Project measure / variable:   Auwerx1   temp_t6_CD

ID, description, units MPD:111294   temp_t6_CD   body temperature (rectal) in cold (4°C) room, 6h exposed to cold   [°C]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 21wks
Procedure body temperature
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  STRAIN COMPARISON PLOT
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Auwerx1 - body temperature (rectal) in cold (4°C) room, 6h exposed to cold CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means34.722   °C
Median of the strain means34.925   °C
SD of the strain means± 1.3478
Coefficient of variation (CV)0.0388
Min–max range of strain means29.925   –   37.18   °C
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 437.1485 7.8062 9.0222 < 0.0001
Residuals 195 168.7183 0.8652


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 33.82 1.4567   5 0.65146 0.0431 32.2, 36.0 -0.67
BXD100 m 35.633 0.65064   3 0.37565 0.0183 35.0, 36.3 0.68
BXD101 m 34.975 0.43493   4 0.21747 0.0124 34.6, 35.6 0.19
BXD11 m 35.433 1.365   3 0.78811 0.0385 34.2, 36.9 0.53
BXD12 m 35.02 0.43243   5 0.19339 0.0123 34.3, 35.4 0.22
BXD16 m 35.15 0.54467   4 0.27234 0.0155 34.7, 35.9 0.32
BXD2 m 36.0 0.72572   4 0.36286 0.0202 35.2, 36.9 0.95
BXD27 m 34.48 1.1411   5 0.51029 0.0331 32.5, 35.3 -0.18
BXD32 m 35.8 0.63246   5 0.28284 0.0177 35.3, 36.9 0.8
BXD34 m 34.6 0.55976   4 0.27988 0.0162 33.8, 35.1 -0.09
BXD39 m 35.78 0.53572   5 0.23958 0.015 35.3, 36.5 0.78
BXD40 m 34.3 0.36056   3 0.20817 0.0105 34.0, 34.7 -0.31
BXD43 m 35.967 0.40415   3 0.23333 0.0112 35.6, 36.4 0.92
BXD44 m 34.267 1.0909   9 0.36362 0.0318 32.8, 35.7 -0.34
BXD45 m 35.52 0.98336   5 0.43977 0.0277 34.2, 36.8 0.59
BXD48 m 32.48 0.77266   5 0.34554 0.0238 31.2, 33.0 -1.66
BXD48a m 33.78 0.43243   5 0.19339 0.0128 33.2, 34.3 -0.7
BXD49 m 34.425 0.81803   4 0.40901 0.0238 33.3, 35.2 -0.22
BXD50 m 34.275 0.15   4 0.075 0.0044 34.1, 34.4 -0.33
BXD51 m 35.46 0.52726   5 0.2358 0.0149 34.9, 36.2 0.55
BXD53 m 29.925 1.8998   4 0.94989 0.0635 27.9, 32.4 -3.56
BXD55 m 36.14 0.71972   5 0.32187 0.0199 35.1, 36.8 1.05
BXD56 m 34.2 1.1576   4 0.57879 0.0338 33.2, 35.6 -0.39
BXD6 m 35.36 0.99146   5 0.4434 0.028 33.6, 35.9 0.47
BXD60 m 33.775 2.1422   4 1.0711 0.0634 31.7, 36.0 -0.7
BXD61 m 35.867 0.55076   3 0.31798 0.0154 35.3, 36.4 0.85
BXD62 m 35.55 0.75939   4 0.37969 0.0214 34.8, 36.5 0.61
BXD63 m 34.15 0.9   4 0.45 0.0264 33.4, 35.2 -0.42
BXD64 m 33.85 0.41231   4 0.20616 0.0122 33.4, 34.2 -0.65
BXD65 m 34.1 0.73485   4 0.36742 0.0215 33.7, 35.2 -0.46
BXD65a m 34.18 0.66858   5 0.299 0.0196 33.5, 35.0 -0.4
BXD65b m 34.875 0.66018   4 0.33009 0.0189 34.0, 35.6 0.11
BXD66 m 32.84 0.54589   5 0.24413 0.0166 32.1, 33.4 -1.4
BXD67 m 34.72 0.29496   5 0.13191 0.0085 34.4, 35.0 0.0
BXD68 m 34.925 0.47871   4 0.23936 0.0137 34.4, 35.5 0.15
BXD69 m 33.32 1.5834   5 0.7081 0.0475 31.2, 35.3 -1.04
BXD70 m 36.25 0.52599   4 0.263 0.0145 35.8, 37.0 1.13
BXD71 m 32.78 0.9985   5 0.44654 0.0305 31.2, 33.7 -1.44
BXD73 m 34.6 0.21602   4 0.10801 0.0062 34.4, 34.9 -0.09
BXD73a m 36.24 0.53666   5 0.24 0.0148 35.4, 36.8 1.13
BXD73b m 34.86 0.59414   5 0.26571 0.017 34.1, 35.5 0.1
BXD75 m 37.18 0.54498   5 0.24372 0.0147 36.7, 38.1 1.82
BXD77 m 35.4 0.61237   5 0.27386 0.0173 34.5, 36.1 0.5
BXD79 m 35.58 0.72938   5 0.32619 0.0205 34.7, 36.7 0.64
BXD8 m 36.425 1.315   4 0.65749 0.0361 34.5, 37.4 1.26
BXD81 m 32.075 0.93941   4 0.46971 0.0293 31.2, 33.3 -1.96
BXD83 m 36.233 1.0017   3 0.57831 0.0276 35.1, 37.0 1.12
BXD84 m 32.05 2.8641   4 1.4321 0.0894 28.1, 34.4 -1.98
BXD85 m 35.0 0.46904   5 0.20976 0.0134 34.3, 35.5 0.21
BXD87 m 36.28 0.39623   5 0.1772 0.0109 35.9, 36.9 1.16
BXD89 m 33.825 0.57373   4 0.28687 0.017 33.1, 34.5 -0.67
BXD90 m 35.175 0.3594   4 0.1797 0.0102 34.9, 35.7 0.34
BXD95 m 34.925 0.84607   4 0.42303 0.0242 33.9, 35.8 0.15
BXD98 m 31.975 1.8025   4 0.90127 0.0564 29.8, 34.1 -2.04
BXD99 m 35.78 0.76616   5 0.34264 0.0214 35.1, 36.8 0.78
C57BL/6J m 35.32 0.54498   5 0.24372 0.0154 34.6, 36.1 0.44
DBA/2J m 36.275 0.48563   4 0.24281 0.0134 36.0, 37.0 1.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 33.82 0.4159861109 34.6404094931 32.9995905069
BXD100 m 35.6333333333 0.5370357599 36.6924774347 34.574189232
BXD101 m 34.975 0.4650866108 35.892245698 34.057754302
BXD11 m 35.4333333333 0.5370357599 36.4924774347 34.374189232
BXD12 m 35.02 0.4159861109 35.8404094931 34.1995905069
BXD16 m 35.15 0.4650866108 36.067245698 34.232754302
BXD2 m 36.0 0.4650866108 36.917245698 35.082754302
BXD27 m 34.48 0.4159861109 35.3004094931 33.6595905069
BXD32 m 35.8 0.4159861109 36.6204094931 34.9795905069
BXD34 m 34.6 0.4650866108 35.517245698 33.682754302
BXD39 m 35.78 0.4159861109 36.6004094931 34.9595905069
BXD40 m 34.3 0.5370357599 35.3591441013 33.2408558987
BXD43 m 35.9666666667 0.5370357599 37.025810768 34.9075225653
BXD44 m 34.2666666667 0.3100577405 34.8781637987 33.6551695346
BXD45 m 35.52 0.4159861109 36.3404094931 34.6995905069
BXD48 m 32.48 0.4159861109 33.3004094931 31.6595905069
BXD48a m 33.78 0.4159861109 34.6004094931 32.9595905069
BXD49 m 34.425 0.4650866108 35.342245698 33.507754302
BXD50 m 34.275 0.4650866108 35.192245698 33.357754302
BXD51 m 35.46 0.4159861109 36.2804094931 34.6395905069
BXD53 m 29.925 0.4650866108 30.842245698 29.007754302
BXD55 m 36.14 0.4159861109 36.9604094931 35.3195905069
BXD56 m 34.2 0.4650866108 35.117245698 33.282754302
BXD6 m 35.36 0.4159861109 36.1804094931 34.5395905069
BXD60 m 33.775 0.4650866108 34.692245698 32.857754302
BXD61 m 35.8666666667 0.5370357599 36.925810768 34.8075225653
BXD62 m 35.55 0.4650866108 36.467245698 34.632754302
BXD63 m 34.15 0.4650866108 35.067245698 33.232754302
BXD64 m 33.85 0.4650866108 34.767245698 32.932754302
BXD65 m 34.1 0.4650866108 35.017245698 33.182754302
BXD65a m 34.18 0.4159861109 35.0004094931 33.3595905069
BXD65b m 34.875 0.4650866108 35.792245698 33.957754302
BXD66 m 32.84 0.4159861109 33.6604094931 32.0195905069
BXD67 m 34.72 0.4159861109 35.5404094931 33.8995905069
BXD68 m 34.925 0.4650866108 35.842245698 34.007754302
BXD69 m 33.32 0.4159861109 34.1404094931 32.4995905069
BXD70 m 36.25 0.4650866108 37.167245698 35.332754302
BXD71 m 32.78 0.4159861109 33.6004094931 31.9595905069
BXD73 m 34.6 0.4650866108 35.517245698 33.682754302
BXD73a m 36.24 0.4159861109 37.0604094931 35.4195905069
BXD73b m 34.86 0.4159861109 35.6804094931 34.0395905069
BXD75 m 37.18 0.4159861109 38.0004094931 36.3595905069
BXD77 m 35.4 0.4159861109 36.2204094931 34.5795905069
BXD79 m 35.58 0.4159861109 36.4004094931 34.7595905069
BXD8 m 36.425 0.4650866108 37.342245698 35.507754302
BXD81 m 32.075 0.4650866108 32.992245698 31.157754302
BXD83 m 36.2333333333 0.5370357599 37.2924774347 35.174189232
BXD84 m 32.05 0.4650866108 32.967245698 31.132754302
BXD85 m 35.0 0.4159861109 35.8204094931 34.1795905069
BXD87 m 36.28 0.4159861109 37.1004094931 35.4595905069
BXD89 m 33.825 0.4650866108 34.742245698 32.907754302
BXD90 m 35.175 0.4650866108 36.092245698 34.257754302
BXD95 m 34.925 0.4650866108 35.842245698 34.007754302
BXD98 m 31.975 0.4650866108 32.892245698 31.057754302
BXD99 m 35.78 0.4159861109 36.6004094931 34.9595905069
C57BL/6J m 35.32 0.4159861109 36.1404094931 34.4995905069
DBA/2J m 36.275 0.4650866108 37.192245698 35.357754302




  GWAS USING LINEAR MIXED MODELS