Project measure / variable:   Auwerx1   temp_t6_HFD

ID, description, units MPD:111295   temp_t6_HFD   body temperature (rectal) in cold (4°C) room, 6h exposed to cold   [°C]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 21wks
Procedure body temperature
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  STRAIN COMPARISON PLOT
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Auwerx1 - body temperature (rectal) in cold (4°C) room, 6h exposed to cold HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means35.005   °C
Median of the strain means35.22   °C
SD of the strain means± 1.393
Coefficient of variation (CV)0.0398
Min–max range of strain means30.2   –   37.6   °C
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 477.7157 8.6857 11.5584 < 0.0001
Residuals 194 145.7839 0.7515


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 35.32 0.41473   5 0.18547 0.0117 34.7, 35.7 0.23
BXD100 m 35.9 0.82765   5 0.37014 0.0231 35.0, 37.2 0.64
BXD101 m 34.375 0.62915   4 0.31458 0.0183 33.8, 35.1 -0.45
BXD11 m 35.76 0.29665   5 0.13266 0.0083 35.3, 36.1 0.54
BXD12 m 36.44 0.53198   5 0.23791 0.0146 35.6, 37.0 1.03
BXD16 m 35.22 0.64962   5 0.29052 0.0184 34.2, 35.8 0.15
BXD2 m 36.18 0.56303   5 0.25179 0.0156 35.5, 37.0 0.84
BXD27 m 33.1 0.84853   2   0.6 0.0256 32.5, 33.7 -1.37
BXD32 m 35.267 0.73711   3 0.42557 0.0209 34.7, 36.1 0.19
BXD34 m 34.92 0.10954   5 0.04899 0.0031 34.8, 35.0 -0.06
BXD39 m 36.14 0.33615   5 0.15033 0.0093 35.6, 36.5 0.81
BXD40 m 33.225 0.73655   4 0.36827 0.0222 32.3, 34.1 -1.28
BXD43 m 35.8 0.2   3 0.11547 0.0056 35.6, 36.0 0.57
BXD44 m 34.044 0.80795   9 0.26932 0.0237 32.9, 35.3 -0.69
BXD45 m 35.88 0.46583   5 0.20833 0.013 35.4, 36.5 0.63
BXD48 m 34.56 0.77974   5 0.34871 0.0226 33.3, 35.3 -0.32
BXD48a m 35.5 0.36056   3 0.20817 0.0102 35.2, 35.9 0.36
BXD49 m 34.74 0.83247   5 0.37229 0.024 33.5, 35.7 -0.19
BXD50 m 34.78 1.455   5 0.65069 0.0418 32.2, 35.7 -0.16
BXD51 m 34.975 0.41932   4 0.20966 0.012 34.7, 35.6 -0.02
BXD53 m 34.5 0.21213   5 0.09487 0.0061 34.2, 34.7 -0.36
BXD55 m 36.2 0.08165   4 0.04082 0.0023 36.1, 36.3 0.86
BXD56 m 35.333 0.55076   3 0.31798 0.0156 34.7, 35.7 0.24
BXD6 m 34.16 1.4153   5 0.63293 0.0414 31.8, 35.6 -0.61
BXD60 m 31.125 1.4773   4 0.73866 0.0475 30.0, 33.3 -2.79
BXD61 m 35.84 0.48785   5 0.21817 0.0136 35.1, 36.3 0.6
BXD62 m 35.5 0.42426   4 0.21213 0.012 35.2, 36.1 0.36
BXD63 m 34.05 0.21213   2   0.15 0.0062 33.9, 34.2 -0.69
BXD64 m 33.3 0.46904   4 0.23452 0.0141 32.9, 33.8 -1.22
BXD65 m 35.25 0.73258   4 0.36629 0.0208 34.2, 35.8 0.18
BXD65a m 32.35 1.8806   4 0.9403 0.0581 29.8, 34.0 -1.91
BXD66 m 30.2 2.5846   5 1.1559 0.0856 26.0, 32.9 -3.45
BXD67 m 34.52 1.0035   5 0.44878 0.0291 33.1, 35.4 -0.35
BXD68 m 35.15 0.61914   4 0.30957 0.0176 34.6, 36.0 0.1
BXD69 m 34.08 1.2853   5 0.5748 0.0377 32.6, 35.7 -0.66
BXD70 m 37.6 1.0231   4 0.51153 0.0272 36.1, 38.3 1.86
BXD71 m 34.533 0.94516   3 0.54569 0.0274 33.8, 35.6 -0.34
BXD73 m 35.96 0.7733   5 0.34583 0.0215 34.9, 37.0 0.69
BXD73a m 36.88 0.31145   5 0.13928 0.0084 36.4, 37.2 1.35
BXD73b m 35.98 0.249   5 0.11136 0.0069 35.8, 36.4 0.7
BXD75 m 37.3 0.21213   5 0.09487 0.0057 37.1, 37.6 1.65
BXD77 m 35.22 0.41473   5 0.18547 0.0118 34.6, 35.6 0.15
BXD79 m 34.88 0.58907   5 0.26344 0.0169 34.0, 35.6 -0.09
BXD8 m 36.12 1.0426   5 0.46626 0.0289 35.1, 37.4 0.8
BXD81 m 33.575 0.71356   4 0.35678 0.0213 32.6, 34.3 -1.03
BXD83 m 36.725 0.4113   4 0.20565 0.0112 36.2, 37.1 1.23
BXD84 m 35.167 0.97125   3 0.56075 0.0276 34.1, 36.0 0.12
BXD85 m 35.075 0.45   4 0.225 0.0128 34.5, 35.6 0.05
BXD87 m 36.46 0.38471   5 0.17205 0.0106 36.0, 36.8 1.04
BXD89 m 35.625 0.91788   4 0.45894 0.0258 34.8, 36.8 0.45
BXD90 m 35.9 0.80416   4 0.40208 0.0224 34.8, 36.7 0.64
BXD95 m 34.64 0.74364   5 0.33257 0.0215 33.6, 35.6 -0.26
BXD98 m 32.38 1.63   5 0.72897 0.0503 29.7, 34.1 -1.88
BXD99 m 34.48 1.0592   5 0.47371 0.0307 33.1, 35.5 -0.38
C57BL/6J m 36.12 0.49699   5 0.22226 0.0138 35.6, 36.7 0.8
DBA/2J m 35.96 0.59414   5 0.26571 0.0165 35.0, 36.6 0.69


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 35.32 0.3876759845 36.0846007574 34.5553992426
BXD100 m 35.9 0.3876759845 36.6646007574 35.1353992426
BXD101 m 34.375 0.4334349273 35.2298496346 33.5201503654
BXD11 m 35.76 0.3876759845 36.5246007574 34.9953992426
BXD12 m 36.44 0.3876759845 37.2046007574 35.6753992426
BXD16 m 35.22 0.3876759845 35.9846007574 34.4553992426
BXD2 m 36.18 0.3876759845 36.9446007574 35.4153992426
BXD27 m 33.1 0.6129695526 34.308939947 31.891060053
BXD32 m 35.2666666667 0.5004875439 36.253762 34.2795713334
BXD34 m 34.92 0.3876759845 35.6846007574 34.1553992426
BXD39 m 36.14 0.3876759845 36.9046007574 35.3753992426
BXD40 m 33.225 0.4334349273 34.0798496346 32.3701503654
BXD43 m 35.8 0.5004875439 36.7870953333 34.8129046667
BXD44 m 34.0444444444 0.2889566182 34.6143442008 33.4745446881
BXD45 m 35.88 0.3876759845 36.6446007574 35.1153992426
BXD48 m 34.56 0.3876759845 35.3246007574 33.7953992426
BXD48a m 35.5 0.5004875439 36.4870953333 34.5129046667
BXD49 m 34.74 0.3876759845 35.5046007574 33.9753992426
BXD50 m 34.78 0.3876759845 35.5446007574 34.0153992426
BXD51 m 34.975 0.4334349273 35.8298496346 34.1201503654
BXD53 m 34.5 0.3876759845 35.2646007574 33.7353992426
BXD55 m 36.2 0.4334349273 37.0548496346 35.3451503654
BXD56 m 35.3333333333 0.5004875439 36.3204286666 34.346238
BXD6 m 34.16 0.3876759845 34.9246007574 33.3953992426
BXD60 m 31.125 0.4334349273 31.9798496346 30.2701503654
BXD61 m 35.84 0.3876759845 36.6046007574 35.0753992426
BXD62 m 35.5 0.4334349273 36.3548496346 34.6451503654
BXD63 m 34.05 0.6129695526 35.258939947 32.841060053
BXD64 m 33.3 0.4334349273 34.1548496346 32.4451503654
BXD65 m 35.25 0.4334349273 36.1048496346 34.3951503654
BXD65a m 32.35 0.4334349273 33.2048496346 31.4951503654
BXD66 m 30.2 0.3876759845 30.9646007574 29.4353992426
BXD67 m 34.52 0.3876759845 35.2846007574 33.7553992426
BXD68 m 35.15 0.4334349273 36.0048496346 34.2951503654
BXD69 m 34.08 0.3876759845 34.8446007574 33.3153992426
BXD70 m 37.6 0.4334349273 38.4548496346 36.7451503654
BXD71 m 34.5333333333 0.5004875439 35.5204286666 33.546238
BXD73 m 35.96 0.3876759845 36.7246007574 35.1953992426
BXD73a m 36.88 0.3876759845 37.6446007574 36.1153992426
BXD73b m 35.98 0.3876759845 36.7446007574 35.2153992426
BXD75 m 37.3 0.3876759845 38.0646007574 36.5353992426
BXD77 m 35.22 0.3876759845 35.9846007574 34.4553992426
BXD79 m 34.88 0.3876759845 35.6446007574 34.1153992426
BXD8 m 36.12 0.3876759845 36.8846007574 35.3553992426
BXD81 m 33.575 0.4334349273 34.4298496346 32.7201503654
BXD83 m 36.725 0.4334349273 37.5798496346 35.8701503654
BXD84 m 35.1666666667 0.5004875439 36.153762 34.1795713334
BXD85 m 35.075 0.4334349273 35.9298496346 34.2201503654
BXD87 m 36.46 0.3876759845 37.2246007574 35.6953992426
BXD89 m 35.625 0.4334349273 36.4798496346 34.7701503654
BXD90 m 35.9 0.4334349273 36.7548496346 35.0451503654
BXD95 m 34.64 0.3876759845 35.4046007574 33.8753992426
BXD98 m 32.38 0.3876759845 33.1446007574 31.6153992426
BXD99 m 34.48 0.3876759845 35.2446007574 33.7153992426
C57BL/6J m 36.12 0.3876759845 36.8846007574 35.3553992426
DBA/2J m 35.96 0.3876759845 36.7246007574 35.1953992426




  GWAS USING LINEAR MIXED MODELS