Project measure / variable:   Auwerx1   protein_CD

ID, description, units MPD:111368   protein_CD   total blood protein amount   [g/L]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   54 strains     sex: m     age: 29wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Auwerx1 - total blood protein amount CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested54 strains
Mean of the strain means52.77   g/L
Median of the strain means52.41   g/L
SD of the strain means± 3.6127
Coefficient of variation (CV)0.0685
Min–max range of strain means45.25   –   60.13   g/L
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 53 2989.72 56.4098 6.0774 < 0.0001
Residuals 172 1596.4839 9.2819


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 54.22 1.0849   5 0.48518 0.02 53.1, 55.5 0.4
BXD100 m 53.8 5.0229   3 2.9 0.0934 50.9, 59.6 0.29
BXD101 m 48.925 1.15   4 0.575 0.0235 47.3, 50.0 -1.06
BXD12 m 59.18 1.2834   5 0.57393 0.0217 57.5, 60.8 1.78
BXD16 m 56.25 1.5   4 0.75 0.0267 55.0, 58.0 0.96
BXD27 m 56.08 2.2219   5 0.99368 0.0396 53.5, 59.6 0.92
BXD32 m 49.5 3.1161   5 1.3936 0.063 45.4, 52.6 -0.9
BXD34 m 51.48 3.4596   4 1.7298 0.0672 48.2, 56.2 -0.36
BXD39 m 51.82 2.2354   5 0.9997 0.0431 50.1, 54.6 -0.26
BXD40 m 49.167 1.5948   3 0.92075 0.0324 47.4, 50.5 -1.0
BXD43 m 47.767 3.1342   3 1.8095 0.0656 44.4, 50.6 -1.38
BXD44 m 54.11 2.0667   7 0.78116 0.0382 51.5, 56.9 0.37
BXD45 m 53.06 3.8682   5 1.7299 0.0729 49.1, 59.0 0.08
BXD48 m 51.14 1.2641   5 0.56533 0.0247 49.2, 52.6 -0.45
BXD48a m 56.82 2.7833   5 1.2447 0.049 53.3, 60.3 1.12
BXD49 m 51.23 4.6053   4 2.3027 0.0899 45.9, 57.1 -0.43
BXD50 m 52.0 2.5781   4 1.2891 0.0496 49.3, 54.8 -0.21
BXD51 m 52.43 2.967   3 1.713 0.0566 49.3, 55.2 -0.09
BXD53 m 55.57 2.4784   4 1.2392 0.0446 53.3, 58.4 0.78
BXD55 m 56.04 4.5258   5 2.024 0.0808 50.8, 61.1 0.91
BXD56 m 50.2 1.7   3 0.9815 0.0339 48.5, 51.9 -0.71
BXD6 m 48.75 2.1947   4 1.0973 0.045 45.7, 50.4 -1.11
BXD60 m 55.67 2.6437   4 1.3219 0.0475 53.6, 59.5 0.8
BXD61 m 52.77 0.40415   3 0.23333 0.0077 52.4, 53.2 0.0
BXD62 m 54.77 1.9772   4 0.98858 0.0361 53.0, 57.6 0.55
BXD63 m 54.67 1.5948   3 0.92075 0.0292 52.9, 56.0 0.53
BXD64 m 48.525 2.6949   4 1.3475 0.0555 46.6, 52.5 -1.17
BXD65 m 51.95 2.5852   4 1.2926 0.0498 49.5, 55.6 -0.23
BXD65a m 54.94 1.417   5 0.63372 0.0258 52.9, 56.9 0.6
BXD65b m 52.23 3.3994   4 1.6997 0.0651 48.6, 56.1 -0.15
BXD66 m 59.4 2.8205   5 1.2613 0.0475 55.4, 62.3 1.84
BXD67 m 51.98 2.5091   4 1.2546 0.0483 48.7, 54.8 -0.22
BXD68 m 51.67 2.1779   3 1.2574 0.0422 49.9, 54.1 -0.3
BXD69 m 47.24 1.7242   5 0.7711 0.0365 45.3, 49.2 -1.53
BXD70 m 58.7 1.3216   4 0.66081 0.0225 56.8, 59.6 1.64
BXD71 m 57.12 1.4361   4 0.71807 0.0251 55.9, 59.2 1.2
BXD73 m 50.42 4.6024   4 2.3012 0.0913 45.5, 56.0 -0.65
BXD73a m 48.46 1.7573   5 0.78588 0.0363 46.2, 50.6 -1.19
BXD73b m 50.02 2.1441   5 0.95885 0.0429 46.8, 52.1 -0.76
BXD75 m 58.22 5.3877   5 2.4094 0.0925 53.1, 66.4 1.51
BXD77 m 51.28 3.2684   4 1.6342 0.0637 47.7, 54.9 -0.41
BXD79 m 45.25 1.2261   4 0.61305 0.0271 43.8, 46.8 -2.08
BXD81 m 45.625 2.0056   4 1.0028 0.044 44.2, 48.5 -1.98
BXD83 m 51.47 1.3279   3 0.76667 0.0258 50.7, 53.0 -0.36
BXD84 m 52.67 4.3016   3 2.4835 0.0817 49.7, 57.6 -0.03
BXD85 m 53.48 4.8163   5 2.1539 0.0901 47.1, 59.3 0.2
BXD87 m 45.52 6.9525   5 3.1092 0.1527 35.1, 52.8 -2.01
BXD89 m 50.47 3.6537   4 1.8268 0.0724 45.3, 53.8 -0.64
BXD90 m 54.8 3.4651   4 1.7325 0.0632 51.9, 59.8 0.56
BXD95 m 55.05 4.3623   4 2.1812 0.0792 48.8, 58.5 0.63
BXD98 m 56.4 3.3151   3 1.914 0.0588 52.7, 59.1 1.01
BXD99 m 52.38 2.9278   5 1.3094 0.0559 47.9, 55.1 -0.11
C57BL/6J m 60.13 2.9579   4 1.4789 0.0492 57.5, 63.7 2.04
DBA/2J m 56.62 3.2989   4 1.6494 0.0583 52.6, 60.3 1.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 54.22 1.3624891315 56.9093521281 51.5306478719
BXD100 m 53.8 1.7589659052 57.2719386681 50.3280613319
BXD101 m 48.925 1.5233091583 51.931787087 45.918212913
BXD12 m 59.18 1.3624891315 61.8693521281 56.4906478719
BXD16 m 56.25 1.5233091583 59.2567870869 53.243212913
BXD27 m 56.08 1.3624891315 58.7693521281 53.3906478719
BXD32 m 49.5 1.3624891315 52.1893521281 46.8106478719
BXD34 m 51.475 1.5233091583 54.481787087 48.468212913
BXD39 m 51.82 1.3624891315 54.5093521281 49.1306478719
BXD40 m 49.1666666667 1.7589659052 52.6386053348 45.6947279986
BXD43 m 47.7666666667 1.7589659052 51.2386053348 44.2947279986
BXD44 m 54.1142857143 1.1515134865 56.3872031078 51.8413683207
BXD45 m 53.06 1.3624891315 55.7493521281 50.3706478719
BXD48 m 51.14 1.3624891315 53.8293521281 48.4506478719
BXD48a m 56.82 1.3624891315 59.5093521281 54.1306478719
BXD49 m 51.225 1.5233091583 54.231787087 48.218212913
BXD50 m 52.0 1.5233091583 55.006787087 48.993212913
BXD51 m 52.4333333333 1.7589659052 55.9052720014 48.9613946652
BXD53 m 55.575 1.5233091583 58.581787087 52.568212913
BXD55 m 56.04 1.3624891315 58.7293521281 53.3506478719
BXD56 m 50.2 1.7589659052 53.6719386681 46.7280613319
BXD6 m 48.75 1.5233091583 51.756787087 45.743212913
BXD60 m 55.675 1.5233091583 58.681787087 52.668212913
BXD61 m 52.7666666667 1.7589659052 56.2386053348 49.2947279986
BXD62 m 54.775 1.5233091583 57.781787087 51.768212913
BXD63 m 54.6666666667 1.7589659052 58.1386053348 51.1947279986
BXD64 m 48.525 1.5233091583 51.531787087 45.518212913
BXD65 m 51.95 1.5233091583 54.956787087 48.943212913
BXD65a m 54.94 1.3624891315 57.6293521281 52.2506478719
BXD65b m 52.225 1.5233091583 55.231787087 49.218212913
BXD66 m 59.4 1.3624891315 62.0893521281 56.7106478719
BXD67 m 51.975 1.5233091583 54.981787087 48.968212913
BXD68 m 51.6666666667 1.7589659052 55.1386053348 48.1947279986
BXD69 m 47.24 1.3624891315 49.9293521281 44.5506478719
BXD70 m 58.7 1.5233091583 61.706787087 55.693212913
BXD71 m 57.125 1.5233091583 60.131787087 54.118212913
BXD73 m 50.425 1.5233091583 53.431787087 47.418212913
BXD73a m 48.46 1.3624891315 51.1493521281 45.7706478719
BXD73b m 50.02 1.3624891315 52.7093521281 47.3306478719
BXD75 m 58.22 1.3624891315 60.9093521281 55.5306478719
BXD77 m 51.275 1.5233091583 54.281787087 48.268212913
BXD79 m 45.25 1.5233091583 48.256787087 42.243212913
BXD81 m 45.625 1.5233091583 48.631787087 42.618212913
BXD83 m 51.4666666667 1.7589659052 54.9386053348 47.9947279986
BXD84 m 52.6666666667 1.7589659052 56.1386053348 49.1947279986
BXD85 m 53.48 1.3624891315 56.1693521281 50.7906478719
BXD87 m 45.52 1.3624891315 48.2093521281 42.8306478719
BXD89 m 50.475 1.5233091583 53.481787087 47.468212913
BXD90 m 54.8 1.5233091583 57.806787087 51.793212913
BXD95 m 55.05 1.5233091583 58.056787087 52.043212913
BXD98 m 56.4 1.7589659052 59.8719386681 52.9280613319
BXD99 m 52.38 1.3624891315 55.0693521281 49.6906478719
C57BL/6J m 60.125 1.5233091583 63.131787087 57.118212913
DBA/2J m 56.625 1.5233091583 59.631787087 53.618212913




  GWAS USING LINEAR MIXED MODELS