Project measure / variable:   Schoonjans1   gluc_kinetic_t0_HFD

ID, description, units MPD:112641   gluc_kinetic_t0_HFD   glucose, glucose kinetic test (Ensure Plus oral gavage, overday fast), at 20 wks of age, after 0 min   [mmol/L]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure glucose tolerance
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  STRAIN COMPARISON PLOT
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Schoonjans1 - glucose, glucose kinetic test (Ensure Plus oral gavage, overday fast), at 20 wks of age, after 0 min HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means159.9   mmol/L
Median of the strain means159.6   mmol/L
SD of the strain means± 20.484
Coefficient of variation (CV)0.1281
Min–max range of strain means122.5   –   204.4   mmol/L
Mean sample size per strain4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 70555.0412 2015.8583 2.0555 0.0018
Residuals 135 132394.1167 980.6972


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 132.8 35.689   5 15.961 0.2687 94.0, 190.0 -1.32
BXD100 m 132.8 2.9861   4 1.493 0.0225 129.0, 136.0 -1.32
BXD11 m 161.3 29.484   3 17.023 0.1828 128.0, 184.0 0.07
BXD12 m 156.5 15.416   4 7.7082 0.0985 141.0, 173.0 -0.17
BXD27 m 170.4 32.639   5 14.597 0.1915 122.0, 203.0 0.51
BXD32 m 144.0 17.645   4 8.8223 0.1225 125.0, 166.0 -0.78
BXD34 m 136.4 12.219   5 5.4644 0.0896 123.0, 156.0 -1.15
BXD39 m 204.4 86.14   5 38.523 0.4214 142.0, 348.0 2.17
BXD40 m 148.0 13.88   4 6.9402 0.0938 135.0, 160.0 -0.58
BXD43 m 157.2 17.196   5 7.6903 0.1094 138.0, 177.0 -0.13
BXD45 m 181.6 9.2628   5 4.1425 0.051 169.0, 191.0 1.06
BXD48 m 167.4 17.869   5 7.9912 0.1067 151.0, 187.0 0.36
BXD48a m 173.6 24.572   5 10.989 0.1415 155.0, 215.0 0.67
BXD49 m 176.0 8.6313   5 3.8601 0.049 167.0, 190.0 0.78
BXD51 m 162.4 34.961   5 15.635 0.2153 125.0, 214.0 0.12
BXD53 m 188.2 27.472   5 12.286 0.146 141.0, 213.0 1.38
BXD55 m 168.0 15.54   5 6.9498 0.0925 154.0, 193.0 0.39
BXD6 m 153.0 12.708   5 5.6833 0.0831 139.0, 170.0 -0.34
BXD62 m 135.4 8.8769   5 3.9699 0.0656 125.0, 149.0 -1.2
BXD63 m 153.0 8.0932   5 3.6194 0.0529 145.0, 162.0 -0.34
BXD64 m 200.2 77.83   5 34.807 0.3888 135.0, 316.0 1.97
BXD66 m 122.5 13.675   4 6.8374 0.1116 104.0, 137.0 -1.83
BXD67 m 177.6 11.803   5 5.2783 0.0665 168.0, 191.0 0.86
BXD69 m 173.8 60.85   5 27.211 0.3501 122.0, 274.0 0.68
BXD73 m 156.0 18.344   5 8.2037 0.1176 140.0, 187.0 -0.19
BXD75 m 155.6 13.921   5 6.2258 0.0895 135.0, 173.0 -0.21
BXD77 m 168.4 24.866   5 11.12 0.1477 152.0, 211.0 0.41
BXD79 m 161.0 20.53   5 9.1815 0.1275 146.0, 189.0 0.05
BXD8 m 125.4 19.705   5 8.8125 0.1571 97.0, 149.0 -1.69
BXD81 m 186.4 28.737   5 12.851 0.1542 161.0, 231.0 1.29
BXD84 m 164.4 60.35   5 26.988 0.3671 121.0, 269.0 0.22
BXD87 m 153.8 9.1788   4 4.5894 0.0597 144.0, 166.0 -0.3
BXD89 m 124.2 15.498   5 6.9311 0.1248 102.0, 142.0 -1.74
BXD90 m 144.8 7.0415   4 3.5208 0.0486 137.0, 154.0 -0.74
C57BL/6J m 182.8 7.328   5 3.2772 0.0401 173.0, 191.0 1.12
DBA/2J m 158.2 37.805   5 16.907 0.239 121.0, 220.0 -0.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 132.8 14.0049788325 160.4975384799 105.1024615201
BXD100 m 132.75 15.6580423465 163.7167894253 101.7832105747
BXD11 m 161.3333333333 18.0803499274 197.0907017546 125.5759649121
BXD12 m 156.5 15.6580423465 187.4667894253 125.5332105747
BXD27 m 170.4 14.0049788325 198.0975384799 142.7024615201
BXD32 m 144.0 15.6580423465 174.9667894253 113.0332105747
BXD34 m 136.4 14.0049788325 164.0975384799 108.7024615201
BXD39 m 204.4 14.0049788325 232.0975384799 176.7024615201
BXD40 m 148.0 15.6580423465 178.9667894253 117.0332105747
BXD43 m 157.2 14.0049788325 184.8975384799 129.5024615201
BXD45 m 181.6 14.0049788325 209.2975384799 153.9024615201
BXD48 m 167.4 14.0049788325 195.0975384799 139.7024615201
BXD48a m 173.6 14.0049788325 201.2975384799 145.9024615201
BXD49 m 176.0 14.0049788325 203.6975384799 148.3024615201
BXD51 m 162.4 14.0049788325 190.0975384799 134.7024615201
BXD53 m 188.2 14.0049788325 215.8975384799 160.5024615201
BXD55 m 168.0 14.0049788325 195.6975384799 140.3024615201
BXD6 m 153.0 14.0049788325 180.6975384799 125.3024615201
BXD62 m 135.4 14.0049788325 163.0975384799 107.7024615201
BXD63 m 153.0 14.0049788325 180.6975384799 125.3024615201
BXD64 m 200.2 14.0049788325 227.8975384799 172.5024615201
BXD66 m 122.5 15.6580423465 153.4667894253 91.5332105747
BXD67 m 177.6 14.0049788325 205.2975384799 149.9024615201
BXD69 m 173.8 14.0049788325 201.4975384799 146.1024615201
BXD73 m 156.0 14.0049788325 183.6975384799 128.3024615201
BXD75 m 155.6 14.0049788325 183.2975384799 127.9024615201
BXD77 m 168.4 14.0049788325 196.0975384799 140.7024615201
BXD79 m 161.0 14.0049788325 188.6975384799 133.3024615201
BXD8 m 125.4 14.0049788325 153.0975384799 97.7024615201
BXD81 m 186.4 14.0049788325 214.0975384799 158.7024615201
BXD84 m 164.4 14.0049788325 192.0975384799 136.7024615201
BXD87 m 153.75 15.6580423465 184.7167894253 122.7832105747
BXD89 m 124.2 14.0049788325 151.8975384799 96.5024615201
BXD90 m 144.75 15.6580423465 175.7167894253 113.7832105747
C57BL/6J m 182.8 14.0049788325 210.4975384799 155.1024615201
DBA/2J m 158.2 14.0049788325 185.8975384799 130.5024615201




  GWAS USING LINEAR MIXED MODELS