Project measure / variable:   Auwerx1   horiz_act_HFD

ID, description, units MPD:111305   horiz_act_HFD   horizontal activity (beam breaks) at night, basal activity test, for 48h   [n/h]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 23wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Auwerx1 - horizontal activity (beam breaks) at night, basal activity test, for 48h HFD

BXD40DBA/2JBXD45BXD55BXD69BXD43BXD101BXD27BXD89BXD12BXD99BXD73BXD1BXD65aBXD68BXD34BXD100BXD11BXD63BXD50BXD79BXD8BXD2BXD67BXD64BXD84BXD73bBXD53BXD70BXD98BXD56BXD73aBXD87BXD32BXD6BXD81BXD85BXD83BXD71C57BL/6JBXD75BXD61BXD39BXD77BXD95BXD65BXD49BXD16BXD66BXD62BXD48BXD90BXD51BXD48aBXD44BXD60 n/h 1,0002,0003,0004,0005,0006,0007,0008,0009,00010,00011,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means3818.0   n/h
Median of the strain means3604.0   n/h
SD of the strain means± 1131.0
Coefficient of variation (CV)0.2962
Min–max range of strain means2130.0   –   7176.0   n/h
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 314467703.7242 5717594.6132 5.9294 < 0.0001
Residuals 193 186105207.7056 964275.6876


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 56 (56)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 4648.0 1683.0   5 752.5 0.362 2852.0, 6710.0 0.73
BXD100 m 4302.0 1363.0   5 609.7 0.3169 3320.0, 6679.0 0.43
BXD101 m 5233.0 1016.0   4 508.0 0.1942 4298.0, 6124.0 1.25
BXD11 m 4131.0 1135.0   5 507.5 0.2747 2838.0, 5891.0 0.28
BXD12 m 4828.0 981.6   5 439.0 0.2033 3440.0, 6012.0 0.89
BXD16 m 2522.0 120.0   5 53.67 0.0476 2349.0, 2659.0 -1.15
BXD2 m 3860.0 443.1   5 198.2 0.1148 3435.0, 4557.0 0.04
BXD27 m 5207.0 2214.0   4 1107.0 0.4251 3111.0, 7350.0 1.23
BXD32 m 3467.0 607.1   3 350.5 0.1751 2766.0, 3818.0 -0.31
BXD34 m 4395.0 791.7   5 354.1 0.1801 3467.0, 5660.0 0.51
BXD39 m 3037.0 464.7   5 207.8 0.153 2344.0, 3556.0 -0.69
BXD40 m 7176.0 2502.0   4 1251.0 0.3487 4602.0, 10595.0 2.97
BXD43 m 5489.0 587.2   3 339.0 0.107 4964.0, 6123.0 1.48
BXD44 m 2218.0 387.7   9 129.2 0.1748 1422.0, 2901.0 -1.41
BXD45 m 5811.0 681.9   4 340.9 0.1173 5011.0, 6635.0 1.76
BXD48 m 2425.0 876.7   5 392.1 0.3615 1499.0, 3745.0 -1.23
BXD48a m 2257.0 196.0   3 113.2 0.0868 2060.0, 2452.0 -1.38
BXD49 m 2538.0 231.9   5 103.7 0.0914 2257.0, 2879.0 -1.13
BXD50 m 4035.0 1195.0   5 534.6 0.2962 2713.0, 5710.0 0.19
BXD51 m 2302.0 1082.0   4 541.0 0.4699 1192.0, 3427.0 -1.34
BXD53 m 3615.0 741.6   5 331.7 0.2052 2515.0, 4297.0 -0.18
BXD55 m 5796.0 1105.0   4 552.4 0.1906 4584.0, 7049.0 1.75
BXD56 m 3525.0 291.5   3 168.3 0.0827 3207.0, 3780.0 -0.26
BXD6 m 3466.0 654.5   5 292.7 0.1888 2806.0, 4521.0 -0.31
BXD60 m 2130.0 155.1   5 69.38 0.0728 1965.0, 2341.0 -1.49
BXD61 m 3044.0 713.5   5 319.1 0.2344 2341.0, 4206.0 -0.68
BXD62 m 2446.0 221.3   4 110.7 0.0905 2150.0, 2681.0 -1.21
BXD63 m 4072.0 301.9   2   213.5 0.0741 3859.0, 4286.0 0.22
BXD64 m 3773.0 249.0   4 124.5 0.066 3435.0, 3983.0 -0.04
BXD65 m 2823.0 139.3   4 69.63 0.0493 2691.0, 2995.0 -0.88
BXD65a m 4594.0 481.9   4 240.9 0.1049 4067.0, 5235.0 0.69
BXD66 m 2509.0 791.2   5 353.8 0.3153 1761.0, 3790.0 -1.16
BXD67 m 3795.0 686.1   5 306.8 0.1808 3017.0, 4886.0 -0.02
BXD68 m 4548.0 833.2   4 416.6 0.1832 3398.0, 5277.0 0.64
BXD69 m 5686.0 1870.0   5 836.1 0.3288 3857.0, 8246.0 1.65
BXD70 m 3594.0 636.7   4 318.4 0.1772 2757.0, 4296.0 -0.2
BXD71 m 3226.0 249.0   3 143.7 0.0772 3033.0, 3507.0 -0.52
BXD73 m 4797.0 657.1   4 328.6 0.137 4393.0, 5779.0 0.86
BXD73a m 3521.0 521.5   5 233.2 0.1481 2822.0, 4141.0 -0.26
BXD73b m 3626.0 591.9   5 264.7 0.1632 2894.0, 4379.0 -0.17
BXD75 m 3162.0 511.9   5 228.9 0.1619 2604.0, 3971.0 -0.58
BXD77 m 3011.0 786.1   5 351.6 0.261 2437.0, 4323.0 -0.71
BXD79 m 4007.0 950.5   5 425.1 0.2372 3163.0, 5647.0 0.17
BXD8 m 3939.0 721.0   5 322.5 0.183 2841.0, 4760.0 0.11
BXD81 m 3340.0 2203.0   4 1101.0 0.6595 1887.0, 6621.0 -0.42
BXD83 m 3266.0 283.2   4 141.6 0.0867 2863.0, 3521.0 -0.49
BXD84 m 3685.0 965.4   3 557.4 0.262 2574.0, 4323.0 -0.12
BXD85 m 3328.0 447.9   4 224.0 0.1346 2819.0, 3876.0 -0.43
BXD87 m 3478.0 162.8   4 81.42 0.0468 3348.0, 3715.0 -0.3
BXD89 m 5087.0 2080.0   4 1040.0 0.4088 3577.0, 8121.0 1.12
BXD90 m 2351.0 340.7   4 170.4 0.1449 2080.0, 2849.0 -1.3
BXD95 m 2851.0 681.2   5 304.6 0.2389 2230.0, 3751.0 -0.86
BXD98 m 3552.0 351.1   5 157.0 0.0988 3051.0, 4014.0 -0.24
BXD99 m 4826.0 1328.0   5 593.9 0.2752 3248.0, 6263.0 0.89
C57BL/6J m 3195.0 771.4   4 385.7 0.2415 2378.0, 4209.0 -0.55
DBA/2J m 6291.0 1819.0   5 813.3 0.2891 4097.0, 8832.0 2.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 4648.4 439.1527496427 5514.554878633 3782.245121367
BXD100 m 4302.2 439.1527496427 5168.354878633 3436.045121367
BXD101 m 5233.0 490.9877003535 6201.3905938333 4264.6094061668
BXD11 m 4131.4 439.1527496427 4997.554878633 3265.245121367
BXD12 m 4828.0 439.1527496427 5694.154878633 3961.845121367
BXD16 m 2521.6 439.1527496427 3387.754878633 1655.445121367
BXD2 m 3860.4 439.1527496427 4726.554878633 2994.245121367
BXD27 m 5206.75 490.9877003535 6175.1405938332 4238.3594061667
BXD32 m 3467.0 566.9437619357 4585.2011400607 2348.7988599394
BXD34 m 4395.0 439.1527496427 5261.154878633 3528.845121367
BXD39 m 3036.8 439.1527496427 3902.954878633 2170.645121367
BXD40 m 7175.5 490.9877003535 8143.8905938333 6207.1094061667
BXD43 m 5488.6666666667 566.9437619357 6606.8678067273 4370.465526606
BXD44 m 2217.7777777777 327.325133569 2863.3715069999 1572.1840485556
BXD45 m 5811.25 490.9877003535 6779.6405938332 4842.8594061667
BXD48 m 2425.2 439.1527496427 3291.354878633 1559.045121367
BXD48a m 2257.0 566.9437619357 3375.2011400607 1138.7988599393
BXD49 m 2537.6 439.1527496427 3403.754878633 1671.4451213669
BXD50 m 4034.8 439.1527496427 4900.954878633 3168.645121367
BXD51 m 2302.25 490.9877003535 3270.6405938332 1333.8594061667
BXD53 m 3614.8 439.1527496427 4480.954878633 2748.645121367
BXD55 m 5796.5 490.9877003535 6764.8905938333 4828.1094061667
BXD56 m 3524.6666666667 566.9437619357 4642.8678067273 2406.465526606
BXD6 m 3466.4 439.1527496427 4332.554878633 2600.245121367
BXD60 m 2130.2 439.1527496427 2996.354878633 1264.045121367
BXD61 m 3044.4 439.1527496427 3910.554878633 2178.245121367
BXD62 m 2446.0 490.9877003535 3414.3905938333 1477.6094061667
BXD63 m 4072.5 694.3614647983 5442.0111114735 2702.9888885265
BXD64 m 3773.25 490.9877003535 4741.6405938333 2804.8594061667
BXD65 m 2823.0 490.9877003535 3791.3905938333 1854.6094061668
BXD65a m 4594.0 490.9877003535 5562.3905938333 3625.6094061667
BXD66 m 2509.2 439.1527496427 3375.354878633 1643.045121367
BXD67 m 3795.4 439.1527496427 4661.554878633 2929.245121367
BXD68 m 4548.0 490.9877003535 5516.3905938333 3579.6094061668
BXD69 m 5686.0 439.1527496427 6552.154878633 4819.845121367
BXD70 m 3593.5 490.9877003535 4561.8905938333 2625.1094061667
BXD71 m 3226.0 566.9437619357 4344.2011400607 2107.7988599394
BXD73 m 4796.75 490.9877003535 5765.1405938333 3828.3594061667
BXD73a m 3521.4 439.1527496427 4387.554878633 2655.245121367
BXD73b m 3626.4 439.1527496427 4492.554878633 2760.245121367
BXD75 m 3161.6 439.1527496427 4027.754878633 2295.445121367
BXD77 m 3011.4 439.1527496427 3877.554878633 2145.245121367
BXD79 m 4007.2 439.1527496427 4873.354878633 3141.045121367
BXD8 m 3939.4 439.1527496427 4805.554878633 3073.245121367
BXD81 m 3340.25 490.9877003535 4308.6405938333 2371.8594061668
BXD83 m 3265.5 490.9877003535 4233.8905938333 2297.1094061668
BXD84 m 3684.6666666667 566.9437619357 4802.8678067273 2566.465526606
BXD85 m 3328.0 490.9877003535 4296.3905938333 2359.6094061667
BXD87 m 3478.0 490.9877003535 4446.3905938333 2509.6094061667
BXD89 m 5086.75 490.9877003535 6055.1405938333 4118.3594061667
BXD90 m 2351.0 490.9877003535 3319.3905938333 1382.6094061667
BXD95 m 2851.2 439.1527496427 3717.354878633 1985.045121367
BXD98 m 3552.2 439.1527496427 4418.354878633 2686.045121367
BXD99 m 4826.2 439.1527496427 5692.354878633 3960.045121367
C57BL/6J m 3195.0 490.9877003535 4163.3905938333 2226.6094061667
DBA/2J m 6291.0 439.1527496427 7157.154878633 5424.845121367




  GWAS USING LINEAR MIXED MODELS

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