Project measure / variable:   Auwerx1   dist_treadmill2_HFD

ID, description, units MPD:111335   dist_treadmill2_HFD   distance traveled, second treadmill training   [m]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 25wks
Procedure treadmill endurance test
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  STRAIN COMPARISON PLOT
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Auwerx1 - distance traveled, second treadmill training HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means473.5   m
Median of the strain means419.8   m
SD of the strain means± 258.7
Coefficient of variation (CV)0.5464
Min–max range of strain means25.8   –   1238.0   m
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 16343844.7435 297160.8135 8.3475 < 0.0001
Residuals 189 6728168.9467 35598.7775


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 377.6 213.3   5 95.4 0.565 158.0, 612.0 -0.37
BXD100 m 687.0 326.3   5 145.9 0.4749 120.0, 929.0 0.83
BXD101 m 790.8 412.3   4 206.2 0.5214 495.0, 1380.0 1.23
BXD11 m 321.2 98.75   5 44.164 0.3075 190.0, 453.0 -0.59
BXD12 m 372.4 113.2   5 50.63 0.304 211.0, 510.0 -0.39
BXD16 m 298.4 36.936   5 16.518 0.1238 260.0, 352.0 -0.68
BXD2 m 318.8 59.1   5 26.43 0.1854 259.0, 390.0 -0.6
BXD27 m 496.8 263.8   4 131.9 0.5311 272.0, 783.0 0.09
BXD32 m 369.0 149.6   3 86.37 0.4054 205.0, 498.0 -0.4
BXD34 m 465.0 101.2   5 45.26 0.2176 288.0, 535.0 -0.03
BXD39 m 371.2 94.04   5 42.055 0.2533 264.0, 476.0 -0.4
BXD40 m 783.3 25.166   3 14.53 0.0321 760.0, 810.0 1.2
BXD43 m 1149.0 250.4   3 144.6 0.218 869.0, 1352.0 2.61
BXD44 m 145.7 65.99   9 21.996 0.453 84.0, 268.0 -1.27
BXD45 m 954.5 133.3   4 66.63 0.1396 782.0, 1106.0 1.86
BXD48 m 442.0 39.198   5 17.53 0.0887 415.0, 510.0 -0.12
BXD48a m 259.3 100.5   3 58.05 0.3877 176.0, 371.0 -0.83
BXD49 m 109.2 79.45   4 39.723 0.7272 42.0, 220.0 -1.41
BXD50 m 282.4 70.72   5 31.627 0.2504 207.0, 394.0 -0.74
BXD51 m 314.8 106.2   4 53.09 0.3374 221.0, 435.0 -0.61
BXD53 m 374.0 103.0   5 46.061 0.2754 252.0, 521.0 -0.38
BXD55 m 600.5 143.7   4 71.85 0.2393 524.0, 816.0 0.49
BXD56 m 461.0 183.8   2   130.0 0.3988 331.0, 591.0 -0.05
BXD6 m 409.8 75.36   5 33.702 0.1839 300.0, 470.0 -0.25
BXD60 m 109.2 92.92   5 41.556 0.8509 10.0, 214.0 -1.41
BXD61 m 252.4 81.46   5 36.43 0.3227 158.0, 345.0 -0.85
BXD62 m 429.8 168.3   4 84.15 0.3916 222.0, 613.0 -0.17
BXD63 m 616.5 241.1   2   170.5 0.3911 446.0, 787.0 0.55
BXD64 m 336.0 158.4   4 79.22 0.4715 177.0, 553.0 -0.53
BXD65 m 160.8 18.839   4 9.4196 0.1172 144.0, 187.0 -1.21
BXD65a m 244.5 124.2   4 62.12 0.5081 115.0, 388.0 -0.89
BXD66 m 25.8 15.834   5 7.081 0.6137 8.0, 47.0 -1.73
BXD67 m 168.4 144.5   5 64.64 0.8584 20.0, 329.0 -1.18
BXD68 m 791.5 292.7   4 146.4 0.3699 478.0, 1144.0 1.23
BXD69 m 684.0 68.06   5 30.438 0.0995 588.0, 762.0 0.81
BXD70 m 700.5 268.7   4 134.4 0.3836 451.0, 1041.0 0.88
BXD71 m 264.7 67.83   3 39.159 0.2563 201.0, 336.0 -0.81
BXD73 m 519.8 245.8   4 122.9 0.473 279.8, 863.6 0.18
BXD73a m 340.2 63.56   4 31.781 0.1868 258.0, 413.0 -0.52
BXD73b m 325.6 156.2   5 69.85 0.4797 155.0, 518.0 -0.57
BXD75 m 588.4 233.1   5 104.3 0.3962 360.0, 928.0 0.44
BXD77 m 769.6 272.4   5 121.8 0.354 524.0, 1186.0 1.14
BXD79 m 162.4 81.62   5 36.502 0.5026 85.0, 276.0 -1.2
BXD8 m 556.2 182.1   5 81.46 0.3275 286.0, 750.0 0.32
BXD81 m 312.0 132.3   4 66.16 0.4241 127.0, 411.0 -0.62
BXD83 m 607.8 251.5   4 125.8 0.4138 340.0, 914.0 0.52
BXD84 m 678.0 486.8   3 281.0 0.718 278.0, 1220.0 0.79
BXD85 m 249.0 23.791   4 11.895 0.0955 227.0, 272.0 -0.87
BXD87 m 473.8 236.4   4 118.2 0.4991 173.0, 670.0 0.0
BXD89 m 703.0 105.3   4 52.65 0.1498 612.0, 820.0 0.89
BXD90 m 437.8 176.5   4 88.26 0.4033 245.0, 610.0 -0.14
BXD95 m 807.4 531.5   5 237.7 0.6583 216.0, 1323.0 1.29
BXD98 m 399.2 135.9   5 60.78 0.3404 239.0, 561.0 -0.29
BXD99 m 929.6 258.5   5 115.6 0.278 657.0, 1245.0 1.76
C57BL/6J m 478.8 138.8   4 69.38 0.2898 357.0, 627.0 0.02
DBA/2J m 1238.0 263.2   5 117.7 0.2127 803.0, 1443.0 2.96


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 377.6 84.3786436198 544.0448971855 211.1551028145
BXD100 m 687.0 84.3786436198 853.4448971855 520.5551028145
BXD101 m 790.75 94.3381914916 976.8410523074 604.6589476926
BXD11 m 321.2 84.3786436198 487.6448971855 154.7551028145
BXD12 m 372.4 84.3786436198 538.8448971855 205.9551028145
BXD16 m 298.4 84.3786436198 464.8448971855 131.9551028145
BXD2 m 318.8 84.3786436198 485.2448971855 152.3551028145
BXD27 m 496.75 94.3381914916 682.8410523074 310.6589476926
BXD32 m 369.0 108.932360505 583.8794382869 154.1205617131
BXD34 m 465.0 84.3786436198 631.4448971855 298.5551028145
BXD39 m 371.2 84.3786436198 537.6448971855 204.7551028145
BXD40 m 783.3333333333 108.932360505 998.2127716203 568.4538950464
BXD43 m 1148.6666666667 108.932360505 1363.5461049536 933.7872283797
BXD44 m 145.6666666667 62.892127661 269.7273682049 21.6059651284
BXD45 m 954.5 94.3381914916 1140.5910523074 768.4089476926
BXD48 m 442.0 84.3786436198 608.4448971855 275.5551028145
BXD48a m 259.3333333333 108.932360505 474.2127716203 44.4538950464
BXD49 m 109.25 94.3381914916 295.3410523074 -76.8410523074
BXD50 m 282.4 84.3786436198 448.8448971855 115.9551028145
BXD51 m 314.75 94.3381914916 500.8410523074 128.6589476926
BXD53 m 374.0 84.3786436198 540.4448971855 207.5551028145
BXD55 m 600.5 94.3381914916 786.5910523074 414.4089476926
BXD56 m 461.0 133.4143498571 724.1724900094 197.8275099906
BXD6 m 409.8 84.3786436198 576.2448971855 243.3551028145
BXD60 m 109.2 84.3786436198 275.6448971855 -57.2448971855
BXD61 m 252.4 84.3786436198 418.8448971855 85.9551028145
BXD62 m 429.75 94.3381914916 615.8410523074 243.6589476926
BXD63 m 616.5 133.4143498571 879.6724900094 353.3275099906
BXD64 m 336.0 94.3381914916 522.0910523074 149.9089476926
BXD65 m 160.75 94.3381914916 346.8410523074 -25.3410523074
BXD65a m 244.5 94.3381914916 430.5910523074 58.4089476926
BXD66 m 25.8 84.3786436198 192.2448971855 -140.6448971855
BXD67 m 168.4 84.3786436198 334.8448971855 1.9551028145
BXD68 m 791.5 94.3381914916 977.5910523074 605.4089476926
BXD69 m 684.0 84.3786436198 850.4448971855 517.5551028145
BXD70 m 700.5 94.3381914916 886.5910523074 514.4089476926
BXD71 m 264.6666666667 108.932360505 479.5461049536 49.7872283797
BXD73 m 519.75 94.3381914916 705.8410523074 333.6589476926
BXD73a m 340.25 94.3381914916 526.3410523074 154.1589476926
BXD73b m 325.6 84.3786436198 492.0448971855 159.1551028145
BXD75 m 588.4 84.3786436198 754.8448971855 421.9551028145
BXD77 m 769.6 84.3786436198 936.0448971855 603.1551028145
BXD79 m 162.4 84.3786436198 328.8448971855 -4.0448971855
BXD8 m 556.2 84.3786436198 722.6448971855 389.7551028145
BXD81 m 312.0 94.3381914916 498.0910523074 125.9089476926
BXD83 m 607.75 94.3381914916 793.8410523074 421.6589476926
BXD84 m 678.0 108.932360505 892.8794382869 463.1205617131
BXD85 m 249.0 94.3381914916 435.0910523074 62.9089476926
BXD87 m 473.75 94.3381914916 659.8410523074 287.6589476926
BXD89 m 703.0 94.3381914916 889.0910523074 516.9089476926
BXD90 m 437.75 94.3381914916 623.8410523074 251.6589476926
BXD95 m 807.4 84.3786436198 973.8448971855 640.9551028145
BXD98 m 399.2 84.3786436198 565.6448971855 232.7551028145
BXD99 m 929.6 84.3786436198 1096.0448971855 763.1551028145
C57BL/6J m 478.75 94.3381914916 664.8410523074 292.6589476926
DBA/2J m 1237.8 84.3786436198 1404.2448971855 1071.3551028145




  GWAS USING LINEAR MIXED MODELS