Project measure / variable:   Auwerx1   muscle_wt_CD

ID, description, units MPD:111400   muscle_wt_CD   skeletal muscle weight   [g]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 29wks
Procedure organ weights
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - skeletal muscle weight CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means0.29293   g
Median of the strain means0.2899   g
SD of the strain means± 0.03114
Coefficient of variation (CV)0.1063
Min–max range of strain means0.22073   –   0.36467   g
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 0.23 0.0041 5.8649 < 0.0001
Residuals 185 0.1296 0.0007


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 0.26058 0.02871   5 0.01284 0.1102 0.2232, 0.2954 -1.04
BXD100 m 0.32173 0.03793   3 0.0219 0.1179 0.2781, 0.3468 0.92
BXD101 m 0.26733 0.01617   3 0.00933333 0.0605 0.25, 0.282 -0.82
BXD11 m 0.267 0.02263   2   0.016 0.0847 0.251, 0.283 -0.83
BXD12 m 0.28378 0.028   5 0.01252 0.0987 0.2391, 0.315 -0.29
BXD16 m 0.355 0.02012   4 0.01006 0.0567 0.332, 0.381 1.99
BXD2 m 0.2899 0.01078   4 0.0053895 0.0372 0.2785, 0.3045 -0.1
BXD27 m 0.2648 0.01262   5 0.00564269 0.0476 0.251, 0.279 -0.9
BXD32 m 0.29808 0.01769   5 0.00790989 0.0593 0.27, 0.317 0.17
BXD34 m 0.28117 0.01846   4 0.00922771 0.0656 0.2662, 0.3048 -0.38
BXD39 m 0.33702 0.01942   5 0.00868547 0.0576 0.3029, 0.3488 1.42
BXD40 m 0.26467 0.02495   3 0.0144 0.0943 0.246, 0.293 -0.91
BXD43 m 0.325 0.0457   3 0.02638 0.1406 0.2963, 0.3777 1.03
BXD44 m 0.23737 0.04166   9 0.01389 0.1755 0.1531, 0.3081 -1.78
BXD45 m 0.3049 0.03755   5 0.01679 0.1232 0.258, 0.361 0.38
BXD48 m 0.30512 0.00783913   5 0.00350577 0.0257 0.2968, 0.3158 0.39
BXD48a m 0.33045 0.02292   4 0.01146 0.0694 0.3146, 0.3645 1.2
BXD49 m 0.36323 0.02746   4 0.01373 0.0756 0.3288, 0.3935 2.26
BXD50 m 0.27658 0.03416   4 0.01708 0.1235 0.2388, 0.32 -0.53
BXD51 m 0.36467 0.06824   3 0.0394 0.1871 0.307, 0.44 2.3
BXD53 m 0.332 0.02797   5 0.01251 0.0843 0.289, 0.364 1.25
BXD55 m 0.28306 0.01579   5 0.00706142 0.0558 0.2593, 0.3024 -0.32
BXD56 m 0.2618 0.01259   3 0.00727072 0.0481 0.2473, 0.27 -1.0
BXD6 m 0.2984 0.01148   5 0.0051342 0.0385 0.285, 0.313 0.18
BXD60 m 0.2967 0.02731   4 0.01365 0.092 0.2675, 0.3272 0.12
BXD61 m 0.28727 0.02782   3 0.01606 0.0968 0.2572, 0.3121 -0.18
BXD62 m 0.2732 0.02135   4 0.01067 0.0781 0.2503, 0.297 -0.63
BXD63 m 0.27437 0.02103   3 0.01214 0.0766 0.2548, 0.2966 -0.6
BXD64 m 0.29745 0.02216   4 0.01108 0.0745 0.2664, 0.3184 0.15
BXD65 m 0.35403 0.03057   4 0.01529 0.0864 0.3238, 0.3898 1.96
BXD65a m 0.3174 0.01383   5 0.00618506 0.0436 0.3031, 0.338 0.79
BXD65b m 0.2995 0.02126   3 0.01227 0.071 0.2751, 0.314 0.21
BXD66 m 0.25724 0.04985   5 0.02229 0.1938 0.1818, 0.3172 -1.15
BXD67 m 0.2992 0.01424   5 0.0063671 0.0476 0.282, 0.313 0.2
BXD68 m 0.34013 0.01889   3 0.01091 0.0555 0.3224, 0.36 1.52
BXD69 m 0.30286 0.01997   5 0.00893038 0.0659 0.2778, 0.3271 0.32
BXD70 m 0.27037 0.0461   4 0.02305 0.1705 0.2115, 0.3242 -0.72
BXD71 m 0.30402 0.02062   4 0.01031 0.0678 0.284, 0.3329 0.36
BXD73 m 0.27503 0.02633   4 0.01317 0.0957 0.2588, 0.3141 -0.57
BXD73a m 0.29332 0.01   5 0.0044733 0.0341 0.2836, 0.3073 0.01
BXD73b m 0.28052 0.00719354   5 0.00321705 0.0256 0.2705, 0.2896 -0.4
BXD75 m 0.2976 0.0351   5 0.0157 0.1179 0.2505, 0.3275 0.15
BXD77 m 0.278 0.0192   5 0.00858487 0.0691 0.253, 0.3 -0.48
BXD79 m 0.29398 0.02216   5 0.00990916 0.0754 0.2643, 0.3152 0.03
BXD8 m 0.27425 0.00629153   4 0.00314576 0.0229 0.265, 0.279 -0.6
BXD81 m 0.26465 0.03632   4 0.01816 0.1372 0.2336, 0.305 -0.91
BXD83 m 0.24687 0.02051   3 0.01184 0.0831 0.2309, 0.27 -1.48
BXD84 m 0.28203 0.01974   3 0.0114 0.07 0.2609, 0.3 -0.35
BXD85 m 0.33428 0.02782   5 0.01244 0.0832 0.3084, 0.369 1.33
BXD87 m 0.25044 0.01601   5 0.00716035 0.0639 0.2292, 0.2713 -1.36
BXD89 m 0.27565 0.02228   4 0.01114 0.0808 0.2433, 0.2926 -0.56
BXD90 m 0.22073 0.01976   4 0.00987787 0.0895 0.1934, 0.2389 -2.32
BXD95 m 0.30328 0.04038   4 0.02019 0.1332 0.264, 0.3542 0.33
BXD98 m 0.29123 0.0112   4 0.00560244 0.0385 0.282, 0.3073 -0.05
BXD99 m 0.28584 0.02804   5 0.01254 0.0981 0.248, 0.314 -0.23
C57BL/6J m 0.3308 0.01595   5 0.00713162 0.0482 0.3151, 0.3565 1.22
DBA/2J m 0.27122 0.0161   4 0.00804999 0.0594 0.2521, 0.2915 -0.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 0.26058 0.0118354778 0.2839298584 0.2372301416
BXD100 m 0.3217333333 0.0152795361 0.351877871 0.2915887957
BXD101 m 0.2673333333 0.0152795361 0.297477871 0.2371887957
BXD11 m 0.267 0.0187135335 0.3039193679 0.2300806321
BXD12 m 0.28378 0.0118354778 0.3071298584 0.2604301416
BXD16 m 0.355 0.0132324664 0.3811059354 0.3288940646
BXD2 m 0.2899 0.0132324664 0.3160059354 0.2637940646
BXD27 m 0.2648 0.0118354778 0.2881498584 0.2414501416
BXD32 m 0.29808 0.0118354778 0.3214298584 0.2747301416
BXD34 m 0.281175 0.0132324664 0.3072809354 0.2550690646
BXD39 m 0.33702 0.0118354778 0.3603698584 0.3136701416
BXD40 m 0.2646666667 0.0152795361 0.2948112043 0.234522129
BXD43 m 0.325 0.0152795361 0.3551445376 0.2948554624
BXD44 m 0.2373666667 0.0088216443 0.2547706236 0.2199627098
BXD45 m 0.3049 0.0118354778 0.3282498584 0.2815501416
BXD48 m 0.30512 0.0118354778 0.3284698584 0.2817701416
BXD48a m 0.33045 0.0132324664 0.3565559354 0.3043440646
BXD49 m 0.363225 0.0132324664 0.3893309354 0.3371190646
BXD50 m 0.276575 0.0132324664 0.3026809354 0.2504690646
BXD51 m 0.3646666667 0.0152795361 0.3948112043 0.334522129
BXD53 m 0.332 0.0118354778 0.3553498584 0.3086501416
BXD55 m 0.28306 0.0118354778 0.3064098584 0.2597101416
BXD56 m 0.2618 0.0152795361 0.2919445376 0.2316554624
BXD6 m 0.2984 0.0118354778 0.3217498584 0.2750501416
BXD60 m 0.2967 0.0132324664 0.3228059354 0.2705940646
BXD61 m 0.2872666667 0.0152795361 0.3174112043 0.257122129
BXD62 m 0.2732 0.0132324664 0.2993059354 0.2470940646
BXD63 m 0.2743666667 0.0152795361 0.3045112043 0.244222129
BXD64 m 0.29745 0.0132324664 0.3235559354 0.2713440646
BXD65 m 0.354025 0.0132324664 0.3801309354 0.3279190646
BXD65a m 0.3174 0.0118354778 0.3407498584 0.2940501416
BXD65b m 0.2995 0.0152795361 0.3296445376 0.2693554624
BXD66 m 0.25724 0.0118354778 0.2805898584 0.2338901416
BXD67 m 0.2992 0.0118354778 0.3225498584 0.2758501416
BXD68 m 0.3401333333 0.0152795361 0.370277871 0.3099887957
BXD69 m 0.30286 0.0118354778 0.3262098584 0.2795101416
BXD70 m 0.270375 0.0132324664 0.2964809354 0.2442690646
BXD71 m 0.304025 0.0132324664 0.3301309354 0.2779190646
BXD73 m 0.275025 0.0132324664 0.3011309354 0.2489190646
BXD73a m 0.29332 0.0118354778 0.3166698584 0.2699701416
BXD73b m 0.28052 0.0118354778 0.3038698584 0.2571701416
BXD75 m 0.2976 0.0118354778 0.3209498584 0.2742501416
BXD77 m 0.278 0.0118354778 0.3013498584 0.2546501416
BXD79 m 0.29398 0.0118354778 0.3173298584 0.2706301416
BXD8 m 0.27425 0.0132324664 0.3003559354 0.2481440646
BXD81 m 0.26465 0.0132324664 0.2907559354 0.2385440646
BXD83 m 0.2468666667 0.0152795361 0.2770112043 0.216722129
BXD84 m 0.2820333333 0.0152795361 0.312177871 0.2518887957
BXD85 m 0.33428 0.0118354778 0.3576298584 0.3109301416
BXD87 m 0.25044 0.0118354778 0.2737898584 0.2270901416
BXD89 m 0.27565 0.0132324664 0.3017559354 0.2495440646
BXD90 m 0.220725 0.0132324664 0.2468309354 0.1946190646
BXD95 m 0.303275 0.0132324664 0.3293809354 0.2771690646
BXD98 m 0.291225 0.0132324664 0.3173309354 0.2651190646
BXD99 m 0.28584 0.0118354778 0.3091898584 0.2624901416
C57BL/6J m 0.3308 0.0118354778 0.3541498584 0.3074501416
DBA/2J m 0.271225 0.0132324664 0.2973309354 0.2451190646




  GWAS USING LINEAR MIXED MODELS