Project measure / variable:   Schoonjans1   gluc_kinetic_t30_HFD

ID, description, units MPD:112643   gluc_kinetic_t30_HFD   glucose, glucose kinetic test (Ensure Plus oral gavage, overday fast), at 20 wks of age, after 30 min   [mmol/L]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure glucose tolerance
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  STRAIN COMPARISON PLOT
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Schoonjans1 - glucose, glucose kinetic test (Ensure Plus oral gavage, overday fast), at 20 wks of age, after 30 min HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means289.3   mmol/L
Median of the strain means278.4   mmol/L
SD of the strain means± 76.31
Coefficient of variation (CV)0.2637
Min–max range of strain means167.5   –   467.4   mmol/L
Mean sample size per strain4.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 965398.4775 27582.8136 6.2408 < 0.0001
Residuals 134 592250.5167 4419.78


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 234.6 117.0   5 52.34 0.4989 151.0, 441.0 -0.72
BXD100 m 222.0 12.193   4 6.0964 0.0549 205.0, 234.0 -0.88
BXD11 m 322.3 142.5   3 82.28 0.4421 208.0, 482.0 0.43
BXD12 m 190.8 33.35   4 16.675 0.1748 155.0, 223.0 -1.29
BXD27 m 467.4 125.9   5 56.32 0.2694 248.0, 568.0 2.33
BXD32 m 203.2 61.87   4 30.934 0.3044 130.0, 280.0 -1.13
BXD34 m 270.4 48.397   5 21.644 0.179 216.0, 337.0 -0.25
BXD39 m 284.4 136.3   5 60.96 0.4793 170.0, 485.0 -0.06
BXD40 m 261.0 52.54   4 26.271 0.2013 218.0, 337.0 -0.37
BXD43 m 314.2 58.95   5 26.362 0.1876 227.0, 389.0 0.33
BXD45 m 279.0 32.886   5 14.707 0.1179 239.0, 324.0 -0.14
BXD48 m 374.6 81.99   5 36.668 0.2189 263.0, 492.0 1.12
BXD48a m 363.2 81.0   5 36.226 0.223 258.0, 431.0 0.97
BXD49 m 224.4 10.526   5 4.7074 0.0469 210.0, 236.0 -0.85
BXD51 m 277.8 59.71   5 26.703 0.2149 212.0, 374.0 -0.15
BXD53 m 413.4 27.646   5 12.364 0.0669 375.0, 452.0 1.63
BXD55 m 208.6 15.71   5 7.0257 0.0753 197.0, 236.0 -1.06
BXD6 m 223.8 32.889   5 14.709 0.147 194.0, 273.0 -0.86
BXD62 m 353.0 45.117   5 20.177 0.1278 317.0, 426.0 0.83
BXD63 m 271.8 33.033   5 14.773 0.1215 236.0, 324.0 -0.23
BXD64 m 351.0 98.6   5 44.094 0.2809 245.0, 510.0 0.81
BXD66 m 191.5 18.267   4 9.1333 0.0954 172.0, 216.0 -1.28
BXD67 m 370.2 46.687   5 20.879 0.1261 293.0, 415.0 1.06
BXD69 m 420.2 102.4   5 45.781 0.2436 280.0, 510.0 1.72
BXD73 m 245.6 46.736   5 20.901 0.1903 200.0, 317.0 -0.57
BXD75 m 265.6 49.833   5 22.286 0.1876 190.0, 316.0 -0.31
BXD77 m 316.8 63.62   4 31.808 0.2008 259.0, 399.0 0.36
BXD79 m 370.6 43.23   5 19.333 0.1166 326.0, 432.0 1.07
BXD8 m 201.4 41.04   5 18.354 0.2038 155.0, 263.0 -1.15
BXD81 m 365.0 73.37   5 32.812 0.201 300.0, 484.0 0.99
BXD84 m 387.8 64.66   5 28.916 0.1667 328.0, 491.0 1.29
BXD87 m 239.0 19.27   4 9.635 0.0806 223.0, 267.0 -0.66
BXD89 m 192.8 11.862   5 5.3047 0.0615 179.0, 208.0 -1.26
BXD90 m 167.5 15.588   4 7.7942 0.0931 152.0, 185.0 -1.6
C57BL/6J m 281.4 71.93   5 32.166 0.2556 214.0, 401.0 -0.1
DBA/2J m 289.2 74.69   5 33.401 0.2583 217.0, 391.0 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 234.6 29.7313974617 293.4035237237 175.7964762763
BXD100 m 222.0 33.2407128952 287.7443381813 156.2556618187
BXD11 m 322.3333333333 38.3830690762 398.2483560267 246.41831064
BXD12 m 190.75 33.2407128952 256.4943381813 125.0056618187
BXD27 m 467.4 29.7313974617 526.2035237236 408.5964762763
BXD32 m 203.25 33.2407128952 268.9943381813 137.5056618187
BXD34 m 270.4 29.7313974617 329.2035237237 211.5964762763
BXD39 m 284.4 29.7313974617 343.2035237237 225.5964762763
BXD40 m 261.0 33.2407128952 326.7443381813 195.2556618187
BXD43 m 314.2 29.7313974617 373.0035237237 255.3964762763
BXD45 m 279.0 29.7313974617 337.8035237237 220.1964762763
BXD48 m 374.6 29.7313974617 433.4035237237 315.7964762763
BXD48a m 363.2 29.7313974617 422.0035237237 304.3964762763
BXD49 m 224.4 29.7313974617 283.2035237237 165.5964762763
BXD51 m 277.8 29.7313974617 336.6035237237 218.9964762763
BXD53 m 413.4 29.7313974617 472.2035237237 354.5964762763
BXD55 m 208.6 29.7313974617 267.4035237237 149.7964762763
BXD6 m 223.8 29.7313974617 282.6035237237 164.9964762763
BXD62 m 353.0 29.7313974617 411.8035237237 294.1964762763
BXD63 m 271.8 29.7313974617 330.6035237237 212.9964762763
BXD64 m 351.0 29.7313974617 409.8035237237 292.1964762763
BXD66 m 191.5 33.2407128952 257.2443381813 125.7556618187
BXD67 m 370.2 29.7313974617 429.0035237237 311.3964762763
BXD69 m 420.2 29.7313974617 479.0035237237 361.3964762763
BXD73 m 245.6 29.7313974617 304.4035237237 186.7964762763
BXD75 m 265.6 29.7313974617 324.4035237237 206.7964762763
BXD77 m 316.75 33.2407128952 382.4943381813 251.0056618187
BXD79 m 370.6 29.7313974617 429.4035237237 311.7964762763
BXD8 m 201.4 29.7313974617 260.2035237237 142.5964762763
BXD81 m 365.0 29.7313974617 423.8035237237 306.1964762763
BXD84 m 387.8 29.7313974617 446.6035237237 328.9964762763
BXD87 m 239.0 33.2407128952 304.7443381813 173.2556618187
BXD89 m 192.8 29.7313974617 251.6035237237 133.9964762763
BXD90 m 167.5 33.2407128952 233.2443381813 101.7556618187
C57BL/6J m 281.4 29.7313974617 340.2035237237 222.5964762763
DBA/2J m 289.2 29.7313974617 348.0035237237 230.3964762763




  GWAS USING LINEAR MIXED MODELS