Project measure / variable:   Zimmermann1   fine_act_light

ID, description, units MPD:112172   fine_act_light   fine or stationary movement on x-y axis, repeated interruptions of same beam, second day (beam breaks/min)   [n/min]  during light  
Data set, strains Zimmermann1   inbred   30 strains     sex: both     age: 7-15wks
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  STRAIN COMPARISON PLOT
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Zimmermann1 - fine or stationary movement on x-y axis, repeated interruptions of same beam, second day (beam breaks/min) during light



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means15.033   n/min 14.033   n/min
Median of the strain means14.084   n/min 13.98   n/min
SD of the strain means± 4.0363 ± 3.1008
Coefficient of variation (CV)0.2685 0.221
Min–max range of strain means8.6643   –   24.193   n/min 8.8559   –   21.135   n/min
Mean sample size per strain11.2   mice 11.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 205.7041 205.7041 14.1921 0.0002
strain 29 7330.5983 252.7793 17.4399 < 0.0001
sex:strain 29 1180.7699 40.7162 2.8091 < 0.0001
Residuals 611 8856.0068 14.4943


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 12.68 4.3728   12 1.2623 0.3449 6.1597, 22.21 -0.58
129S1/SvImJ m 12.942 3.7213   10 1.1768 0.2875 8.1472, 21.304 -0.35
129X1/SvJ f 10.685 2.8529   6 1.1647 0.267 5.8222, 13.551 -1.08
129X1/SvJ m 13.15 3.572   8 1.2629 0.2716 8.0569, 17.875 -0.28
A/J f 10.994 2.1638   12 0.62463 0.1968 8.9972, 15.572 -1.0
A/J m 9.7847 2.3065   12 0.66582 0.2357 4.7458, 12.606 -1.37
AKR/J f 12.321 2.1514   12 0.62105 0.1746 9.7653, 16.572 -0.67
AKR/J m 10.446 2.7884   11 0.84075 0.2669 4.1972, 13.818 -1.16
BALB/cJ f 24.193 4.0453   11 1.2197 0.1672 17.657, 33.087 2.27
BALB/cJ m 14.041 4.3017   11 1.297 0.3064 5.9403, 19.536 0.0
BTBR T+ Itpr3tf/J f 16.079 2.3896   12 0.68982 0.1486 11.471, 19.817 0.26
BTBR T+ Itpr3tf/J m 13.92 3.0299   12 0.87465 0.2177 8.1833, 19.768 -0.04
BUB/BnJ f 18.317 3.0946   11 0.93306 0.1689 12.004, 22.258 0.81
BUB/BnJ m 18.241 3.8868   11 1.1719 0.2131 12.011, 24.337 1.36
C3H/HeJ f 12.399 2.486   12 0.71763 0.2005 7.9722, 15.542 -0.65
C3H/HeJ m 15.203 2.2724   12 0.65599 0.1495 11.586, 19.414 0.38
C3H/HeOuJ f 20.918 4.4341   12 1.28 0.212 13.06, 26.538 1.46
C3H/HeOuJ m 18.499 3.3122   12 0.95616 0.179 12.964, 22.629 1.44
C57BL/6J f 13.472 1.4977   12 0.43235 0.1112 10.817, 15.625 -0.39
C57BL/6J m 10.339 1.7323   12 0.50008 0.1675 7.6722, 13.76 -1.19
C57BL/6NCrl f 17.355 2.816   12 0.81292 0.1623 14.444, 23.107 0.58
C57BL/6NCrl m 14.083 1.7973   12 0.51884 0.1276 11.838, 18.082 0.02
C57BL/6NJ f 16.755 3.6567   12 1.0556 0.2182 11.542, 24.249 0.43
C57BL/6NJ m 15.665 3.1023   12 0.89554 0.198 9.1569, 21.868 0.53
CBA/J f 14.092 3.4742   12 1.0029 0.2465 7.4931, 19.11 -0.23
CBA/J m 14.915 2.4768   12 0.71499 0.1661 10.668, 19.194 0.28
DBA/1J f 8.6643 2.9154   11 0.87902 0.3365 4.2889, 16.199 -1.58
DBA/1J m 8.8607 2.0137   12 0.58129 0.2273 6.3597, 13.204 -1.67
DBA/2J f 11.763 4.1026   12 1.1843 0.3488 5.4792, 19.421 -0.81
DBA/2J m 10.919 4.3148   11 1.301 0.3952 3.2417, 19.056 -1.0
FVB/NJ f 24.086 3.4219   12 0.98782 0.1421 18.312, 29.278 2.24
FVB/NJ m 17.401 3.2997   12 0.95253 0.1896 13.186, 23.406 1.09
KK/HlJ f 10.146 3.0776   12 0.88841 0.3033 3.8792, 13.453 -1.21
KK/HlJ m 10.137 2.7369   12 0.79006 0.27 3.6833, 13.849 -1.26
LG/J f 19.566 5.883   12 1.6983 0.3007 11.585, 33.699 1.12
LG/J m 19.516 4.4755   12 1.292 0.2293 13.242, 29.336 1.77
LP/J f 16.27 3.4525   10 1.0918 0.2122 9.3278, 19.681 0.31
LP/J m 14.796 4.0205   11 1.2122 0.2717 8.2472, 20.694 0.25
MA/MyJ f 13.999 2.9264   10 0.9254 0.209 8.9708, 18.371 -0.26
MA/MyJ m 14.413 2.8115   9 0.93716 0.1951 11.258, 19.815 0.12
MRL/MpJ f 14.076 2.1716   12 0.62688 0.1543 10.226, 17.153 -0.24
MRL/MpJ m 12.052 1.7305   12 0.49955 0.1436 8.9653, 14.696 -0.64
NOD/ShiLtJ f 20.857 14.221   12 4.1051 0.6818 13.453, 65.4 1.44
NOD/ShiLtJ m 16.225 4.7947   12 1.3841 0.2955 7.5694, 23.533 0.71
NON/ShiLtJ f 13.497 3.0488   10 0.96411 0.2259 6.3236, 16.625 -0.38
NON/ShiLtJ m 13.824 2.0355   12 0.5876 0.1472 10.004, 16.961 -0.07
NZB/BlNJ f 9.2752 2.1925   12 0.63291 0.2364 5.3736, 12.608 -1.43
NZB/BlNJ m 8.8559 3.119   12 0.90037 0.3522 4.8194, 14.91 -1.67
NZO/HlLtJ f 11.296 2.5611   12 0.73931 0.2267 4.8403, 14.817 -0.93
NZO/HlLtJ m 12.763 2.2021   10 0.69637 0.1725 8.5139, 16.293 -0.41
NZW/LacJ f 14.221 2.1831   12 0.6302 0.1535 11.067, 19.581 -0.2
NZW/LacJ m 13.323 2.7581   11 0.8316 0.207 8.7542, 16.485 -0.23
RIIIS/J f 15.847 2.4786   11 0.74731 0.1564 12.89, 19.514 0.2
RIIIS/J m 16.346 2.8001   9 0.93338 0.1713 12.143, 21.7 0.75
SJL/J f 16.434 4.4751   11 1.3493 0.2723 10.297, 24.161 0.35
SJL/J m 15.583 2.9863   12 0.86208 0.1916 9.6292, 19.165 0.5
SM/J f 17.273 4.1037   9 1.3679 0.2376 12.81, 24.018 0.55
SM/J m 21.135 6.4654   9 2.1551 0.3059 14.471, 32.428 2.29
SWR/J f 13.468 5.6978   9 1.8993 0.4231 9.4722, 28.243 -0.39
SWR/J m 13.606 3.6117   9 1.2039 0.2654 9.5472, 20.708 -0.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 12.6798666667 1.0990254341 14.838192338 10.5215409953
129S1/SvImJ m 12.94179 1.2039220431 15.3061173133 10.5774626867
129X1/SvJ f 10.68495 1.5542566743 13.7372834365 7.6326165635
129X1/SvJ m 13.1498125 1.346025764 15.7932107968 10.5064142032
A/J f 10.9943333333 1.0990254341 13.1526590047 8.836007662
A/J m 9.7846916667 1.0990254341 11.943017338 7.6263659953
AKR/J f 12.3211916667 1.0990254341 14.479517338 10.1628659953
AKR/J m 10.4461363636 1.1478946284 12.7004340056 8.1918387217
BALB/cJ f 24.1929090909 1.1478946284 26.4472067329 21.9386114489
BALB/cJ m 14.0405727273 1.1478946284 16.2948703693 11.7862750853
BTBR T+ Itpr3tf/J f 16.0791666667 1.0990254341 18.237492338 13.9208409953
BTBR T+ Itpr3tf/J m 13.9196083333 1.0990254341 16.0779340047 11.761282662
BUB/BnJ f 18.3173636364 1.1478946284 20.5716612783 16.0630659944
BUB/BnJ m 18.2410909091 1.1478946284 20.4953885511 15.9867932671
C3H/HeJ f 12.3988083333 1.0990254341 14.5571340047 10.240482662
C3H/HeJ m 15.20275 1.0990254341 17.3610756714 13.0444243286
C3H/HeOuJ f 20.9181666667 1.0990254341 23.076492338 18.7598409953
C3H/HeOuJ m 18.4991666667 1.0990254341 20.657492338 16.3408409953
C57BL/6J f 13.472 1.0990254341 15.6303256714 11.3136743286
C57BL/6J m 10.339225 1.0990254341 12.4975506714 8.1808993286
C57BL/6NCrl f 17.3546666667 1.0990254341 19.512992338 15.1963409953
C57BL/6NCrl m 14.08325 1.0990254341 16.2415756714 11.9249243286
C57BL/6NJ f 16.7549166667 1.0990254341 18.913242338 14.5965909953
C57BL/6NJ m 15.6649083333 1.0990254341 17.8232340047 13.506582662
CBA/J f 14.091925 1.0990254341 16.2502506714 11.9335993286
CBA/J m 14.9145833333 1.0990254341 17.0729090047 12.756257662
DBA/1J f 8.6643 1.1478946284 10.918597642 6.410002358
DBA/1J m 8.8607166667 1.0990254341 11.019042338 6.7023909953
DBA/2J f 11.7626333333 1.0990254341 13.9209590047 9.604307662
DBA/2J m 10.9192272727 1.1478946284 13.1735249147 8.6649296307
FVB/NJ f 24.086 1.0990254341 26.2443256714 21.9276743286
FVB/NJ m 17.40075 1.0990254341 19.5590756714 15.2424243286
KK/HlJ f 10.1462833333 1.0990254341 12.3046090047 7.987957662
KK/HlJ m 10.13665 1.0990254341 12.2949756714 7.9783243286
LG/J f 19.5660833333 1.0990254341 21.7244090047 17.407757662
LG/J m 19.5163333333 1.0990254341 21.6746590047 17.358007662
LP/J f 16.26968 1.2039220431 18.6340073133 13.9053526867
LP/J m 14.7960181818 1.1478946284 17.0503158238 12.5417205398
MA/MyJ f 13.99948 1.2039220431 16.3638073133 11.6351526867
MA/MyJ m 14.4134444444 1.2690452605 16.9056642592 11.9212246297
MRL/MpJ f 14.0756666667 1.0990254341 16.233992338 11.9173409953
MRL/MpJ m 12.052 1.0990254341 14.2103256714 9.8936743286
NOD/ShiLtJ f 20.8568333333 1.0990254341 23.0151590047 18.698507662
NOD/ShiLtJ m 16.2249 1.0990254341 18.3832256714 14.0665743286
NON/ShiLtJ f 13.49726 1.2039220431 15.8615873133 11.1329326867
NON/ShiLtJ m 13.8243333333 1.0990254341 15.9826590047 11.666007662
NZB/BlNJ f 9.2752416667 1.0990254341 11.433567338 7.1169159953
NZB/BlNJ m 8.8558833333 1.0990254341 11.0142090047 6.697557662
NZO/HlLtJ f 11.2955416667 1.0990254341 13.453867338 9.1372159953
NZO/HlLtJ m 12.76299 1.2039220431 15.1273173133 10.3986626867
NZW/LacJ f 14.2210833333 1.0990254341 16.3794090047 12.062757662
NZW/LacJ m 13.3233636364 1.1478946284 15.5776612783 11.0690659944
RIIIS/J f 15.8465454545 1.1478946284 18.1008430965 13.5922478126
RIIIS/J m 16.3458888889 1.2690452605 18.8381087036 13.8536690741
SJL/J f 16.4340909091 1.1478946284 18.6883885511 14.1797932671
SJL/J m 15.5826833333 1.0990254341 17.7410090047 13.424357662
SM/J f 17.2731111111 1.2690452605 19.7653309259 14.7808912964
SM/J m 21.1347777778 1.2690452605 23.6269975925 18.642557963
SWR/J f 13.4682444444 1.2690452605 15.9604642592 10.9760246297
SWR/J m 13.6064666667 1.2690452605 16.0986864814 11.1142468519


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 12.8108283333 0.8150590762 14.4114854912 11.2101711755
129X1/SvJ both 11.91738125 1.0280441585 13.9363100478 9.8984524522
A/J both 10.3895125 0.7771283372 11.9156792182 8.8633457818
AKR/J both 11.3836640152 0.7945940761 12.9441308974 9.8231971329
BALB/cJ both 19.1167409091 0.8116840759 20.7107700585 17.5227117596
BTBR T+ Itpr3tf/J both 14.9993875 0.7771283372 16.5255542182 13.4732207818
BUB/BnJ both 18.2792272727 0.8116840759 19.8732564222 16.6851981233
C3H/HeJ both 13.8007791667 0.7771283372 15.3269458849 12.2746124484
C3H/HeOuJ both 19.7086666667 0.7771283372 21.2348333849 18.1824999484
C57BL/6J both 11.9056125 0.7771283372 13.4317792182 10.3794457818
C57BL/6NCrl both 15.7189583333 0.7771283372 17.2451250516 14.1927916151
C57BL/6NJ both 16.2099125 0.7771283372 17.7360792182 14.6837457818
CBA/J both 14.5032541667 0.7771283372 16.0294208849 12.9770874484
DBA/1J both 8.7625083333 0.7945940761 10.3229752156 7.2020414511
DBA/2J both 11.340930303 0.7945940761 12.9013971853 9.7804634208
FVB/NJ both 20.743375 0.7771283372 22.2695417182 19.2172082818
KK/HlJ both 10.1414666667 0.7771283372 11.6676333849 8.6152999484
LG/J both 19.5412083333 0.7771283372 21.0673750516 18.0150416151
LP/J both 15.5328490909 0.8317286763 17.1662429123 13.8994552695
MA/MyJ both 14.2064622222 0.8746290869 15.9241061936 12.4888182509
MRL/MpJ both 13.0638333333 0.7771283372 14.5900000516 11.5376666151
NOD/ShiLtJ both 18.5408666667 0.7771283372 20.0670333849 17.0146999484
NON/ShiLtJ both 13.6607966667 0.8150590762 15.2614538245 12.0601395088
NZB/BlNJ both 9.0655625 0.7771283372 10.5917292182 7.5393957818
NZO/HlLtJ both 12.0292658333 0.8150590762 13.6299229912 10.4286086755
NZW/LacJ both 13.7722234848 0.7945940761 15.3326903671 12.2117566026
RIIIS/J both 16.0962171717 0.8555901401 17.776471428 14.4159629154
SJL/J both 16.0083871212 0.7945940761 17.5688540035 14.447920239
SM/J both 19.2039444444 0.8973505093 20.9662099757 17.4416789132
SWR/J both 13.5373555556 0.8973505093 15.2996210868 11.7750900243




  GWAS USING LINEAR MIXED MODELS