 0.42563 0.3536 1.358, 2.832 -0.84
DBA/2J m 1.914 0.0   1   0.0 0.0 1.914, 1.914 -0.87


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 6.312575 6.0637127793 18.3357973146 -5.7106473146
BXD100 m 2.7376 5.4235495882 13.4914969617 -8.0162969617
BXD11 m 6.07 7.0017724108 19.9532212798 -7.8132212798
BXD12 m 27.284 6.0637127793 39.3072223146 15.2607776854
BXD27 m 15.5715 6.0637127793 27.5947223146 3.5482776854
BXD32 m 4.0045 6.0637127793 16.0277223146 -8.0187223146
BXD34 m 4.7625 6.0637127793 16.7857223146 -7.2607223146
BXD39 m 5.269 8.5753848508 22.2724040608 -11.7344040608
BXD40 m 11.043 6.0637127793 23.0662223146 -0.9802223146
BXD43 m 1.629 8.5753848508 18.6324040608 -15.3744040608
BXD45 m 7.0028 5.4235495882 17.7566969617 -3.7510969617
BXD48 m 4.4772 5.4235495882 15.2310969617 -6.2766969617
BXD48a m 7.297 6.0637127793 19.3202223146 -4.7262223146
BXD49 m 7.0035 6.0637127793 19.0267223146 -5.0197223146
BXD51 m 2.1776333333 7.0017724108 16.0608546131 -11.7055879464
BXD53 m 3.9016 5.4235495882 14.6554969617 -6.8522969617
BXD55 m 9.0244 5.4235495882 19.7782969617 -1.7294969617
BXD6 m 10.80866 5.4235495882 21.5625569617 0.0547630383
BXD62 m 27.439 6.0637127793 39.4622223146 15.4157776854
BXD63 m 3.3536 5.4235495882 14.1074969617 -7.4002969617
BXD64 m 4.4004 5.4235495882 15.1542969617 -6.3534969617
BXD66 m 7.826 7.0017724108 21.7092212798 -6.0572212798
BXD67 m 5.5886 5.4235495882 16.3424969617 -5.1652969617
BXD69 m 4.682 6.0637127793 16.7052223146 -7.3412223146
BXD73 m 10.162 7.0017724108 24.0452212798 -3.7212212798
BXD75 m 6.4295 6.0637127793 18.4527223146 -5.5937223146
BXD77 m 8.3744 5.4235495882 19.1282969617 -2.3794969617
BXD79 m 3.8736 5.4235495882 14.6274969617 -6.8802969617
BXD8 m 2.644 8.5753848508 19.6474040608 -14.3594040608
BXD81 m 7.3024 5.4235495882 18.0562969617 -3.4514969617
BXD84 m 18.10775 6.0637127793 30.1309723146 6.0845276854
BXD87 m 3.471 8.5753848508 20.4744040608 -13.5324040608
BXD89 m 3.9464 5.4235495882 14.7002969617 -6.8074969617
BXD90 m 3.541375 6.0637127793 15.5645973146 -8.4818473146
C57BL/6J m 2.0846666667 7.0017724108 15.9678879464 -11.7985546131




  GWAS USING LINEAR MIXED MODELS

Loading data... this may take some time.