Project measure / variable:   Auwerx1   il_6_HFD

ID, description, units MPD:111379   il_6_HFD   blood interleukin-6 (IL-6) amount   [pg/mL]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   33 strains     sex: m     age: 29wks
Procedure cell signaling molecule detection
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - blood interleukin-6 (IL-6) amount HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested33 strains
Mean of the strain means5.1207   pg/mL
Median of the strain means4.44   pg/mL
SD of the strain means± 2.4323
Coefficient of variation (CV)0.475
Min–max range of strain means2.8   –   13.512   pg/mL
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 32 805.7213 25.1788 1.041 0.4255
Residuals 97 2346.044 24.186


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD100 m 3.38 0.84947   4 0.42474 0.2513 2.8, 4.6 -0.72
BXD43 m 2.9733 0.30022   3 0.17333 0.101 2.8, 3.32 -0.88
BXD44 m 2.8 0.0   2   0.0 0.0 2.8, 2.8 -0.95
BXD45 m 2.8 0.0   5 0.0 0.0 2.8, 2.8 -0.95
BXD48 m 4.456 0.83119   5 0.37172 0.1865 3.56, 5.68 -0.27
BXD48a m 6.16 0.11314   2   0.08 0.0184 6.08, 6.24 0.43
BXD51 m 3.59 0.93659   4 0.46829 0.2609 2.8, 4.64 -0.63
BXD55 m 3.15 0.31896   4 0.15948 0.1013 2.8, 3.56 -0.81
BXD56 m 2.8 0.0   2   0.0 0.0 2.8, 2.8 -0.95
BXD61 m 13.512 16.594   5 7.4212 1.2281 5.12, 43.16 3.45
BXD62 m 4.97 1.7461   4 0.87306 0.3513 2.8, 6.52 -0.06
BXD64 m 3.98 1.4102   4 0.70512 0.3543 2.8, 5.68 -0.47
BXD65 m 8.65 2.8535   4 1.4267 0.3299 6.52, 12.8 1.45
BXD66 m 4.99 3.5275   4 1.7637 0.7069 2.8, 10.24 -0.05
BXD68 m 6.63 6.0354   4 3.0177 0.9103 2.8, 15.64 0.62
BXD69 m 4.592 2.5193   5 1.1267 0.5486 2.8, 9.04 -0.22
BXD70 m 5.28 2.521   3 1.4555 0.4775 2.8, 7.84 0.07
BXD71 m 2.8 4.2146848510894035e-08   3 2.433349433325905e-08 0.0 2.8, 2.8 -0.95
BXD73 m 3.32 0.6425   4 0.32125 0.1935 2.8, 4.12 -0.74
BXD73a m 5.928 0.86921   5 0.38872 0.1466 5.12, 7.2 0.33
BXD73b m 4.248 1.2997   5 0.58123 0.3059 2.8, 6.36 -0.36
BXD75 m 6.464 8.193   5 3.664 1.2675 2.8, 21.12 0.55
BXD81 m 3.4533 0.56898   3 0.3285 0.1648 2.8, 3.84 -0.69
BXD83 m 4.22 1.7842   4 0.89211 0.4228 2.8, 6.8 -0.37
BXD84 m 5.12 2.95   3 1.7032 0.5762 2.8, 8.44 0.0
BXD85 m 4.04 1.202   3 0.69397 0.2975 2.8, 5.2 -0.44
BXD87 m 4.44 1.2535   4 0.62674 0.2823 3.08, 5.96 -0.28
BXD89 m 8.81 11.337   4 5.6686 1.2869 2.8, 25.8 1.52
BXD90 m 10.39 9.4441   4 4.722 0.909 4.32, 24.48 2.17
BXD98 m 4.368 1.2417   5 0.55532 0.2843 2.8, 6.2 -0.31
BXD99 m 2.8 0.0   5 0.0 0.0 2.8, 2.8 -0.95
C57BL/6J m 6.92 1.4894   5 0.66609 0.2152 5.0, 9.08 0.74
DBA/2J m 6.95 3.1255   4 1.5628 0.4497 4.32, 11.44 0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 m 3.38 2.4589642303 8.2603633215 -1.5003633215
BXD43 m 2.9733333333 2.8393673206 8.6086914881 -2.6620248214
BXD44 m 2.8 3.4775005639 9.7018759985 -4.1018759985
BXD45 m 2.8 2.1993644693 7.1651296567 -1.5651296567
BXD48 m 4.456 2.1993644693 8.8211296567 0.0908703433
BXD48a m 6.16 3.4775005639 13.0618759985 -0.7418759985
BXD51 m 3.59 2.4589642303 8.4703633215 -1.2903633215
BXD55 m 3.15 2.4589642303 8.0303633215 -1.7303633215
BXD56 m 2.8 3.4775005639 9.7018759985 -4.1018759985
BXD61 m 13.512 2.1993644693 17.8771296567 9.1468703433
BXD62 m 4.97 2.4589642303 9.8503633215 0.0896366785
BXD64 m 3.98 2.4589642303 8.8603633215 -0.9003633215
BXD65 m 8.65 2.4589642303 13.5303633215 3.7696366785
BXD66 m 4.99 2.4589642303 9.8703633215 0.1096366785
BXD68 m 6.63 2.4589642303 11.5103633215 1.7496366785
BXD69 m 4.592 2.1993644693 8.9571296567 0.2268703433
BXD70 m 5.28 2.8393673206 10.9153581548 -0.3553581548
BXD71 m 2.8 2.8393673206 8.4353581548 -2.8353581548
BXD73 m 3.32 2.4589642303 8.2003633215 -1.5603633215
BXD73a m 5.928 2.1993644693 10.2931296567 1.5628703433
BXD73b m 4.248 2.1993644693 8.6131296567 -0.1171296567
BXD75 m 6.464 2.1993644693 10.8291296567 2.0988703433
BXD81 m 3.4533333333 2.8393673206 9.0886914881 -2.1820248214
BXD83 m 4.22 2.4589642303 9.1003633215 -0.6603633215
BXD84 m 5.12 2.8393673206 10.7553581548 -0.5153581548
BXD85 m 4.04 2.8393673206 9.6753581548 -1.5953581548
BXD87 m 4.44 2.4589642303 9.3203633215 -0.4403633215
BXD89 m 8.81 2.4589642303 13.6903633215 3.9296366785
BXD90 m 10.39 2.4589642303 15.2703633215 5.5096366785
BXD98 m 4.368 2.1993644693 8.7331296567 0.0028703433
BXD99 m 2.8 2.1993644693 7.1651296567 -1.5651296567
C57BL/6J m 6.92 2.1993644693 11.2851296567 2.5548703433
DBA/2J m 6.95 2.4589642303 11.8303633215 2.0696366785




  GWAS USING LINEAR MIXED MODELS