Project measure / variable:   Auwerx1   amylase_HFD

ID, description, units MPD:111345   amylase_HFD   blood amylase amount   [U/L]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   52 strains     sex: m     age: 29wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Auwerx1 - blood amylase amount HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested52 strains
Mean of the strain means1097.0   U/L
Median of the strain means1092.0   U/L
SD of the strain means± 148.7
Coefficient of variation (CV)0.1355
Min–max range of strain means842.3   –   1488.0   U/L
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 51 4653262.4833 91240.4408 8.7538 < 0.0001
Residuals 168 1751062.3167 10422.99


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 1071.0 77.58   5 34.697 0.0725 1005.0, 1195.0 -0.17
BXD100 m 1100.0 120.9   5 54.06 0.1099 909.0, 1235.0 0.02
BXD101 m 919.8 151.9   4 75.93 0.1651 796.0, 1141.0 -1.19
BXD16 m 1202.0 116.3   5 52.03 0.0968 1060.0, 1306.0 0.71
BXD27 m 1212.0 101.9   4 50.96 0.0841 1096.0, 1303.0 0.77
BXD32 m 1046.0 70.24   3 40.55 0.0671 1002.0, 1127.0 -0.34
BXD34 m 980.4 104.2   5 46.606 0.1063 866.0, 1094.0 -0.78
BXD39 m 1240.0 105.3   5 47.085 0.0849 1147.0, 1405.0 0.96
BXD40 m 923.8 43.177   4 21.588 0.0467 898.0, 988.0 -1.16
BXD43 m 1155.0 22.869   3 13.204 0.0198 1129.0, 1172.0 0.39
BXD44 m 989.2 30.655   5 13.709 0.031 965.0, 1042.0 -0.72
BXD45 m 858.5 18.947   4 9.4736 0.0221 840.0, 879.0 -1.6
BXD48 m 945.0 63.38   5 28.343 0.0671 865.0, 1006.0 -1.02
BXD48a m 977.7 75.16   3 43.395 0.0769 891.0, 1025.0 -0.8
BXD49 m 1077.0 90.04   4 45.019 0.0836 967.0, 1169.0 -0.13
BXD50 m 973.8 67.61   5 30.238 0.0694 866.0, 1053.0 -0.83
BXD51 m 1049.0 37.977   4 18.988 0.0362 1012.0, 1102.0 -0.32
BXD53 m 995.8 93.03   5 41.605 0.0934 899.0, 1150.0 -0.68
BXD55 m 1173.0 46.356   4 23.178 0.0395 1110.0, 1219.0 0.51
BXD56 m 1181.0 151.3   2   107.0 0.1281 1074.0, 1288.0 0.57
BXD6 m 962.6 52.25   5 23.368 0.0543 893.0, 1015.0 -0.9
BXD60 m 1148.0 115.7   4 57.85 0.1008 1036.0, 1303.0 0.34
BXD61 m 1272.0 136.6   5 61.09 0.1074 1078.0, 1461.0 1.18
BXD62 m 896.5 116.7   4 58.37 0.1302 757.0, 1024.0 -1.35
BXD63 m 1122.0 205.8   2   145.5 0.1835 976.0, 1267.0 0.17
BXD64 m 1084.0 92.93   4 46.466 0.0858 957.0, 1170.0 -0.09
BXD65 m 981.0 58.64   4 29.32 0.0598 918.0, 1054.0 -0.78
BXD65a m 1136.0 168.9   4 84.43 0.1486 927.0, 1311.0 0.26
BXD66 m 1113.0 52.48   4 26.239 0.0472 1058.0, 1173.0 0.11
BXD67 m 1014.0 57.45   5 25.694 0.0567 953.0, 1098.0 -0.56
BXD68 m 1078.0 170.8   4 85.38 0.1584 822.0, 1169.0 -0.13
BXD69 m 1142.0 80.32   5 35.921 0.0703 1029.0, 1229.0 0.3
BXD70 m 1468.0 205.2   3 118.5 0.1398 1249.0, 1656.0 2.5
BXD71 m 1228.0 214.8   3 124.0 0.1749 981.0, 1371.0 0.88
BXD73 m 1168.0 73.51   4 36.755 0.0629 1092.0, 1264.0 0.48
BXD73a m 1234.0 122.3   5 54.71 0.0991 1086.0, 1401.0 0.92
BXD73b m 1326.0 155.3   5 69.43 0.117 1189.0, 1567.0 1.54
BXD75 m 1065.0 110.5   5 49.438 0.1038 952.0, 1221.0 -0.21
BXD77 m 1144.0 38.829   5 17.365 0.0339 1113.0, 1205.0 0.32
BXD79 m 863.4 63.48   5 28.391 0.0735 778.0, 942.0 -1.57
BXD81 m 842.3 107.7   3 62.19 0.1279 720.0, 923.0 -1.71
BXD83 m 1229.0 113.2   4 56.59 0.0921 1076.0, 1322.0 0.89
BXD84 m 928.3 63.88   3 36.88 0.0688 856.0, 977.0 -1.13
BXD85 m 1309.0 76.16   4 38.08 0.0582 1195.0, 1356.0 1.43
BXD87 m 1375.0 67.92   5 30.373 0.0494 1280.0, 1453.0 1.87
BXD89 m 1488.0 33.971   4 16.985 0.0228 1443.0, 1522.0 2.63
BXD90 m 1037.0 164.4   4 82.19 0.1585 807.0, 1193.0 -0.4
BXD95 m 1121.0 61.17   4 30.587 0.0546 1072.0, 1210.0 0.16
BXD98 m 951.6 43.793   5 19.585 0.046 921.0, 1029.0 -0.98
BXD99 m 925.4 67.9   5 30.365 0.0734 821.0, 1009.0 -1.15
C57BL/6J m 1169.0 96.72   5 43.254 0.0827 1092.0, 1337.0 0.49
DBA/2J m 1146.0 170.5   5 76.25 0.1488 918.0, 1372.0 0.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 1070.6 45.6573980427 1160.7361590821 980.4638409179
BXD100 m 1099.6 45.6573980427 1189.7361590821 1009.4638409179
BXD101 m 919.75 51.0465228496 1020.5252894691 818.9747105309
BXD16 m 1202.2 45.6573980427 1292.3361590821 1112.0638409179
BXD27 m 1212.0 51.0465228496 1312.7752894691 1111.2247105309
BXD32 m 1046.0 58.9434474169 1162.3652810053 929.6347189947
BXD34 m 980.4 45.6573980427 1070.5361590821 890.2638409179
BXD39 m 1240.0 45.6573980427 1330.1361590821 1149.8638409179
BXD40 m 923.75 51.0465228496 1024.5252894691 822.9747105309
BXD43 m 1155.0 58.9434474169 1271.3652810053 1038.6347189947
BXD44 m 989.2 45.6573980427 1079.3361590821 899.0638409179
BXD45 m 858.5 51.0465228496 959.2752894691 757.7247105309
BXD48 m 945.0 45.6573980427 1035.1361590821 854.8638409179
BXD48a m 977.6666666667 58.9434474169 1094.031947672 861.3013856613
BXD49 m 1076.75 51.0465228496 1177.5252894691 975.9747105309
BXD50 m 973.8 45.6573980427 1063.9361590821 883.6638409179
BXD51 m 1048.75 51.0465228496 1149.5252894691 947.9747105309
BXD53 m 995.8 45.6573980427 1085.9361590821 905.6638409179
BXD55 m 1173.25 51.0465228496 1274.0252894691 1072.4747105309
BXD56 m 1181.0 72.190684926 1323.5177811193 1038.4822188807
BXD6 m 962.6 45.6573980427 1052.7361590821 872.4638409179
BXD60 m 1148.0 51.0465228496 1248.7752894691 1047.2247105309
BXD61 m 1272.0 45.6573980427 1362.1361590821 1181.8638409179
BXD62 m 896.5 51.0465228496 997.2752894691 795.7247105309
BXD63 m 1121.5 72.190684926 1264.0177811193 978.9822188807
BXD64 m 1083.5 51.0465228496 1184.2752894691 982.7247105309
BXD65 m 981.0 51.0465228496 1081.7752894691 880.2247105309
BXD65a m 1136.0 51.0465228496 1236.7752894691 1035.2247105309
BXD66 m 1113.0 51.0465228496 1213.7752894691 1012.2247105309
BXD67 m 1014.0 45.6573980427 1104.1361590821 923.8638409179
BXD68 m 1078.0 51.0465228496 1178.7752894691 977.2247105309
BXD69 m 1142.2 45.6573980427 1232.3361590821 1052.0638409179
BXD70 m 1467.6666666667 58.9434474169 1584.031947672 1351.3013856613
BXD71 m 1228.0 58.9434474169 1344.3652810053 1111.6347189947
BXD73 m 1168.5 51.0465228496 1269.2752894691 1067.7247105309
BXD73a m 1234.4 45.6573980427 1324.5361590821 1144.2638409179
BXD73b m 1326.4 45.6573980427 1416.5361590821 1236.2638409179
BXD75 m 1065.4 45.6573980427 1155.5361590821 975.2638409179
BXD77 m 1144.2 45.6573980427 1234.3361590821 1054.0638409179
BXD79 m 863.4 45.6573980427 953.5361590821 773.2638409179
BXD81 m 842.3333333333 58.9434474169 958.6986143387 725.968052328
BXD83 m 1229.25 51.0465228496 1330.0252894691 1128.4747105309
BXD84 m 928.3333333333 58.9434474169 1044.6986143387 811.968052328
BXD85 m 1308.75 51.0465228496 1409.5252894691 1207.9747105309
BXD87 m 1375.0 45.6573980427 1465.1361590821 1284.8638409179
BXD89 m 1488.0 51.0465228496 1588.7752894691 1387.2247105309
BXD90 m 1037.25 51.0465228496 1138.0252894691 936.4747105309
BXD95 m 1121.25 51.0465228496 1222.0252894691 1020.4747105309
BXD98 m 951.6 45.6573980427 1041.7361590821 861.4638409179
BXD99 m 925.4 45.6573980427 1015.5361590821 835.2638409179
C57BL/6J m 1169.2 45.6573980427 1259.3361590821 1079.0638409179
DBA/2J m 1145.8 45.6573980427 1235.9361590821 1055.6638409179




  GWAS USING LINEAR MIXED MODELS