Project measure / variable:   Auwerx1   mcp1_HFD

ID, description, units MPD:111385   mcp1_HFD   blood monocyte chemoattractant protein 1 (MCP1) amount   [pg/mL]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   32 strains     sex: m     age: 29wks
Procedure cell signaling molecule detection
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - blood monocyte chemoattractant protein 1 (MCP1) amount HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested32 strains
Mean of the strain means78.94   pg/mL
Median of the strain means66.39   pg/mL
SD of the strain means± 41.86
Coefficient of variation (CV)0.5303
Min–max range of strain means33.786   –   245.0   pg/mL
Mean sample size per strain3.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 31 244111.5641 7874.5666 7.7005 < 0.0001
Residuals 91 93056.6951 1022.601


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD100 m 59.58 17.252   4 8.6262 0.2895 34.93, 74.21 -0.46
BXD43 m 50.58 29.274   3 16.901 0.5788 31.59, 84.29 -0.68
BXD44 m 48.04 28.001   2   19.8 0.5829 28.24, 67.84 -0.74
BXD45 m 53.06 20.246   4 10.123 0.3816 35.85, 75.01 -0.62
BXD48 m 59.27 15.948   5 7.1322 0.2691 34.93, 77.37 -0.47
BXD48a m 125.0 28.284   2   20.0 0.2263 105.0, 145.0 1.1
BXD51 m 61.79 12.131   4 6.0655 0.1963 45.93, 75.01 -0.41
BXD55 m 74.8 15.323   4 7.6617 0.2049 55.83, 93.36 -0.1
BXD56 m 55.72 13.859   2   9.8 0.2487 45.92, 65.52 -0.55
BXD61 m 245.0 95.93   5 42.902 0.3915 80.51, 331.3 3.97
BXD62 m 59.39 22.972   4 11.486 0.3868 41.6, 92.88 -0.47
BXD65 m 80.36 14.468   4 7.2342 0.18 67.83, 92.89 0.03
BXD66 m 35.112 16.076   4 8.0378 0.4578 22.0, 54.84 -1.05
BXD68 m 44.898 15.962   4 7.9812 0.3555 22.0, 55.83 -0.81
BXD69 m 109.4 40.04   4 20.02 0.366 75.01, 167.0 0.73
BXD70 m 49.17 11.535   3 6.66 0.2346 35.85, 55.83 -0.71
BXD71 m 55.56 19.581   3 11.305 0.3524 35.85, 75.01 -0.56
BXD73 m 82.87 17.021   4 8.5107 0.2054 60.7, 102.2 0.09
BXD73a m 141.3 56.92   5 25.454 0.4028 64.61, 211.8 1.49
BXD73b m 113.2 15.309   5 6.8464 0.1352 93.36, 131.8 0.82
BXD75 m 33.786 8.491   5 3.7973 0.2513 25.65, 45.93 -1.08
BXD81 m 50.89 4.95   3 2.8579 0.0973 45.93, 55.83 -0.67
BXD83 m 43.813 3.8336   3 2.2133 0.0875 41.6, 48.24 -0.84
BXD84 m 84.08 16.073   3 9.28 0.1912 65.52, 93.36 0.12
BXD85 m 93.43 60.01   3 34.645 0.6422 35.85, 155.6 0.35
BXD87 m 81.22 10.322   4 5.161 0.1271 71.03, 92.89 0.05
BXD89 m 105.6 32.774   4 16.387 0.3105 75.01, 151.7 0.64
BXD90 m 71.0 5.8241   4 2.9121 0.082 64.61, 77.37 -0.19
BXD98 m 84.9 17.545   5 7.8462 0.2066 55.84, 102.2 0.14
BXD99 m 48.916 39.248   5 17.552 0.8024 5.58, 102.2 -0.72
C57BL/6J m 139.2 17.132   5 7.6617 0.123 116.8, 161.2 1.44
DBA/2J m 84.99 35.662   4 17.831 0.4196 54.84, 136.7 0.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 m 59.585 15.9890669324 91.345317275 27.824682725
BXD43 m 50.5766666667 18.462584195 87.2503221232 13.9030112101
BXD44 m 48.04 22.6119553055 92.9558714356 3.1241285644
BXD45 m 53.06 15.9890669324 84.820317275 21.299682725
BXD48 m 59.268 14.3010562231 87.6752913656 30.8607086344
BXD48a m 125.0 22.6119553055 169.9158714356 80.0841285644
BXD51 m 61.7925 15.9890669324 93.552817275 30.032182725
BXD55 m 74.8025 15.9890669324 106.562817275 43.042182725
BXD56 m 55.72 22.6119553055 100.6358714356 10.8041285644
BXD61 m 245.022 14.3010562231 273.4292913656 216.6147086344
BXD62 m 59.39 15.9890669324 91.150317275 27.629682725
BXD65 m 80.36 15.9890669324 112.120317275 48.599682725
BXD66 m 35.1125 15.9890669324 66.872817275 3.352182725
BXD68 m 44.8975 15.9890669324 76.657817275 13.137182725
BXD69 m 109.3925 15.9890669324 141.152817275 77.632182725
BXD70 m 49.17 18.462584195 85.8436554565 12.4963445435
BXD71 m 55.5633333333 18.462584195 92.2369887899 18.8896778768
BXD73 m 82.87 15.9890669324 114.630317275 51.109682725
BXD73a m 141.302 14.3010562231 169.7092913656 112.8947086344
BXD73b m 113.232 14.3010562231 141.6392913656 84.8247086344
BXD75 m 33.786 14.3010562231 62.1932913656 5.3787086344
BXD81 m 50.8866666667 18.462584195 87.5603221232 14.2130112101
BXD83 m 43.8133333333 18.462584195 80.4869887899 7.1396778768
BXD84 m 84.08 18.462584195 120.7536554565 47.4063445435
BXD85 m 93.4333333333 18.462584195 130.1069887899 56.7596778768
BXD87 m 81.2175 15.9890669324 112.977817275 49.457182725
BXD89 m 105.5675 15.9890669324 137.327817275 73.807182725
BXD90 m 71.005 15.9890669324 102.765317275 39.244682725
BXD98 m 84.904 14.3010562231 113.3112913656 56.4967086344
BXD99 m 48.916 14.3010562231 77.3232913656 20.5087086344
C57BL/6J m 139.24 14.3010562231 167.6472913656 110.8327086344
DBA/2J m 84.99 15.9890669324 116.750317275 53.229682725




  GWAS USING LINEAR MIXED MODELS