Project measure / variable:   Schoonjans1   keto_DCA_plasma_t30_HFD

ID, description, units MPD:112685   keto_DCA_plasma_t30_HFD   plasma bile acid 7-ketodeoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min   [ng/mL]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   34 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Schoonjans1 - plasma bile acid 7-ketodeoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 30 min HFD

BXD49BXD6BXD48BXD62BXD55BXD75BXD1BXD69BXD48aBXD40BXD89BXD27BXD12BXD73BXD11BXD32BXD81BXD66BXD84BXD45BXD8BXD87BXD90BXD64BXD67BXD39BXD53BXD77BXD79BXD34BXD63C57BL/6JBXD100DBA/2J ng/mL 0246810121416182022femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested34 strains
Mean of the strain means1.3131   ng/mL
Median of the strain means0.781   ng/mL
SD of the strain means± 1.3481
Coefficient of variation (CV)1.0266
Min–max range of strain means0.218   –   7.1272   ng/mL
Mean sample size per strain3.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 31 254.4489 8.208 0.9468 0.5547
Residuals 75 650.2202 8.6696


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 34 (34)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 1.659 1.7376   5 0.77706 1.0473 0.242, 4.5938 0.26
BXD100 m 0.401 0.25314   2   0.179 0.6313 0.222, 0.58 -0.68
BXD11 m 0.921 0.42285   2   0.299 0.4591 0.622, 1.22 -0.29
BXD12 m 1.1247 1.1563   3 0.66759 1.0281 0.222, 2.428 -0.14
BXD27 m 1.1527 1.1426   3 0.65967 0.9912 0.49, 2.472 -0.12
BXD32 m 0.905 0.30688   2   0.217 0.3391 0.688, 1.122 -0.3
BXD34 m 0.468 0.27393   3 0.15815 0.5853 0.208, 0.754 -0.63
BXD39 m 0.609 0.25597   2   0.181 0.4203 0.428, 0.79 -0.52
BXD40 m 1.553 1.5782   4 0.78911 1.0162 0.382, 3.842 0.18
BXD45 m 0.7048 0.34729   5 0.15531 0.4928 0.352, 1.194 -0.45
BXD48 m 3.033 2.4508   2   1.733 0.8081 1.3, 4.766 1.28
BXD48a m 1.6035 1.0583   4 0.52916 0.66 0.666, 2.736 0.22
BXD49 m 7.1272 9.643   5 4.3125 1.353 0.758, 22.73 4.31
BXD53 m 0.4935 0.37451   4 0.18726 0.7589 0.22, 1.046 -0.61
BXD55 m 2.1608 2.8045   5 1.2542 1.2979 0.376, 7.086 0.63
BXD6 m 4.1538 6.4708   5 2.8938 1.5578 0.25, 15.517 2.11
BXD62 m 2.9567 3.1766   3 1.834 1.0744 0.728, 6.594 1.22
BXD63 m 0.4315 0.31389   4 0.15695 0.7274 0.2, 0.88 -0.65
BXD64 m 0.641 0.15132   2   0.107 0.2361 0.534, 0.748 -0.5
BXD66 m 0.718 0.4978   2   0.352 0.6933 0.366, 1.07 -0.44
BXD67 m 0.61333 0.35487   3 0.20488 0.5786 0.326, 1.01 -0.52
BXD69 m 1.6107 0.8961   3 0.51737 0.5564 0.576, 2.138 0.22
BXD73 m 1.0073 1.0717   3 0.61873 1.0639 0.318, 2.242 -0.23
BXD75 m 2.0713 1.9041   3 1.0993 0.9193 0.97, 4.27 0.56
BXD77 m 0.49 0.39733   5 0.17769 0.8109 0.262, 1.188 -0.61
BXD79 m 0.48933 0.19399   3 0.112 0.3964 0.266, 0.616 -0.61
BXD8 m 0.693 0.02404   2   0.017 0.0347 0.676, 0.71 -0.46
BXD81 m 0.844 0.51617   3 0.29801 0.6116 0.418, 1.418 -0.35
BXD84 m 0.7149 0.44988   5 0.20119 0.6293 0.246, 1.358 -0.44
BXD87 m 0.682 0.56378   3 0.3255 0.8267 0.304, 1.33 -0.47
BXD89 m 1.3235 1.7138   4 0.85688 1.2949 0.266, 3.874 0.01
BXD90 m 0.668 0.0   1   0.0 0.0 0.668, 0.668 -0.48
C57BL/6J m 0.40267 0.09644   3 0.05568 0.2395 0.312, 0.504 -0.68
DBA/2J m 0.218 0.0   1   0.0 0.0 0.218, 0.218 -0.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 1.659026 1.3167841864 4.282194614 -0.964142614
BXD100 m 0.401 2.0820186079 4.5485937535 -3.7465937535
BXD11 m 0.921 2.0820186079 5.0685937535 -3.2265937535
BXD12 m 1.1246666667 1.6999610748 4.5111627855 -2.2618294521
BXD27 m 1.1526666667 1.6999610748 4.5391627855 -2.2338294521
BXD32 m 0.905 2.0820186079 5.0525937535 -3.2425937535
BXD34 m 0.468 1.6999610748 3.8544961188 -2.9184961188
BXD39 m 0.609 2.0820186079 4.7565937535 -3.5385937535
BXD40 m 1.553 1.4722094762 4.4857916687 -1.3797916687
BXD45 m 0.7048 1.3167841864 3.327968614 -1.918368614
BXD48 m 3.033 2.0820186079 7.1805937535 -1.1145937535
BXD48a m 1.6035 1.4722094762 4.5362916687 -1.3292916687
BXD49 m 7.1272 1.3167841864 9.750368614 4.504031386
BXD53 m 0.4935 1.4722094762 3.4262916687 -2.4392916687
BXD55 m 2.1608 1.3167841864 4.783968614 -0.462368614
BXD6 m 4.15378 1.3167841864 6.776948614 1.530611386
BXD62 m 2.9566666667 1.6999610748 6.3431627855 -0.4298294521
BXD63 m 0.4315 1.4722094762 3.3642916687 -2.5012916687
BXD64 m 0.641 2.0820186079 4.7885937535 -3.5065937535
BXD66 m 0.718 2.0820186079 4.8655937535 -3.4295937535
BXD67 m 0.6133333333 1.6999610748 3.9998294521 -2.7731627855
BXD69 m 1.6106666667 1.6999610748 4.9971627855 -1.7758294521
BXD73 m 1.0073333333 1.6999610748 4.3938294521 -2.3791627855
BXD75 m 2.0713333333 1.6999610748 5.4578294521 -1.3151627855
BXD77 m 0.49 1.3167841864 3.113168614 -2.133168614
BXD79 m 0.4893333333 1.6999610748 3.8758294521 -2.8971627855
BXD8 m 0.693 2.0820186079 4.8405937535 -3.4545937535
BXD81 m 0.844 1.6999610748 4.2304961188 -2.5424961188
BXD84 m 0.7149 1.3167841864 3.338068614 -1.908268614
BXD87 m 0.682 1.6999610748 4.0684961188 -2.7044961188
BXD89 m 1.3235 1.4722094762 4.2562916687 -1.6092916687
C57BL/6J m 0.4026666667 1.6999610748 3.7891627855 -2.9838294521




  GWAS USING LINEAR MIXED MODELS

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