Project measure / variable:   Auwerx1   dist_treadmill2_CD

ID, description, units MPD:111334   dist_treadmill2_CD   distance traveled, second treadmill training   [m]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 25wks
Procedure treadmill endurance test
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  STRAIN COMPARISON PLOT
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Auwerx1 - distance traveled, second treadmill training CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means620.1   m
Median of the strain means573.6   m
SD of the strain means± 257.3
Coefficient of variation (CV)0.415
Min–max range of strain means150.8   –   1184.0   m
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 15208023.3857 271571.8462 8.958 < 0.0001
Residuals 185 5608512.3264 30316.2828


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 537.0 160.3   4 80.14 0.2985 448.0, 777.0 -0.32
BXD100 m 1017.0 278.9   3 161.1 0.2743 759.0, 1313.0 1.54
BXD101 m 989.5 456.5   4 228.3 0.4614 372.0, 1353.0 1.44
BXD11 m 637.5 111.0   2   78.5 0.1741 559.0, 716.0 0.07
BXD12 m 289.4 76.54   5 34.231 0.2645 217.0, 420.0 -1.29
BXD16 m 197.0 74.64   4 37.321 0.3789 111.0, 291.0 -1.64
BXD2 m 387.2 82.49   4 41.246 0.213 274.0, 449.0 -0.91
BXD27 m 427.8 95.94   4 47.969 0.2243 336.0, 550.0 -0.75
BXD32 m 835.2 330.5   5 147.8 0.3957 332.0, 1180.0 0.84
BXD34 m 497.2 236.7   4 118.4 0.4761 268.0, 704.0 -0.48
BXD39 m 421.4 101.7   5 45.484 0.2413 290.0, 546.0 -0.77
BXD40 m 939.7 119.0   3 68.7 0.1266 833.0, 1068.0 1.24
BXD43 m 1184.0 152.7   3 88.18 0.129 1008.0, 1275.0 2.19
BXD44 m 573.6 268.9   9 89.62 0.4688 274.0, 1012.0 -0.18
BXD45 m 864.2 95.64   4 47.821 0.1107 783.0, 995.0 0.95
BXD48 m 509.2 61.18   5 27.359 0.1201 429.0, 597.0 -0.43
BXD48a m 539.0 137.5   4 68.75 0.2551 363.3, 688.1 -0.32
BXD49 m 366.5 100.3   4 50.16 0.2737 237.0, 458.0 -0.99
BXD50 m 417.5 342.9   4 171.5 0.8214 215.0, 929.0 -0.79
BXD51 m 1000.0 123.2   4 61.58 0.1231 864.0, 1130.0 1.48
BXD53 m 519.0 149.4   5 66.79 0.2878 378.0, 711.0 -0.39
BXD55 m 815.2 237.0   5 106.0 0.2907 505.0, 1086.0 0.76
BXD56 m 454.3 223.2   3 128.9 0.4913 274.0, 704.0 -0.64
BXD6 m 518.6 51.43   5 22.999 0.0992 463.0, 601.0 -0.39
BXD60 m 330.2 191.6   5 85.7 0.5803 157.0, 632.0 -1.13
BXD61 m 915.3 87.55   3 50.54 0.0956 857.0, 1016.0 1.15
BXD62 m 613.8 111.8   4 55.9 0.1822 460.0, 712.0 -0.02
BXD63 m 761.2 145.2   4 72.59 0.1907 607.0, 928.0 0.55
BXD64 m 706.5 61.41   4 30.707 0.0869 648.0, 786.0 0.34
BXD65 m 352.2 133.3   4 66.64 0.3783 227.0, 540.0 -1.04
BXD65a m 449.6 139.3   5 62.31 0.3099 232.0, 584.0 -0.66
BXD65b m 407.2 158.7   4 79.37 0.3898 233.0, 615.0 -0.83
BXD66 m 150.8 48.168   5 21.542 0.3194 85.0, 221.0 -1.82
BXD67 m 295.0 80.71   5 36.096 0.2736 158.0, 355.0 -1.26
BXD68 m 707.3 169.1   3 97.63 0.2391 525.0, 859.0 0.34
BXD69 m 599.4 84.96   5 37.997 0.1417 524.0, 746.0 -0.08
BXD70 m 768.2 130.7   4 65.34 0.1701 670.0, 951.0 0.58
BXD71 m 446.6 114.5   5 51.21 0.2564 296.0, 598.0 -0.67
BXD73 m 600.6 198.1   4 99.06 0.3299 440.0, 883.9 -0.08
BXD73a m 404.2 226.8   4 113.4 0.5611 191.0, 683.0 -0.84
BXD73b m 414.4 171.9   5 76.89 0.4149 264.0, 704.0 -0.8
BXD75 m 563.6 88.91   5 39.763 0.1578 422.0, 642.0 -0.22
BXD77 m 598.8 174.4   5 77.99 0.2912 332.0, 789.0 -0.08
BXD79 m 322.2 143.7   5 64.26 0.446 204.0, 572.0 -1.16
BXD8 m 544.8 55.05   4 27.524 0.1011 478.0, 612.0 -0.29
BXD81 m 1086.0 329.8   4 164.9 0.3035 630.0, 1380.0 1.81
BXD83 m 816.3 143.1   3 82.62 0.1753 722.0, 981.0 0.76
BXD84 m 885.2 189.1   4 94.53 0.2136 654.0, 1077.0 1.03
BXD85 m 177.0 72.58   5 32.458 0.41 87.0, 286.0 -1.72
BXD87 m 582.0 116.5   4 58.26 0.2002 462.0, 740.0 -0.15
BXD89 m 709.2 133.4   4 66.7 0.1881 545.0, 865.0 0.35
BXD90 m 560.8 191.9   4 95.95 0.3422 382.0, 823.0 -0.23
BXD95 m 946.0 198.4   4 99.18 0.2097 765.0, 1224.0 1.27
BXD98 m 897.0 142.4   4 71.22 0.1588 752.0, 1088.0 1.08
BXD99 m 1159.0 116.3   5 52.03 0.1004 1013.0, 1279.0 2.09
C57BL/6J m 614.2 98.99   4 49.496 0.1612 539.0, 760.0 -0.02
DBA/2J m 1024.0 217.7   3 125.7 0.2125 874.0, 1274.0 1.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 537.0 87.0578584123 708.7538324431 365.2461675569
BXD100 m 1017.0 100.5257559788 1215.3242427908 818.6757572092
BXD101 m 989.5 87.0578584123 1161.2538324431 817.7461675569
BXD11 m 637.5 123.1184040778 880.3965992306 394.6034007694
BXD12 m 289.4 77.8669157542 443.0212978956 135.7787021044
BXD16 m 197.0 87.0578584123 368.7538324431 25.2461675569
BXD2 m 387.25 87.0578584123 559.0038324431 215.4961675569
BXD27 m 427.75 87.0578584123 599.5038324431 255.9961675569
BXD32 m 835.2 77.8669157542 988.8212978956 681.5787021044
BXD34 m 497.25 87.0578584123 669.0038324431 325.4961675569
BXD39 m 421.4 77.8669157542 575.0212978956 267.7787021044
BXD40 m 939.6666666667 100.5257559788 1137.9909094574 741.3424238759
BXD43 m 1184.3333333333 100.5257559788 1382.6575761241 986.0090905426
BXD44 m 573.5555555556 58.0385722749 688.0581105176 459.0530005935
BXD45 m 864.25 87.0578584123 1036.0038324431 692.4961675569
BXD48 m 509.2 77.8669157542 662.8212978956 355.5787021044
BXD48a m 539.0 87.0578584123 710.7538324431 367.2461675569
BXD49 m 366.5 87.0578584123 538.2538324431 194.7461675569
BXD50 m 417.5 87.0578584123 589.2538324431 245.7461675569
BXD51 m 1000.5 87.0578584123 1172.2538324431 828.7461675569
BXD53 m 519.0 77.8669157542 672.6212978956 365.3787021044
BXD55 m 815.2 77.8669157542 968.8212978956 661.5787021044
BXD56 m 454.3333333333 100.5257559788 652.6575761241 256.0090905426
BXD6 m 518.6 77.8669157542 672.2212978956 364.9787021044
BXD60 m 330.2 77.8669157542 483.8212978956 176.5787021044
BXD61 m 915.3333333333 100.5257559788 1113.6575761241 717.0090905426
BXD62 m 613.75 87.0578584123 785.5038324431 441.9961675569
BXD63 m 761.25 87.0578584123 933.0038324431 589.4961675569
BXD64 m 706.5 87.0578584123 878.2538324431 534.7461675569
BXD65 m 352.25 87.0578584123 524.0038324431 180.4961675569
BXD65a m 449.6 77.8669157542 603.2212978956 295.9787021044
BXD65b m 407.25 87.0578584123 579.0038324431 235.4961675569
BXD66 m 150.8 77.8669157542 304.4212978956 -2.8212978956
BXD67 m 295.0 77.8669157542 448.6212978956 141.3787021044
BXD68 m 707.3333333333 100.5257559788 905.6575761241 509.0090905426
BXD69 m 599.4 77.8669157542 753.0212978956 445.7787021044
BXD70 m 768.25 87.0578584123 940.0038324431 596.4961675569
BXD71 m 446.6 77.8669157542 600.2212978956 292.9787021044
BXD73 m 600.575 87.0578584123 772.3288324431 428.8211675569
BXD73a m 404.25 87.0578584123 576.0038324431 232.4961675569
BXD73b m 414.4 77.8669157542 568.0212978956 260.7787021044
BXD75 m 563.6 77.8669157542 717.2212978956 409.9787021044
BXD77 m 598.8 77.8669157542 752.4212978956 445.1787021044
BXD79 m 322.2 77.8669157542 475.8212978956 168.5787021044
BXD8 m 544.75 87.0578584123 716.5038324431 372.9961675569
BXD81 m 1086.5 87.0578584123 1258.2538324431 914.7461675569
BXD83 m 816.3333333333 100.5257559788 1014.6575761241 618.0090905426
BXD84 m 885.25 87.0578584123 1057.0038324431 713.4961675569
BXD85 m 177.0 77.8669157542 330.6212978956 23.3787021044
BXD87 m 582.0 87.0578584123 753.7538324431 410.2461675569
BXD89 m 709.25 87.0578584123 881.0038324431 537.4961675569
BXD90 m 560.75 87.0578584123 732.5038324431 388.9961675569
BXD95 m 946.0 87.0578584123 1117.7538324431 774.2461675569
BXD98 m 897.0 87.0578584123 1068.7538324431 725.2461675569
BXD99 m 1158.6 77.8669157542 1312.2212978956 1004.9787021044
C57BL/6J m 614.25 87.0578584123 786.0038324431 442.4961675569
DBA/2J m 1024.3333333333 100.5257559788 1222.6575761241 826.0090905426




  GWAS USING LINEAR MIXED MODELS