Project measure / variable:   Auwerx1   speed_wheel_HFD

ID, description, units MPD:111323   speed_wheel_HFD   speed (mean rpm), voluntary wheel running test, 24h   [n/min]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   32 strains     sex: m     age: 23wks
Procedure running wheel monitoring
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  STRAIN COMPARISON PLOT
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Auwerx1 - speed (mean rpm), voluntary wheel running test, 24h HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested32 strains
Mean of the strain means47.27   n/min
Median of the strain means46.341   n/min
SD of the strain means± 9.4052
Coefficient of variation (CV)0.199
Min–max range of strain means17.87   –   68.72   n/min
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 31 12083.6594 389.7955 3.7808 < 0.0001
Residuals 103 10619.1809 103.0988


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD100 m 68.72 30.594   5 13.682 0.4452 43.96, 121.8 2.28
BXD43 m 57.15 7.177   3 4.1436 0.1256 51.61, 65.26 1.05
BXD44 m 35.348 6.4974   9 2.1658 0.1838 26.84, 48.74 -1.27
BXD45 m 51.18 7.5727   4 3.7863 0.148 45.41, 61.46 0.42
BXD48 m 44.954 6.804   5 3.0429 0.1514 34.47, 53.5 -0.25
BXD49 m 36.004 10.986   5 4.913 0.3051 19.13, 49.72 -1.2
BXD51 m 47.962 9.6472   4 4.8236 0.2011 37.6, 58.1 0.07
BXD55 m 55.8 5.7601   4 2.8801 0.1032 52.5, 64.42 0.91
BXD56 m 40.437 3.6408   3 2.102 0.09 36.84, 44.12 -0.73
BXD61 m 49.394 4.0853   5 1.827 0.0827 45.2, 55.72 0.23
BXD62 m 40.005 10.36   4 5.1799 0.259 26.1, 51.02 -0.77
BXD63 m 45.45 5.1619   2   3.65 0.1136 41.8, 49.1 -0.19
BXD64 m 46.18 7.8285   4 3.9142 0.1695 35.6, 54.2 -0.12
BXD65 m 39.49 3.4505   4 1.7252 0.0874 34.9, 43.03 -0.83
BXD66 m 17.87 2.9381   4 1.4691 0.1644 15.5, 22.05 -3.13
BXD68 m 53.71 11.294   4 5.6469 0.2103 37.3, 61.9 0.68
BXD69 m 42.596 8.4001   5 3.7566 0.1972 34.7, 53.6 -0.5
BXD70 m 49.045 4.9126   4 2.4563 0.1002 43.22, 54.93 0.19
BXD71 m 49.533 2.8184   3 1.6272 0.0569 47.3, 52.7 0.24
BXD73 m 54.02 13.839   3 7.9902 0.2562 45.94, 70.0 0.72
BXD73a m 62.93 7.4144   3 4.2807 0.1178 57.6, 71.4 1.67
BXD73b m 43.793 6.6268   4 3.3134 0.1513 36.4, 49.97 -0.37
BXD75 m 54.68 13.356   5 5.9729 0.2443 46.2, 78.2 0.79
BXD79 m 38.16 5.6998   5 2.549 0.1494 32.2, 46.6 -0.97
BXD81 m 45.905 19.282   4 9.641 0.42 19.7, 64.12 -0.15
BXD83 m 41.875 7.7077   4 3.8539 0.1841 33.4, 51.4 -0.57
BXD87 m 43.175 3.8767   4 1.9384 0.0898 39.4, 48.6 -0.44
BXD90 m 46.503 13.71   3 7.9155 0.2948 32.5, 59.9 -0.08
BXD98 m 43.94 3.1053   5 1.3887 0.0707 40.5, 47.5 -0.35
BXD99 m 56.16 7.8257   5 3.4998 0.1393 48.98, 67.3 0.95
C57BL/6J m 57.22 4.5138   4 2.2569 0.0789 50.55, 60.4 1.06
DBA/2J m 53.46 7.8702   5 3.5197 0.1472 47.2, 66.67 0.66


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 m 68.716 4.540899546 77.7218032547 59.7101967453
BXD43 m 57.1533333333 5.8622761062 68.7797753415 45.5268913252
BXD44 m 35.3477777778 3.384586688 42.0603072009 28.6352483546
BXD45 m 51.1775 5.076880032 61.2462941347 41.1087058653
BXD48 m 44.954 4.540899546 53.9598032547 35.9481967453
BXD49 m 36.004 4.540899546 45.0098032547 26.9981967453
BXD51 m 47.9625 5.076880032 58.0312941347 37.8937058653
BXD55 m 55.8 5.076880032 65.8687941347 45.7312058653
BXD56 m 40.4366666667 5.8622761062 52.0631086748 28.8102246585
BXD61 m 49.394 4.540899546 58.3998032547 40.3881967453
BXD62 m 40.005 5.076880032 50.0737941347 29.9362058653
BXD63 m 45.45 7.1797925957 59.689425222 31.2105747779
BXD64 m 46.18 5.076880032 56.2487941347 36.1112058653
BXD65 m 39.49 5.076880032 49.5587941347 29.4212058653
BXD66 m 17.87 5.076880032 27.9387941347 7.8012058653
BXD68 m 53.71 5.076880032 63.7787941347 43.6412058653
BXD69 m 42.596 4.540899546 51.6018032547 33.5901967453
BXD70 m 49.045 5.076880032 59.1137941347 38.9762058653
BXD71 m 49.5333333333 5.8622761062 61.1597753415 37.9068913252
BXD73 m 54.02 5.8622761062 65.6464420082 42.3935579918
BXD73a m 62.9333333333 5.8622761062 74.5597753415 51.3068913252
BXD73b m 43.7925 5.076880032 53.8612941347 33.7237058653
BXD75 m 54.68 4.540899546 63.6858032547 45.6741967453
BXD79 m 38.16 4.540899546 47.1658032547 29.1541967453
BXD81 m 45.905 5.076880032 55.9737941347 35.8362058653
BXD83 m 41.875 5.076880032 51.9437941347 31.8062058653
BXD87 m 43.175 5.076880032 53.2437941347 33.1062058653
BXD90 m 46.5033333333 5.8622761062 58.1297753415 34.8768913252
BXD98 m 43.94 4.540899546 52.9458032547 34.9341967453
BXD99 m 56.162 4.540899546 65.1678032547 47.1561967453
C57BL/6J m 57.225 5.076880032 67.2937941347 47.1562058653
DBA/2J m 53.462 4.540899546 62.4678032547 44.4561967453




  GWAS USING LINEAR MIXED MODELS