Project measure / variable:   Schoonjans1   bw_29wks_HFD

ID, description, units MPD:112639   bw_29wks_HFD   body weight at sacrifice, 29 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 29wks
Procedure body weight
Ontology mappings

  STRAIN COMPARISON PLOT
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Schoonjans1 - body weight at sacrifice, 29 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means47.643   g
Median of the strain means48.575   g
SD of the strain means± 7.5643
Coefficient of variation (CV)0.1588
Min–max range of strain means31.045   –   59.43   g
Mean sample size per strain4.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 8859.2115 253.1203 9.2804 < 0.0001
Residuals 140 3818.4443 27.2746


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 41.396 5.9334   5 2.6535 0.1433 35.15, 50.05 -0.83
BXD100 m 48.903 10.675   7 4.0347 0.2183 36.67, 61.02 0.17
BXD11 m 55.35 4.7202   3 2.7252 0.0853 49.94, 58.61 1.02
BXD12 m 31.045 2.4105   4 1.2052 0.0776 27.44, 32.5 -2.19
BXD27 m 41.94 3.2207   5 1.4403 0.0768 36.78, 44.36 -0.75
BXD32 m 44.328 6.4895   4 3.2448 0.1464 34.72, 48.45 -0.44
BXD34 m 32.703 11.073   3 6.3928 0.3386 20.69, 42.5 -1.98
BXD39 m 46.89 0.46244   5 0.20681 0.0099 46.21, 47.39 -0.1
BXD40 m 48.246 2.8708   5 1.2838 0.0595 44.52, 52.25 0.08
BXD43 m 54.42 7.4897   5 3.3495 0.1376 44.35, 60.18 0.9
BXD45 m 50.03 2.4707   5 1.1049 0.0494 47.13, 53.63 0.32
BXD48 m 52.97 4.1137   5 1.8397 0.0777 46.36, 56.7 0.7
BXD48a m 58.71 5.2251   5 2.3367 0.089 52.62, 63.13 1.46
BXD49 m 49.436 9.7261   5 4.3497 0.1967 35.69, 62.72 0.24
BXD51 m 59.43 4.5289   5 2.0254 0.0762 52.82, 65.0 1.56
BXD53 m 49.232 1.2362   5 0.55283 0.0251 47.69, 50.61 0.21
BXD55 m 46.174 3.7521   5 1.678 0.0813 40.28, 49.37 -0.19
BXD6 m 48.912 6.0942   5 2.7254 0.1246 38.54, 53.71 0.17
BXD62 m 48.22 1.9038   5 0.85139 0.0395 46.22, 50.86 0.08
BXD63 m 59.03 2.4875   5 1.1124 0.0421 56.31, 62.95 1.51
BXD64 m 44.284 3.6343   5 1.6253 0.0821 40.34, 47.45 -0.44
BXD66 m 46.406 8.9424   9 2.9808 0.1927 34.49, 58.97 -0.16
BXD67 m 54.44 2.1615   5 0.96663 0.0397 51.8, 57.47 0.9
BXD69 m 40.37 3.2864   5 1.4697 0.0814 35.73, 43.7 -0.96
BXD73 m 47.68 2.9693   5 1.3279 0.0623 43.62, 51.22 0.0
BXD75 m 51.37 2.2316   4 1.1158 0.0434 48.52, 53.61 0.49
BXD77 m 40.416 3.2442   5 1.4509 0.0803 35.89, 44.85 -0.96
BXD79 m 50.24 3.1626   5 1.4144 0.063 46.65, 53.6 0.34
BXD8 m 33.4 6.1058   4 3.0529 0.1828 29.91, 42.54 -1.88
BXD81 m 47.23 1.2915   5 0.57757 0.0273 45.2, 48.53 -0.05
BXD84 m 59.24 5.6681   5 2.5348 0.0957 52.69, 67.9 1.53
BXD87 m 33.496 4.1621   5 1.8614 0.1243 29.32, 39.73 -1.87
BXD89 m 40.288 3.6674   5 1.6401 0.091 34.76, 45.08 -0.97
BXD90 m 54.36 3.007   3 1.7361 0.0553 52.05, 57.76 0.89
C57BL/6J m 54.92 2.1205   5 0.94832 0.0386 52.07, 57.64 0.96
DBA/2J m 49.632 3.7328   5 1.6694 0.0752 44.51, 53.69 0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 41.396 2.335577094 46.0135613812 36.7784386188
BXD100 m 48.9028571429 1.9739229182 52.8054087907 45.000305495
BXD11 m 55.3533333333 3.0152170629 61.3145794432 49.3920872235
BXD12 m 31.045 2.6112545744 36.2075905694 25.8824094306
BXD27 m 41.94 2.335577094 46.5575613812 37.3224386188
BXD32 m 44.3275 2.6112545744 49.4900905694 39.1649094306
BXD34 m 32.7033333333 3.0152170629 38.6645794432 26.7420872235
BXD39 m 46.89 2.335577094 51.5075613812 42.2724386188
BXD40 m 48.246 2.335577094 52.8635613812 43.6284386188
BXD43 m 54.424 2.335577094 59.0415613812 49.8064386188
BXD45 m 50.026 2.335577094 54.6435613812 45.4084386188
BXD48 m 52.966 2.335577094 57.5835613812 48.3484386188
BXD48a m 58.71 2.335577094 63.3275613812 54.0924386188
BXD49 m 49.436 2.335577094 54.0535613812 44.8184386188
BXD51 m 59.428 2.335577094 64.0455613812 54.8104386188
BXD53 m 49.232 2.335577094 53.8495613812 44.6144386188
BXD55 m 46.174 2.335577094 50.7915613812 41.5564386188
BXD6 m 48.912 2.335577094 53.5295613812 44.2944386188
BXD62 m 48.22 2.335577094 52.8375613812 43.6024386188
BXD63 m 59.034 2.335577094 63.6515613812 54.4164386188
BXD64 m 44.284 2.335577094 48.9015613812 39.6664386188
BXD66 m 46.4055555556 1.740836383 49.8472826018 42.9638285093
BXD67 m 54.44 2.335577094 59.0575613812 49.8224386188
BXD69 m 40.37 2.335577094 44.9875613812 35.7524386188
BXD73 m 47.68 2.335577094 52.2975613812 43.0624386188
BXD75 m 51.375 2.6112545744 56.5375905694 46.2124094306
BXD77 m 40.416 2.335577094 45.0335613812 35.7984386188
BXD79 m 50.236 2.335577094 54.8535613812 45.6184386188
BXD8 m 33.4 2.6112545744 38.5625905694 28.2374094306
BXD81 m 47.23 2.335577094 51.8475613812 42.6124386188
BXD84 m 59.236 2.335577094 63.8535613812 54.6184386188
BXD87 m 33.496 2.335577094 38.1135613812 28.8784386188
BXD89 m 40.288 2.335577094 44.9055613812 35.6704386188
BXD90 m 54.36 3.0152170629 60.3212461099 48.3987538901
C57BL/6J m 54.924 2.335577094 59.5415613812 50.3064386188
DBA/2J m 49.632 2.335577094 54.2495613812 45.0144386188




  GWAS USING LINEAR MIXED MODELS