Project measure / variable:   Auwerx1   bw_treadmill2_HFD

ID, description, units MPD:111331   bw_treadmill2_HFD   body weight, prior to second treadmill training, at 25 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 25wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight, prior to second treadmill training, at 25 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means44.394   g
Median of the strain means43.419   g
SD of the strain means± 7.9854
Coefficient of variation (CV)0.1799
Min–max range of strain means27.072   –   61.42   g
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 16844.5959 306.2654 12.3739 < 0.0001
Residuals 195 4826.4103 24.7508


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 34.24 1.937   5 0.86626 0.0566 31.52, 36.47 -1.27
BXD100 m 49.046 8.3364   5 3.7282 0.17 37.58, 59.33 0.58
BXD101 m 46.782 4.9471   4 2.4735 0.1057 39.47, 49.82 0.3
BXD11 m 52.25 3.3051   5 1.4781 0.0633 46.76, 55.25 0.98
BXD12 m 31.332 2.4034   5 1.0748 0.0767 27.97, 33.94 -1.64
BXD16 m 59.08 4.3343   5 1.9383 0.0734 54.27, 63.38 1.84
BXD2 m 42.906 7.5701   5 3.3855 0.1764 31.02, 51.29 -0.19
BXD27 m 36.58 4.7836   4 2.3918 0.1308 29.82, 40.87 -0.98
BXD32 m 48.623 6.0913   3 3.5168 0.1253 43.63, 55.41 0.53
BXD34 m 37.204 4.1844   5 1.8713 0.1125 32.41, 42.15 -0.9
BXD39 m 46.254 1.0317   5 0.46137 0.0223 45.06, 47.49 0.23
BXD40 m 27.072 3.2977   4 1.6488 0.1218 24.15, 30.22 -2.17
BXD43 m 37.103 2.4453   3 1.4118 0.0659 34.57, 39.45 -0.91
BXD44 m 61.42 4.1054   9 1.3685 0.0668 55.56, 68.38 2.13
BXD45 m 39.486 6.5181   5 2.915 0.1651 34.23, 50.67 -0.61
BXD48 m 49.968 6.2863   5 2.8113 0.1258 44.79, 57.68 0.7
BXD48a m 56.4 5.425   3 3.1321 0.0962 51.89, 62.42 1.5
BXD49 m 51.52 10.48   5 4.6869 0.2034 38.1, 64.3 0.89
BXD50 m 42.39 2.1626   5 0.96714 0.051 39.85, 45.64 -0.25
BXD51 m 55.38 6.3457   4 3.1729 0.1146 46.31, 61.11 1.38
BXD53 m 42.948 3.535   5 1.5809 0.0823 38.62, 47.31 -0.18
BXD55 m 35.125 1.5675   4 0.78376 0.0446 33.6, 36.93 -1.16
BXD56 m 40.02 1.2445   2   0.88 0.0311 39.14, 40.9 -0.55
BXD6 m 45.322 4.0731   5 1.8216 0.0899 39.0, 50.11 0.12
BXD60 m 58.88 3.0173   5 1.3494 0.0512 53.76, 61.17 1.81
BXD61 m 53.21 2.169   5 0.97002 0.0408 50.93, 56.57 1.1
BXD62 m 42.77 1.6864   4 0.84319 0.0394 40.7, 44.38 -0.2
BXD63 m 41.18 1.5274   2   1.08 0.0371 40.1, 42.26 -0.4
BXD64 m 43.583 3.934   4 1.967 0.0903 39.84, 47.08 -0.1
BXD65 m 59.8 2.6911   4 1.3455 0.045 57.19, 63.57 1.93
BXD65a m 51.03 5.5177   4 2.7589 0.1081 45.6, 58.38 0.83
BXD66 m 56.88 6.9766   5 3.12 0.1227 44.4, 60.25 1.56
BXD67 m 47.924 4.5704   5 2.044 0.0954 42.34, 53.42 0.44
BXD68 m 34.942 3.0053   4 1.5026 0.086 31.65, 38.26 -1.18
BXD69 m 38.172 3.814   5 1.7057 0.0999 32.1, 42.51 -0.78
BXD70 m 36.733 4.5524   4 2.2762 0.1239 31.09, 42.23 -0.96
BXD71 m 51.1 4.7095   3 2.7191 0.0922 47.51, 56.43 0.84
BXD73 m 41.82 2.4102   4 1.2051 0.0576 39.05, 44.24 -0.32
BXD73a m 44.942 2.3705   5 1.0601 0.0527 42.48, 47.67 0.07
BXD73b m 46.886 1.6402   5 0.7335 0.035 45.08, 49.51 0.31
BXD75 m 38.896 4.3579   5 1.9489 0.112 34.36, 44.28 -0.69
BXD77 m 37.728 7.1471   5 3.1963 0.1894 30.12, 46.25 -0.83
BXD79 m 47.65 3.4713   5 1.5524 0.0729 42.02, 50.5 0.41
BXD8 m 31.806 4.2524   5 1.9017 0.1337 25.65, 36.14 -1.58
BXD81 m 45.04 2.7582   4 1.3791 0.0612 41.34, 47.64 0.08
BXD83 m 35.38 4.6914   4 2.3457 0.1326 28.75, 39.48 -1.13
BXD84 m 45.253 14.888   3 8.5957 0.329 33.94, 62.12 0.11
BXD85 m 53.54 2.8279   4 1.414 0.0528 50.68, 56.32 1.15
BXD87 m 34.304 2.9217   5 1.3066 0.0852 30.67, 38.34 -1.26
BXD89 m 38.545 2.8168   4 1.4084 0.0731 35.49, 42.27 -0.73
BXD90 m 43.255 8.5474   4 4.2737 0.1976 34.78, 53.96 -0.14
BXD95 m 45.97 8.9647   5 4.0091 0.195 36.32, 57.0 0.2
BXD98 m 50.49 2.5267   5 1.13 0.05 46.9, 53.05 0.76
BXD99 m 42.112 6.0984   5 2.7273 0.1448 36.42, 50.46 -0.29
C57BL/6J m 41.94 4.2256   5 1.8898 0.1008 37.09, 46.71 -0.31
DBA/2J m 35.866 3.6628   5 1.638 0.1021 32.45, 41.61 -1.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 34.24 2.2248964889 38.6279498691 29.8520501309
BXD100 m 49.046 2.2248964889 53.4339498691 44.6580501309
BXD101 m 46.7825 2.487509896 51.6883770945 41.8766229055
BXD11 m 52.252 2.2248964889 56.6399498691 47.8640501309
BXD12 m 31.332 2.2248964889 35.7199498691 26.9440501309
BXD16 m 59.084 2.2248964889 63.4719498691 54.6960501309
BXD2 m 42.906 2.2248964889 47.2939498691 38.5180501309
BXD27 m 36.58 2.487509896 41.4858770945 31.6741229055
BXD32 m 48.6233333333 2.8723290162 54.2881522556 42.958514411
BXD34 m 37.204 2.2248964889 41.5919498691 32.8160501309
BXD39 m 46.254 2.2248964889 50.6419498691 41.8660501309
BXD40 m 27.0725 2.487509896 31.9783770945 22.1666229055
BXD43 m 37.1033333333 2.8723290162 42.7681522556 31.438514411
BXD44 m 61.4233333333 1.6583399307 64.693918063 58.1527486036
BXD45 m 39.486 2.2248964889 43.8739498691 35.0980501309
BXD48 m 49.968 2.2248964889 54.3559498691 45.5800501309
BXD48a m 56.4 2.8723290162 62.0648189223 50.7351810777
BXD49 m 51.522 2.2248964889 55.9099498691 47.1340501309
BXD50 m 42.39 2.2248964889 46.7779498691 38.0020501309
BXD51 m 55.3775 2.487509896 60.2833770945 50.4716229055
BXD53 m 42.948 2.2248964889 47.3359498691 38.5600501309
BXD55 m 35.125 2.487509896 40.0308770945 30.2191229055
BXD56 m 40.02 3.5178702315 46.9579579224 33.0820420776
BXD6 m 45.322 2.2248964889 49.7099498691 40.9340501309
BXD60 m 58.882 2.2248964889 63.2699498691 54.4940501309
BXD61 m 53.21 2.2248964889 57.5979498691 48.8220501309
BXD62 m 42.77 2.487509896 47.6758770945 37.8641229055
BXD63 m 41.18 3.5178702315 48.1179579224 34.2420420776
BXD64 m 43.5825 2.487509896 48.4883770945 38.6766229055
BXD65 m 59.805 2.487509896 64.7108770945 54.8991229055
BXD65a m 51.03 2.487509896 55.9358770945 46.1241229055
BXD66 m 56.876 2.2248964889 61.2639498691 52.4880501309
BXD67 m 47.924 2.2248964889 52.3119498691 43.5360501309
BXD68 m 34.9425 2.487509896 39.8483770945 30.0366229055
BXD69 m 38.172 2.2248964889 42.5599498691 33.7840501309
BXD70 m 36.7325 2.487509896 41.6383770945 31.8266229055
BXD71 m 51.0966666667 2.8723290162 56.761485589 45.4318477444
BXD73 m 41.82 2.487509896 46.7258770945 36.9141229055
BXD73a m 44.942 2.2248964889 49.3299498691 40.5540501309
BXD73b m 46.886 2.2248964889 51.2739498691 42.4980501309
BXD75 m 38.896 2.2248964889 43.2839498691 34.5080501309
BXD77 m 37.728 2.2248964889 42.1159498691 33.3400501309
BXD79 m 47.65 2.2248964889 52.0379498691 43.2620501309
BXD8 m 31.806 2.2248964889 36.1939498691 27.4180501309
BXD81 m 45.04 2.487509896 49.9458770945 40.1341229055
BXD83 m 35.38 2.487509896 40.2858770945 30.4741229055
BXD84 m 45.2533333333 2.8723290162 50.9181522556 39.588514411
BXD85 m 53.54 2.487509896 58.4458770945 48.6341229055
BXD87 m 34.304 2.2248964889 38.6919498691 29.9160501309
BXD89 m 38.545 2.487509896 43.4508770945 33.6391229055
BXD90 m 43.255 2.487509896 48.1608770945 38.3491229055
BXD95 m 45.97 2.2248964889 50.3579498691 41.5820501309
BXD98 m 50.494 2.2248964889 54.8819498691 46.1060501309
BXD99 m 42.112 2.2248964889 46.4999498691 37.7240501309
C57BL/6J m 41.94 2.2248964889 46.3279498691 37.5520501309
DBA/2J m 35.866 2.2248964889 40.2539498691 31.4780501309




  GWAS USING LINEAR MIXED MODELS