Project measure / variable:   Auwerx1   liver_wt_CD

ID, description, units MPD:111406   liver_wt_CD   liver weight   [g]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 29wks
Procedure organ weights
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - liver weight CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means1.5098   g
Median of the strain means1.3639   g
SD of the strain means± 0.47696
Coefficient of variation (CV)0.3159
Min–max range of strain means0.944   –   3.1643   g
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 51.2298 0.9315 12.2044 < 0.0001
Residuals 183 13.9667 0.0763


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 1.0872 0.08473   5 0.03789 0.0779 0.9903, 1.1661 -0.89
BXD100 m 1.699 0.44447   3 0.25661 0.2616 1.2262, 2.1083 0.4
BXD101 m 1.2991 0.14338   4 0.07169 0.1104 1.1498, 1.4938 -0.44
BXD11 m 1.1816 0.16058   2   0.11355 0.1359 1.068, 1.2951 -0.69
BXD12 m 1.2639 0.17296   5 0.07735 0.1369 1.06, 1.481 -0.52
BXD16 m 2.904 0.84055   4 0.42027 0.2894 1.696, 3.64 2.92
BXD2 m 1.5502 0.1004   3 0.05797 0.0648 1.4367, 1.6275 0.08
BXD27 m 1.2842 0.1276   5 0.05707 0.0994 1.0835, 1.3982 -0.47
BXD32 m 1.3449 0.19919   5 0.08908 0.1481 1.1494, 1.56 -0.35
BXD34 m 1.3639 0.07999   4 0.03999 0.0586 1.2531, 1.432 -0.31
BXD39 m 1.8094 0.34951   5 0.15631 0.1932 1.403, 2.264 0.63
BXD40 m 0.944 0.0   1   0.0 0.0 0.944, 0.944 -1.19
BXD43 m 1.0393 0.05814   3 0.03357 0.0559 0.9794, 1.0955 -0.99
BXD44 m 1.331 0.29514   9 0.09838 0.2217 0.9189, 2.0187 -0.37
BXD45 m 1.6483 0.10912   4 0.05456 0.0662 1.5542, 1.7929 0.29
BXD48 m 1.1874 0.10313   5 0.04612 0.0869 1.0947, 1.3517 -0.68
BXD48a m 1.8464 0.34461   5 0.15411 0.1866 1.4639, 2.193 0.71
BXD49 m 1.7725 0.11607   4 0.05804 0.0655 1.645, 1.9267 0.55
BXD50 m 1.1857 0.07775   4 0.03888 0.0656 1.0806, 1.2603 -0.68
BXD51 m 1.3786 0.15532   3 0.08967 0.1127 1.207, 1.5096 -0.28
BXD53 m 1.3151 0.32317   5 0.14452 0.2457 1.004, 1.82 -0.41
BXD55 m 1.46 0.12722   4 0.06361 0.0871 1.3461, 1.6173 -0.1
BXD56 m 1.2849 0.09111   3 0.0526 0.0709 1.1797, 1.3377 -0.47
BXD6 m 1.4016 0.12431   5 0.05559 0.0887 1.27, 1.57 -0.23
BXD60 m 3.1643 0.64935   4 0.32467 0.2052 2.46, 4.021 3.47
BXD61 m 1.6609 0.37956   3 0.21914 0.2285 1.2674, 2.0248 0.32
BXD62 m 1.1908 0.17057   4 0.08529 0.1432 1.0186, 1.3981 -0.67
BXD63 m 1.0383 0.12148   3 0.07014 0.117 0.9032, 1.1385 -0.99
BXD64 m 1.1439 0.05668   4 0.02834 0.0496 1.0753, 1.2043 -0.77
BXD65 m 2.8077 0.45738   4 0.22869 0.1629 2.2651, 3.3466 2.72
BXD65a m 2.5529 0.28648   5 0.12812 0.1122 2.2725, 3.02 2.19
BXD65b m 2.5404 0.41415   4 0.20707 0.163 2.1461, 2.9892 2.16
BXD66 m 1.8984 0.2884   5 0.12898 0.1519 1.5566, 2.2633 0.81
BXD67 m 1.9316 0.47371   5 0.21185 0.2452 1.357, 2.475 0.88
BXD68 m 1.9724 0.38168   3 0.22036 0.1935 1.537, 2.2491 0.97
BXD69 m 1.824 0.08982   5 0.04017 0.0492 1.7273, 1.9652 0.66
BXD70 m 1.3839 0.60644   4 0.30322 0.4382 0.9283, 2.2756 -0.26
BXD71 m 1.4004 0.11918   4 0.05959 0.0851 1.3096, 1.5609 -0.23
BXD73 m 1.1302 0.17765   4 0.08882 0.1572 1.0059, 1.3926 -0.8
BXD73a m 1.369 0.11479   5 0.05134 0.0839 1.2423, 1.4939 -0.3
BXD73b m 1.2778 0.17934   5 0.0802 0.1404 1.1211, 1.5533 -0.49
BXD75 m 1.3967 0.23305   5 0.10422 0.1669 1.1257, 1.6588 -0.24
BXD77 m 1.1488 0.24608   5 0.11005 0.2142 0.8498, 1.448 -0.76
BXD79 m 1.5231 0.26427   5 0.11819 0.1735 1.1392, 1.7895 0.03
BXD8 m 1.1389 0.12761   4 0.06381 0.112 0.9906, 1.302 -0.78
BXD81 m 1.1796 0.25497   4 0.12749 0.2162 0.8318, 1.4451 -0.69
BXD83 m 1.0612 0.11034   3 0.06371 0.104 0.9587, 1.178 -0.94
BXD84 m 1.4624 0.1466   3 0.08464 0.1002 1.316, 1.6092 -0.1
BXD85 m 1.7927 0.30978   5 0.13854 0.1728 1.5276, 2.3071 0.59
BXD87 m 1.1893 0.14736   5 0.0659 0.1239 1.0196, 1.3336 -0.67
BXD89 m 1.0905 0.06796   4 0.03398 0.0623 1.006, 1.1719 -0.88
BXD90 m 1.2896 0.34058   4 0.17029 0.2641 1.0785, 1.7971 -0.46
BXD95 m 1.2931 0.14075   4 0.07037 0.1088 1.1293, 1.4449 -0.45
BXD98 m 1.3606 0.19147   4 0.09573 0.1407 1.1173, 1.5553 -0.31
BXD99 m 1.3018 0.13224   5 0.05914 0.1016 1.1135, 1.4505 -0.44
C57BL/6J m 1.5786 0.22309   5 0.09977 0.1413 1.2389, 1.7781 0.14
DBA/2J m 1.382 0.19073   4 0.09537 0.138 1.2625, 1.6668 -0.27


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 1.0872 0.1235483028 1.3309622734 0.8434377266
BXD100 m 1.699 0.159500173 2.0136957418 1.3843042582
BXD101 m 1.2991 0.1381312017 1.5716345069 1.0265654931
BXD11 m 1.18155 0.1953470189 1.5669719959 0.7961280041
BXD12 m 1.26386 0.1235483028 1.5076222734 1.0200977266
BXD16 m 2.904 0.1381312017 3.1765345069 2.6314654931
BXD2 m 1.5501666667 0.159500173 1.8648624085 1.2354709248
BXD27 m 1.28424 0.1235483028 1.5280022734 1.0404777266
BXD32 m 1.34486 0.1235483028 1.5886222734 1.1010977266
BXD34 m 1.3639 0.1381312017 1.6364345069 1.0913654931
BXD39 m 1.8094 0.1235483028 2.0531622734 1.5656377266
BXD43 m 1.0393 0.159500173 1.3539957418 0.7246042582
BXD44 m 1.331 0.0920874678 1.5126896713 1.1493103287
BXD45 m 1.648325 0.1381312017 1.9208595069 1.3757904931
BXD48 m 1.18744 0.1235483028 1.4312022734 0.9436777266
BXD48a m 1.84636 0.1235483028 2.0901222734 1.6025977266
BXD49 m 1.7725 0.1381312017 2.0450345069 1.4999654931
BXD50 m 1.18575 0.1381312017 1.4582845069 0.9132154931
BXD51 m 1.3785666667 0.159500173 1.6932624085 1.0638709248
BXD53 m 1.31512 0.1235483028 1.5588822734 1.0713577266
BXD55 m 1.460025 0.1381312017 1.7325595069 1.1874904931
BXD56 m 1.2849 0.159500173 1.5995957418 0.9702042582
BXD6 m 1.4016 0.1235483028 1.6453622734 1.1578377266
BXD60 m 3.164325 0.1381312017 3.4368595069 2.8917904931
BXD61 m 1.6608666667 0.159500173 1.9755624085 1.3461709248
BXD62 m 1.190825 0.1381312017 1.4633595069 0.9182904931
BXD63 m 1.0383333333 0.159500173 1.3530290752 0.7236375915
BXD64 m 1.14395 0.1381312017 1.4164845069 0.8714154931
BXD65 m 2.807675 0.1381312017 3.0802095069 2.5351404931
BXD65a m 2.5529 0.1235483028 2.7966622734 2.3091377266
BXD65b m 2.54045 0.1381312017 2.8129845069 2.2679154931
BXD66 m 1.89842 0.1235483028 2.1421822734 1.6546577266
BXD67 m 1.93158 0.1235483028 2.1753422734 1.6878177266
BXD68 m 1.9724333333 0.159500173 2.2871290752 1.6577375915
BXD69 m 1.82404 0.1235483028 2.0678022734 1.5802777266
BXD70 m 1.3839 0.1381312017 1.6564345069 1.1113654931
BXD71 m 1.400425 0.1381312017 1.6729595069 1.1278904931
BXD73 m 1.130175 0.1381312017 1.4027095069 0.8576404931
BXD73a m 1.36896 0.1235483028 1.6127222734 1.1251977266
BXD73b m 1.27782 0.1235483028 1.5215822734 1.0340577266
BXD75 m 1.39666 0.1235483028 1.6404222734 1.1528977266
BXD77 m 1.14878 0.1235483028 1.3925422734 0.9050177266
BXD79 m 1.52314 0.1235483028 1.7669022734 1.2793777266
BXD8 m 1.138925 0.1381312017 1.4114595069 0.8663904931
BXD81 m 1.179575 0.1381312017 1.4521095069 0.9070404931
BXD83 m 1.0612333333 0.159500173 1.3759290752 0.7465375915
BXD84 m 1.4624 0.159500173 1.7770957418 1.1477042582
BXD85 m 1.7927 0.1235483028 2.0364622734 1.5489377266
BXD87 m 1.18926 0.1235483028 1.4330222734 0.9454977266
BXD89 m 1.09055 0.1381312017 1.3630845069 0.8180154931
BXD90 m 1.2896 0.1381312017 1.5621345069 1.0170654931
BXD95 m 1.293125 0.1381312017 1.5656595069 1.0205904931
BXD98 m 1.360625 0.1381312017 1.6331595069 1.0880904931
BXD99 m 1.30182 0.1235483028 1.5455822734 1.0580577266
C57BL/6J m 1.57862 0.1235483028 1.8223822734 1.3348577266
DBA/2J m 1.382025 0.1381312017 1.6545595069 1.1094904931




  GWAS USING LINEAR MIXED MODELS