Project measure / variable:   Auwerx1   dist_treadmill1_CD

ID, description, units MPD:111316   dist_treadmill1_CD   distance traveled, first treadmill training   [m]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 23wks
Procedure treadmill endurance test
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  STRAIN COMPARISON PLOT
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Auwerx1 - distance traveled, first treadmill training CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means377.2   m
Median of the strain means354.8   m
SD of the strain means± 159.4
Coefficient of variation (CV)0.4227
Min–max range of strain means107.2   –   828.3   m
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 5606334.6922 100113.1195 9.2775 < 0.0001
Residuals 186 2007128.1556 10791.0116


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 354.8 52.78   4 26.392 0.1488 305.0, 408.0 -0.14
BXD100 m 551.7 58.23   3 33.617 0.1055 509.0, 618.0 1.09
BXD101 m 320.8 53.9   4 26.949 0.168 253.0, 380.0 -0.35
BXD11 m 647.0 39.598   2   28.0 0.0612 619.0, 675.0 1.69
BXD12 m 356.2 58.15   5 26.007 0.1633 311.0, 455.0 -0.13
BXD16 m 192.5 54.22   4 27.109 0.2817 148.0, 270.0 -1.16
BXD2 m 275.5 63.48   4 31.74 0.2304 208.0, 335.0 -0.64
BXD27 m 321.2 137.5   5 61.51 0.4282 111.0, 464.0 -0.35
BXD32 m 372.4 52.41   5 23.441 0.1407 301.0, 446.0 -0.03
BXD34 m 161.5 48.966   4 24.483 0.3032 89.0, 196.0 -1.35
BXD39 m 235.8 143.4   5 64.15 0.6084 90.0, 463.0 -0.89
BXD40 m 583.7 78.14   3 45.116 0.1339 528.0, 673.0 1.3
BXD43 m 828.3 153.3   3 88.51 0.1851 652.0, 930.0 2.83
BXD44 m 182.4 94.44   9 31.48 0.5176 78.0, 346.0 -1.22
BXD45 m 662.0 48.874   4 24.437 0.0738 592.0, 698.0 1.79
BXD48 m 318.0 122.2   5 54.65 0.3843 212.0, 525.0 -0.37
BXD48a m 390.2 145.5   4 72.75 0.3728 175.0, 479.0 0.08
BXD49 m 227.0 83.05   4 41.525 0.3659 168.0, 348.0 -0.94
BXD50 m 233.5 187.8   4 93.92 0.8045 86.0, 480.0 -0.9
BXD51 m 529.2 52.96   4 26.481 0.1001 494.0, 608.0 0.95
BXD53 m 318.6 89.91   5 40.209 0.2822 200.0, 452.0 -0.37
BXD55 m 237.8 65.49   5 29.287 0.2754 171.0, 343.0 -0.87
BXD56 m 285.7 161.1   3 93.03 0.5641 100.0, 389.0 -0.57
BXD6 m 376.4 46.014   5 20.578 0.1222 316.0, 430.0 -0.01
BXD60 m 312.0 100.6   5 44.968 0.3223 146.0, 417.0 -0.41
BXD61 m 391.3 25.027   3 14.449 0.064 367.0, 417.0 0.09
BXD62 m 587.8 15.392   4 7.696 0.0262 573.0, 607.0 1.32
BXD63 m 497.2 94.04   4 47.018 0.1891 407.0, 603.0 0.75
BXD64 m 380.2 51.06   4 25.532 0.1343 331.0, 449.0 0.02
BXD65 m 239.0 30.594   4 15.297 0.128 197.0, 267.0 -0.87
BXD65a m 228.0 49.234   5 22.018 0.2159 181.0, 297.0 -0.94
BXD65b m 195.0 39.353   4 19.677 0.2018 162.0, 242.0 -1.14
BXD66 m 107.2 22.152   5 9.9066 0.2066 86.0, 143.0 -1.69
BXD67 m 243.0 80.5   5 36.003 0.3313 148.0, 327.0 -0.84
BXD68 m 309.7 73.92   3 42.678 0.2387 228.0, 372.0 -0.42
BXD69 m 481.8 40.171   5 17.965 0.0834 444.0, 546.0 0.66
BXD70 m 546.8 225.8   4 112.9 0.413 419.0, 885.0 1.06
BXD71 m 263.4 80.58   5 36.036 0.3059 159.0, 347.0 -0.71
BXD73 m 442.5 155.5   4 77.76 0.3514 313.0, 653.0 0.41
BXD73a m 219.8 71.18   4 35.589 0.3239 149.0, 302.0 -0.99
BXD73b m 225.2 76.03   5 34.004 0.3376 128.0, 321.0 -0.95
BXD75 m 535.6 79.39   5 35.504 0.1482 451.0, 627.0 0.99
BXD77 m 340.8 207.0   5 92.56 0.6073 54.0, 551.0 -0.23
BXD79 m 218.4 55.24   5 24.705 0.2529 157.0, 284.0 -1.0
BXD8 m 509.0 252.1   4 126.1 0.4953 289.0, 862.0 0.83
BXD81 m 629.0 229.1   4 114.5 0.3642 360.0, 895.0 1.58
BXD83 m 503.7 96.99   3 56.0 0.1926 428.0, 613.0 0.79
BXD84 m 398.8 128.8   4 64.41 0.3231 266.0, 550.0 0.14
BXD85 m 156.2 58.44   5 26.133 0.3741 77.0, 241.0 -1.39
BXD87 m 245.0 82.31   4 41.156 0.336 171.0, 330.0 -0.83
BXD89 m 452.5 20.744   4 10.372 0.0458 435.0, 479.0 0.47
BXD90 m 233.2 40.194   4 20.097 0.1723 188.0, 280.0 -0.9
BXD95 m 562.0 136.8   4 68.39 0.2434 369.0, 688.0 1.16
BXD98 m 585.0 162.1   4 81.06 0.2771 357.0, 728.0 1.3
BXD99 m 413.6 36.596   5 16.366 0.0885 371.0, 466.0 0.23
C57BL/6J m 437.2 97.77   4 48.883 0.2236 321.0, 524.0 0.38
DBA/2J m 648.7 29.143   3 16.826 0.0449 628.0, 682.0 1.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 354.75 51.93989697 457.2170346633 252.2829653367
BXD100 m 551.6666666667 59.9750269946 669.9854067585 433.3479265748
BXD101 m 320.75 51.93989697 423.2170346633 218.2829653367
BXD11 m 647.0 73.4541067232 791.910270117 502.089729883
BXD12 m 356.2 46.4564561477 447.849301984 264.550698016
BXD16 m 192.5 51.93989697 294.9670346633 90.0329653367
BXD2 m 275.5 51.93989697 377.9670346633 173.0329653367
BXD27 m 321.2 46.4564561477 412.849301984 229.550698016
BXD32 m 372.4 46.4564561477 464.049301984 280.750698016
BXD34 m 161.5 51.93989697 263.9670346633 59.0329653367
BXD39 m 235.8 46.4564561477 327.449301984 144.150698016
BXD40 m 583.6666666667 59.9750269946 701.9854067585 465.3479265748
BXD43 m 828.3333333333 59.9750269946 946.6520734252 710.0145932415
BXD44 m 182.4444444444 34.62659798 250.7558008866 114.1330880023
BXD45 m 662.0 51.93989697 764.4670346633 559.5329653367
BXD48 m 318.0 46.4564561477 409.649301984 226.350698016
BXD48a m 390.25 51.93989697 492.7170346633 287.7829653367
BXD49 m 227.0 51.93989697 329.4670346633 124.5329653367
BXD50 m 233.5 51.93989697 335.9670346633 131.0329653367
BXD51 m 529.25 51.93989697 631.7170346633 426.7829653367
BXD53 m 318.6 46.4564561477 410.249301984 226.950698016
BXD55 m 237.8 46.4564561477 329.449301984 146.150698016
BXD56 m 285.6666666667 59.9750269946 403.9854067585 167.3479265748
BXD6 m 376.4 46.4564561477 468.049301984 284.750698016
BXD60 m 312.0 46.4564561477 403.649301984 220.350698016
BXD61 m 391.3333333333 59.9750269946 509.6520734252 273.0145932415
BXD62 m 587.75 51.93989697 690.2170346633 485.2829653367
BXD63 m 497.25 51.93989697 599.7170346633 394.7829653367
BXD64 m 380.25 51.93989697 482.7170346633 277.7829653367
BXD65 m 239.0 51.93989697 341.4670346633 136.5329653367
BXD65a m 228.0 46.4564561477 319.649301984 136.350698016
BXD65b m 195.0 51.93989697 297.4670346633 92.5329653367
BXD66 m 107.2 46.4564561477 198.849301984 15.550698016
BXD67 m 243.0 46.4564561477 334.649301984 151.350698016
BXD68 m 309.6666666667 59.9750269946 427.9854067585 191.3479265748
BXD69 m 481.8 46.4564561477 573.449301984 390.150698016
BXD70 m 546.75 51.93989697 649.2170346633 444.2829653367
BXD71 m 263.4 46.4564561477 355.049301984 171.750698016
BXD73 m 442.5 51.93989697 544.9670346633 340.0329653367
BXD73a m 219.75 51.93989697 322.2170346633 117.2829653367
BXD73b m 225.2 46.4564561477 316.849301984 133.550698016
BXD75 m 535.6 46.4564561477 627.249301984 443.950698016
BXD77 m 340.8 46.4564561477 432.449301984 249.150698016
BXD79 m 218.4 46.4564561477 310.049301984 126.750698016
BXD8 m 509.0 51.93989697 611.4670346633 406.5329653367
BXD81 m 629.0 51.93989697 731.4670346633 526.5329653367
BXD83 m 503.6666666667 59.9750269946 621.9854067585 385.3479265748
BXD84 m 398.75 51.93989697 501.2170346633 296.2829653367
BXD85 m 156.2 46.4564561477 247.849301984 64.550698016
BXD87 m 245.0 51.93989697 347.4670346633 142.5329653367
BXD89 m 452.5 51.93989697 554.9670346633 350.0329653367
BXD90 m 233.25 51.93989697 335.7170346633 130.7829653367
BXD95 m 562.0 51.93989697 664.4670346633 459.5329653367
BXD98 m 585.0 51.93989697 687.4670346633 482.5329653367
BXD99 m 413.6 46.4564561477 505.249301984 321.950698016
C57BL/6J m 437.25 51.93989697 539.7170346633 334.7829653367
DBA/2J m 648.6666666667 59.9750269946 766.9854067585 530.3479265748




  GWAS USING LINEAR MIXED MODELS