Project measure / variable:   Schoonjans1   gluc_kinetic_t60_CD

ID, description, units MPD:112644   gluc_kinetic_t60_CD   glucose, glucose kinetic test (Ensure Plus oral gavage, overday fast), at 20 wks of age, after 60 min   [mmol/L]  CD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure glucose tolerance
Ontology mappings

  STRAIN COMPARISON PLOT
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Schoonjans1 - glucose, glucose kinetic test (Ensure Plus oral gavage, overday fast), at 20 wks of age, after 60 min CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means188.3   mmol/L
Median of the strain means179.7   mmol/L
SD of the strain means± 62.21
Coefficient of variation (CV)0.3304
Min–max range of strain means115.2   –   511.8   mmol/L
Mean sample size per strain4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 671715.7779 19191.8794 9.544 < 0.0001
Residuals 136 273478.85 2010.8739


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 136.0 13.874   5 6.2048 0.102 112.0, 146.0 -0.84
BXD100 m 191.0 21.436   5 9.5864 0.1122 163.0, 223.0 0.04
BXD11 m 196.5 30.05   4 15.025 0.1529 171.0, 240.0 0.13
BXD12 m 173.5 9.4692   4 4.7346 0.0546 161.0, 183.0 -0.24
BXD27 m 231.0 155.7   4 77.84 0.6739 129.0, 463.0 0.69
BXD32 m 163.6 27.88   5 12.468 0.1704 131.0, 208.0 -0.4
BXD34 m 179.6 10.784   5 4.8229 0.06 171.0, 198.0 -0.14
BXD39 m 226.8 130.2   5 58.22 0.574 79.0, 421.0 0.62
BXD40 m 175.6 12.137   5 5.4277 0.0691 166.0, 196.0 -0.2
BXD43 m 245.8 52.9   5 23.657 0.2152 192.0, 325.0 0.92
BXD45 m 183.2 24.102   4 12.051 0.1315 160.0, 216.0 -0.08
BXD48 m 197.4 18.69   5 8.3582 0.0947 179.0, 225.0 0.15
BXD48a m 150.5 17.137   4 8.5684 0.1139 134.0, 171.0 -0.61
BXD49 m 179.8 14.653   5 6.5529 0.0815 157.0, 197.0 -0.14
BXD51 m 176.8 35.216   5 15.749 0.1992 121.0, 213.0 -0.18
BXD53 m 137.8 13.846   5 6.1919 0.1005 119.0, 149.0 -0.81
BXD55 m 151.8 15.123   5 6.7631 0.0996 134.0, 167.0 -0.59
BXD6 m 186.2 26.715   5 11.947 0.1435 157.0, 218.0 -0.03
BXD62 m 148.6 21.536   5 9.6312 0.1449 138.0, 187.0 -0.64
BXD63 m 164.0 10.512   5 4.7011 0.0641 148.0, 174.0 -0.39
BXD64 m 211.4 30.013   5 13.422 0.142 173.0, 257.0 0.37
BXD66 m 115.2 11.841   5 5.2953 0.1028 103.0, 131.0 -1.17
BXD67 m 170.0 15.706   4 7.8528 0.0924 149.0, 187.0 -0.29
BXD69 m 511.8 40.084   5 17.926 0.0783 476.0, 576.0 5.2
BXD73 m 175.0 14.883   5 6.6558 0.085 153.0, 194.0 -0.21
BXD75 m 191.2 19.149   5 8.5639 0.1002 157.0, 201.0 0.05
BXD77 m 193.4 18.703   5 8.3642 0.0967 178.0, 224.0 0.08
BXD79 m 199.8 33.73   5 15.084 0.1688 169.0, 253.0 0.19
BXD8 m 167.8 34.896   5 15.606 0.208 145.0, 229.0 -0.33
BXD81 m 157.2 20.073   4 10.036 0.1276 142.0, 185.0 -0.5
BXD84 m 188.4 80.65   5 36.069 0.4281 95.0, 313.0 0.0
BXD87 m 131.4 16.38   5 7.3253 0.1247 118.0, 155.0 -0.91
BXD89 m 193.0 41.376   5 18.504 0.2144 168.0, 266.0 0.08
BXD90 m 164.0 24.92   5 11.145 0.152 140.0, 203.0 -0.39
C57BL/6J m 200.6 36.115   5 16.151 0.18 153.0, 248.0 0.2
DBA/2J m 211.8 96.61   4 48.304 0.4562 110.0, 337.0 0.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 136.0 20.0542957845 175.6585887449 96.3414112551
BXD100 m 191.0 20.0542957845 230.6585887449 151.3414112551
BXD11 m 196.5 22.4213843075 240.8396501627 152.1603498373
BXD12 m 173.5 22.4213843075 217.8396501627 129.1603498373
BXD27 m 231.0 22.4213843075 275.3396501627 186.6603498373
BXD32 m 163.6 20.0542957845 203.2585887449 123.9414112551
BXD34 m 179.6 20.0542957845 219.2585887449 139.9414112551
BXD39 m 226.8 20.0542957845 266.4585887449 187.1414112551
BXD40 m 175.6 20.0542957845 215.2585887449 135.9414112551
BXD43 m 245.8 20.0542957845 285.4585887449 206.1414112551
BXD45 m 183.25 22.4213843075 227.5896501627 138.9103498373
BXD48 m 197.4 20.0542957845 237.0585887449 157.7414112551
BXD48a m 150.5 22.4213843075 194.8396501627 106.1603498373
BXD49 m 179.8 20.0542957845 219.4585887449 140.1414112551
BXD51 m 176.8 20.0542957845 216.4585887449 137.1414112551
BXD53 m 137.8 20.0542957845 177.4585887449 98.1414112551
BXD55 m 151.8 20.0542957845 191.4585887449 112.1414112551
BXD6 m 186.2 20.0542957845 225.8585887449 146.5414112551
BXD62 m 148.6 20.0542957845 188.2585887449 108.9414112551
BXD63 m 164.0 20.0542957845 203.6585887449 124.3414112551
BXD64 m 211.4 20.0542957845 251.0585887449 171.7414112551
BXD66 m 115.2 20.0542957845 154.8585887449 75.5414112551
BXD67 m 170.0 22.4213843075 214.3396501627 125.6603498373
BXD69 m 511.8 20.0542957845 551.4585887449 472.1414112551
BXD73 m 175.0 20.0542957845 214.6585887449 135.3414112551
BXD75 m 191.2 20.0542957845 230.8585887449 151.5414112551
BXD77 m 193.4 20.0542957845 233.0585887449 153.7414112551
BXD79 m 199.8 20.0542957845 239.4585887449 160.1414112551
BXD8 m 167.8 20.0542957845 207.4585887449 128.1414112551
BXD81 m 157.25 22.4213843075 201.5896501627 112.9103498373
BXD84 m 188.4 20.0542957845 228.0585887449 148.7414112551
BXD87 m 131.4 20.0542957845 171.0585887449 91.7414112551
BXD89 m 193.0 20.0542957845 232.6585887449 153.3414112551
BXD90 m 164.0 20.0542957845 203.6585887449 124.3414112551
C57BL/6J m 200.6 20.0542957845 240.2585887449 160.9414112551
DBA/2J m 211.75 22.4213843075 256.0896501627 167.4103498373




  GWAS USING LINEAR MIXED MODELS