Project measure / variable:   Zimmermann1   fine_act_dark

ID, description, units MPD:112173   fine_act_dark   fine or stationary movement on x-y axis, repeated interruptions of same beam, second day (beam breaks/min)   [n/min]  during dark  
Data set, strains Zimmermann1   inbred   30 strains     sex: both     age: 7-15wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Zimmermann1 - fine or stationary movement on x-y axis, repeated interruptions of same beam, second day (beam breaks/min) during dark



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means27.435   n/min 25.502   n/min
Median of the strain means26.755   n/min 25.773   n/min
SD of the strain means± 6.749 ± 5.2173
Coefficient of variation (CV)0.246 0.2046
Min–max range of strain means17.699   –   51.77   n/min 15.385   –   36.883   n/min
Mean sample size per strain11.2   mice 11.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 633.3936 633.3936 6.6732 0.01
strain 29 19273.0993 664.5896 7.0019 < 0.0001
sex:strain 29 4856.7776 167.4751 1.7645 0.0086
Residuals 611 57993.7381 94.9161


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 20.096 2.6824   12 0.77435 0.1335 16.547, 24.465 -1.09
129S1/SvImJ m 29.132 9.9729   10 3.1537 0.3423 15.206, 50.62 0.7
129X1/SvJ f 21.951 2.223   6 0.90755 0.1013 19.572, 25.24 -0.81
129X1/SvJ m 22.758 4.2243   8 1.4935 0.1856 17.499, 28.919 -0.53
A/J f 23.006 3.605   12 1.0407 0.1567 17.568, 27.671 -0.66
A/J m 25.762 3.4968   12 1.0094 0.1357 21.014, 30.608 0.05
AKR/J f 31.518 5.5811   12 1.6111 0.1771 19.325, 42.433 0.6
AKR/J m 28.828 3.8688   11 1.1665 0.1342 24.269, 36.756 0.64
BALB/cJ f 29.376 5.4605   11 1.6464 0.1859 17.318, 35.56 0.29
BALB/cJ m 30.469 4.7683   11 1.4377 0.1565 21.535, 36.454 0.95
BTBR T+ Itpr3tf/J f 23.35 3.7485   12 1.0821 0.1605 16.633, 29.265 -0.61
BTBR T+ Itpr3tf/J m 23.331 3.2188   12 0.92918 0.138 18.983, 30.676 -0.42
BUB/BnJ f 37.796 5.0865   11 1.5336 0.1346 29.806, 47.208 1.54
BUB/BnJ m 36.883 9.8622   11 2.9736 0.2674 27.701, 64.26 2.18
C3H/HeJ f 24.548 5.3777   12 1.5524 0.2191 15.546, 34.629 -0.43
C3H/HeJ m 25.783 5.5116   12 1.5911 0.2138 16.694, 34.104 0.05
C3H/HeOuJ f 32.364 4.5657   12 1.318 0.1411 24.856, 41.729 0.73
C3H/HeOuJ m 31.9 4.8138   12 1.3896 0.1509 26.464, 40.207 1.23
C57BL/6J f 35.603 3.077   12 0.88824 0.0864 31.253, 41.0 1.21
C57BL/6J m 31.05 4.6454   12 1.341 0.1496 23.843, 39.789 1.06
C57BL/6NCrl f 32.538 4.1705   12 1.2039 0.1282 26.142, 41.218 0.76
C57BL/6NCrl m 31.175 4.0445   12 1.1675 0.1297 26.215, 38.346 1.09
C57BL/6NJ f 30.798 5.1777   12 1.4947 0.1681 23.812, 38.503 0.5
C57BL/6NJ m 28.332 5.3008   12 1.5302 0.1871 17.174, 37.375 0.54
CBA/J f 32.809 3.891   12 1.1232 0.1186 28.164, 41.362 0.8
CBA/J m 28.753 7.7263   12 2.2304 0.2687 16.99, 41.553 0.62
DBA/1J f 27.673 5.1758   11 1.5606 0.187 17.382, 36.211 0.04
DBA/1J m 27.667 4.3553   12 1.2573 0.1574 19.096, 32.378 0.41
DBA/2J f 27.641 5.966   12 1.7222 0.2158 17.622, 37.592 0.03
DBA/2J m 29.847 7.5934   11 2.2895 0.2544 16.175, 40.865 0.83
FVB/NJ f 22.705 3.6184   12 1.0445 0.1594 16.504, 28.799 -0.7
FVB/NJ m 19.212 4.3199   12 1.2471 0.2249 14.896, 27.849 -1.21
KK/HlJ f 22.065 6.0471   12 1.7457 0.2741 10.122, 29.621 -0.8
KK/HlJ m 20.133 4.3457   12 1.2545 0.2158 8.7528, 25.568 -1.03
LG/J f 24.079 3.1986   12 0.92337 0.1328 19.214, 31.326 -0.5
LG/J m 24.303 4.0627   12 1.1728 0.1672 16.074, 33.712 -0.23
LP/J f 26.279 4.2811   10 1.3538 0.1629 20.087, 32.485 -0.17
LP/J m 28.893 8.0912   11 2.4396 0.28 15.507, 37.999 0.65
MA/MyJ f 29.136 6.3764   10 2.0164 0.2188 20.254, 39.293 0.25
MA/MyJ m 28.247 3.2533   9 1.0844 0.1152 21.139, 31.453 0.53
MRL/MpJ f 27.231 3.7494   12 1.0824 0.1377 20.199, 32.393 -0.03
MRL/MpJ m 25.585 5.628   12 1.6247 0.22 8.7597, 31.021 0.02
NOD/ShiLtJ f 51.77 59.31   12 17.121 1.1456 27.147, 239.5 3.61
NOD/ShiLtJ m 28.083 5.4375   12 1.5697 0.1936 16.885, 35.764 0.49
NON/ShiLtJ f 24.185 5.7707   10 1.8249 0.2386 13.04, 30.147 -0.48
NON/ShiLtJ m 25.576 3.9582   12 1.1426 0.1548 20.507, 34.235 0.01
NZB/BlNJ f 17.699 4.5696   12 1.3191 0.2582 10.922, 24.646 -1.44
NZB/BlNJ m 16.513 4.9859   12 1.4393 0.3019 9.9667, 28.289 -1.72
NZO/HlLtJ f 20.552 4.185   12 1.2081 0.2036 14.808, 30.942 -1.02
NZO/HlLtJ m 19.821 4.8184   10 1.5237 0.2431 13.656, 27.411 -1.09
NZW/LacJ f 19.964 3.6142   12 1.0433 0.181 13.935, 27.394 -1.11
NZW/LacJ m 15.958 3.335   11 1.0055 0.209 10.154, 22.283 -1.83
RIIIS/J f 25.186 5.1765   11 1.5608 0.2055 16.026, 32.428 -0.33
RIIIS/J m 22.759 1.2722   9 0.42405 0.0559 20.615, 25.022 -0.53
SJL/J f 29.922 19.027   11 5.7367 0.6359 17.407, 75.04 0.37
SJL/J m 19.192 5.5597   12 1.605 0.2897 10.489, 28.938 -1.21
SM/J f 28.917 6.1909   9 2.0636 0.2141 19.011, 36.888 0.22
SM/J m 23.735 5.941   9 1.9803 0.2503 14.974, 30.974 -0.34
SWR/J f 22.307 9.9334   9 3.3111 0.4453 14.66, 47.029 -0.76
SWR/J m 15.385 2.7318   9 0.9106 0.1776 10.669, 19.274 -1.94


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 20.0959166667 2.8124144669 25.6190885187 14.5727448146
129S1/SvImJ m 29.132 3.0808456891 35.1823316247 23.0816683753
129X1/SvJ f 21.9505 3.9773546821 29.7614445405 14.1395554595
129X1/SvJ m 22.758125 3.4444901945 29.5226013996 15.9936486004
A/J f 23.00575 2.8124144669 28.5289218521 17.4825781479
A/J m 25.762 2.8124144669 31.2851718521 20.2388281479
AKR/J f 31.518 2.8124144669 37.0411718521 25.9948281479
AKR/J m 28.8284545455 2.9374711078 34.5972194021 23.0596896888
BALB/cJ f 29.3759090909 2.9374711078 35.1446739476 23.6071442342
BALB/cJ m 30.4688181818 2.9374711078 36.2375830385 24.7000533251
BTBR T+ Itpr3tf/J f 23.3501666667 2.8124144669 28.8733385187 17.8269948146
BTBR T+ Itpr3tf/J m 23.3306666667 2.8124144669 28.8538385187 17.8074948146
BUB/BnJ f 37.7962727273 2.9374711078 43.5650375839 32.0275078706
BUB/BnJ m 36.8825454545 2.9374711078 42.6513103112 31.1137805979
C3H/HeJ f 24.5484166667 2.8124144669 30.0715885187 19.0252448146
C3H/HeJ m 25.7825833333 2.8124144669 31.3057551854 20.2594114813
C3H/HeOuJ f 32.3635833333 2.8124144669 37.8867551854 26.8404114813
C3H/HeOuJ m 31.9001666667 2.8124144669 37.4233385187 26.3769948146
C57BL/6J f 35.6031666667 2.8124144669 41.1263385187 30.0799948146
C57BL/6J m 31.0503333333 2.8124144669 36.5735051854 25.5271614813
C57BL/6NCrl f 32.5383333333 2.8124144669 38.0615051854 27.0151614813
C57BL/6NCrl m 31.1745833333 2.8124144669 36.6977551854 25.6514114813
C57BL/6NJ f 30.7975833333 2.8124144669 36.3207551854 25.2744114813
C57BL/6NJ m 28.3325 2.8124144669 33.8556718521 22.8093281479
CBA/J f 32.809 2.8124144669 38.3321718521 27.2858281479
CBA/J m 28.7534166667 2.8124144669 34.2765885187 23.2302448146
DBA/1J f 27.6731818182 2.9374711078 33.4419466749 21.9044169615
DBA/1J m 27.6673333333 2.8124144669 33.1905051854 22.1441614813
DBA/2J f 27.6415 2.8124144669 33.1646718521 22.1183281479
DBA/2J m 29.8469090909 2.9374711078 35.6156739476 24.0781442342
FVB/NJ f 22.7045833333 2.8124144669 28.2277551854 17.1814114813
FVB/NJ m 19.2121666667 2.8124144669 24.7353385187 13.6889948146
KK/HlJ f 22.06475 2.8124144669 27.5879218521 16.5415781479
KK/HlJ m 20.1333166667 2.8124144669 25.6564885187 14.6101448146
LG/J f 24.0794166667 2.8124144669 29.6025885187 18.5562448146
LG/J m 24.30325 2.8124144669 29.8264218521 18.7800781479
LP/J f 26.2791 3.0808456891 32.3294316247 20.2287683753
LP/J m 28.8934545455 2.9374711078 34.6622194021 23.1246896888
MA/MyJ f 29.136 3.0808456891 35.1863316247 23.0856683753
MA/MyJ m 28.2474444444 3.2474964991 34.6250539556 21.8698349333
MRL/MpJ f 27.231 2.8124144669 32.7541718521 21.7078281479
MRL/MpJ m 25.585475 2.8124144669 31.1086468521 20.0623031479
NOD/ShiLtJ f 51.7708333333 2.8124144669 57.2940051854 46.2476614813
NOD/ShiLtJ m 28.083 2.8124144669 33.6061718521 22.5598281479
NON/ShiLtJ f 24.1847 3.0808456891 30.2350316247 18.1343683753
NON/ShiLtJ m 25.57575 2.8124144669 31.0989218521 20.0525781479
NZB/BlNJ f 17.6988333333 2.8124144669 23.2220051854 12.1756614813
NZB/BlNJ m 16.512975 2.8124144669 22.0361468521 10.9898031479
NZO/HlLtJ f 20.552 2.8124144669 26.0751718521 15.0288281479
NZO/HlLtJ m 19.8213 3.0808456891 25.8716316247 13.7709683753
NZW/LacJ f 19.9639166667 2.8124144669 25.4870885187 14.4407448146
NZW/LacJ m 15.9577272727 2.9374711078 21.7264921294 10.1889624161
RIIIS/J f 25.1861818182 2.9374711078 30.9549466749 19.4174169615
RIIIS/J m 22.7592222222 3.2474964991 29.1368317334 16.3816127111
SJL/J f 29.9223636364 2.9374711078 35.691128493 24.1535987797
SJL/J m 19.1915 2.8124144669 24.7146718521 13.6683281479
SM/J f 28.9172222222 3.2474964991 35.2948317334 22.5396127111
SM/J m 23.7351111111 3.2474964991 30.1127206222 17.3575016
SWR/J f 22.3073333333 3.2474964991 28.6849428445 15.9297238222
SWR/J m 15.3848888889 3.2474964991 21.7624984 9.0072793778


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 24.6139583333 2.0857423914 28.7100522067 20.51786446
129X1/SvJ both 22.3543125 2.6307728412 27.5207666897 17.1878583103
A/J both 24.383875 1.988677341 28.2893472702 20.4784027298
AKR/J both 30.1732272727 2.0333723001 34.1664739242 26.1799806212
BALB/cJ both 29.9223636364 2.0771057399 34.0014963856 25.8432308871
BTBR T+ Itpr3tf/J both 23.3404166667 1.988677341 27.2458889369 19.4349443964
BUB/BnJ both 37.3394090909 2.0771057399 41.4185418401 33.2602763417
C3H/HeJ both 25.1655 1.988677341 29.0709722702 21.2600277298
C3H/HeOuJ both 32.131875 1.988677341 36.0373472702 28.2264027298
C57BL/6J both 33.32675 1.988677341 37.2322222702 29.4212777298
C57BL/6NCrl both 31.8564583333 1.988677341 35.7619306036 27.9509860631
C57BL/6NJ both 29.5650416667 1.988677341 33.4705139369 25.6595693964
CBA/J both 30.7812083333 1.988677341 34.6866806036 26.8757360631
DBA/1J both 27.6702575758 2.0333723001 31.6635042273 23.6770109243
DBA/2J both 28.7442045455 2.0333723001 32.737451197 24.750957894
FVB/NJ both 20.958375 1.988677341 24.8638472702 17.0529027298
KK/HlJ both 21.0990333333 1.988677341 25.0045056036 17.1935610631
LG/J both 24.1913333333 1.988677341 28.0968056036 20.2858610631
LP/J both 27.5862772727 2.1284000252 31.7661445176 23.4064100278
MA/MyJ both 28.6917222222 2.2381825033 33.0871862434 24.2962582011
MRL/MpJ both 26.4082375 1.988677341 30.3137097702 22.5027652298
NOD/ShiLtJ both 39.9269166667 1.988677341 43.8323889369 36.0214443964
NON/ShiLtJ both 24.880225 2.0857423914 28.9763188733 20.7841311267
NZB/BlNJ both 17.1059041667 1.988677341 21.0113764369 13.2004318964
NZO/HlLtJ both 20.18665 2.0857423914 24.2827438733 16.0905561267
NZW/LacJ both 17.9608219697 2.0333723001 21.9540686212 13.9675753182
RIIIS/J both 23.9727020202 2.189461693 28.2724854754 19.672918565
SJL/J both 24.5569318182 2.0333723001 28.5501784697 20.5636851667
SM/J both 26.3261666667 2.2963267964 30.8358175997 21.8165157336
SWR/J both 18.8461111111 2.2963267964 23.3557620442 14.336460178




  GWAS USING LINEAR MIXED MODELS