Project measure / variable:   Auwerx1   temp_t4_HFD

ID, description, units MPD:111291   temp_t4_HFD   body temperature (rectal) in cold (4°C) room, 4h exposed to cold   [°C]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 21wks
Procedure body temperature
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  STRAIN COMPARISON PLOT
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Auwerx1 - body temperature (rectal) in cold (4°C) room, 4h exposed to cold HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means35.08   °C
Median of the strain means35.23   °C
SD of the strain means± 1.2319
Coefficient of variation (CV)0.0351
Min–max range of strain means30.72   –   37.1   °C
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 376.5661 6.8467 13.5542 < 0.0001
Residuals 195 98.5003 0.5051


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 35.6 0.60415   5 0.27019 0.017 35.1, 36.6 0.42
BXD100 m 36.08 0.22804   5 0.10198 0.0063 35.8, 36.4 0.81
BXD101 m 34.525 0.66018   4 0.33009 0.0191 33.8, 35.3 -0.45
BXD11 m 35.54 0.57706   5 0.25807 0.0162 34.9, 36.1 0.37
BXD12 m 36.52 0.5933   5 0.26533 0.0162 35.6, 37.1 1.17
BXD16 m 34.86 0.57706   5 0.25807 0.0166 34.2, 35.6 -0.18
BXD2 m 34.7 0.67823   5 0.30332 0.0195 34.0, 35.4 -0.31
BXD27 m 32.6 0.91652   3 0.52915 0.0281 31.8, 33.6 -2.01
BXD32 m 35.767 0.58595   3 0.3383 0.0164 35.1, 36.2 0.56
BXD34 m 33.8 0.45826   5 0.20494 0.0136 33.1, 34.3 -1.04
BXD39 m 35.32 0.55408   5 0.24779 0.0157 34.4, 35.8 0.2
BXD40 m 33.8 0.49666   4 0.24833 0.0147 33.1, 34.2 -1.04
BXD43 m 36.733 0.15275   3 0.08819 0.0042 36.6, 36.9 1.34
BXD44 m 34.433 0.70356   9 0.23452 0.0204 33.3, 35.2 -0.52
BXD45 m 36.88 0.32711   5 0.14629 0.0089 36.4, 37.2 1.46
BXD48 m 35.18 0.58052   5 0.25962 0.0165 34.3, 35.7 0.08
BXD48a m 34.967 0.45092   3 0.26034 0.0129 34.5, 35.4 -0.09
BXD49 m 35.5 0.6892   5 0.30822 0.0194 34.7, 36.4 0.34
BXD50 m 34.5 0.886   5 0.39623 0.0257 33.2, 35.7 -0.47
BXD51 m 35.425 0.47871   4 0.23936 0.0135 35.0, 36.1 0.28
BXD53 m 34.68 0.51672   5 0.23108 0.0149 34.1, 35.4 -0.32
BXD55 m 36.275 0.25   4 0.125 0.0069 36.0, 36.6 0.97
BXD56 m 35.667 0.41633   3 0.24037 0.0117 35.2, 36.0 0.48
BXD6 m 34.4 0.96177   5 0.43012 0.028 32.8, 35.1 -0.55
BXD60 m 33.375 0.88081   4 0.44041 0.0264 32.6, 34.6 -1.38
BXD61 m 36.06 0.55498   5 0.24819 0.0154 35.1, 36.5 0.8
BXD62 m 35.9 0.49666   4 0.24833 0.0138 35.5, 36.6 0.67
BXD63 m 35.35 0.49497   2   0.35 0.014 35.0, 35.7 0.22
BXD64 m 33.65 0.75939   4 0.37969 0.0226 32.9, 34.7 -1.16
BXD65 m 35.175 0.70415   4 0.35208 0.02 34.6, 36.2 0.08
BXD65a m 32.875 1.513   4 0.7565 0.046 30.8, 34.3 -1.79
BXD66 m 30.72 1.9331   5 0.86452 0.0629 28.3, 32.8 -3.54
BXD67 m 34.52 0.79812   5 0.35693 0.0231 33.3, 35.5 -0.45
BXD68 m 34.525 0.68496   4 0.34248 0.0198 33.7, 35.3 -0.45
BXD69 m 33.66 0.69857   5 0.31241 0.0208 33.0, 34.6 -1.15
BXD70 m 37.1 1.3638   4 0.68191 0.0368 35.3, 38.6 1.64
BXD71 m 34.7 0.2   3 0.11547 0.0058 34.5, 34.9 -0.31
BXD73 m 35.28 0.60581   5 0.27092 0.0172 34.4, 36.0 0.16
BXD73a m 36.24 0.51769   5 0.23152 0.0143 35.7, 37.0 0.94
BXD73b m 35.58 0.57184   5 0.25573 0.0161 34.8, 36.3 0.41
BXD75 m 36.98 0.70852   5 0.31686 0.0192 36.1, 38.0 1.54
BXD77 m 35.16 0.85907   5 0.38419 0.0244 34.1, 36.3 0.07
BXD79 m 35.1 0.73144   5 0.32711 0.0208 34.3, 36.3 0.02
BXD8 m 35.66 0.36469   5 0.1631 0.0102 35.3, 36.1 0.47
BXD81 m 33.6 0.21602   4 0.10801 0.0064 33.3, 33.8 -1.2
BXD83 m 35.85 0.47958   4 0.23979 0.0134 35.4, 36.5 0.63
BXD84 m 35.467 0.25166   3 0.1453 0.0071 35.2, 35.7 0.31
BXD85 m 35.15 0.51962   4 0.25981 0.0148 34.6, 35.8 0.06
BXD87 m 36.74 0.52249   5 0.23367 0.0142 36.0, 37.4 1.35
BXD89 m 36.0 0.88318   4 0.44159 0.0245 34.7, 36.6 0.75
BXD90 m 35.475 0.57373   4 0.28687 0.0162 34.8, 36.2 0.32
BXD95 m 34.46 0.84439   5 0.37762 0.0245 33.3, 35.6 -0.5
BXD98 m 32.8 0.56569   5 0.25298 0.0172 32.1, 33.4 -1.85
BXD99 m 34.48 0.67231   5 0.30067 0.0195 33.5, 35.1 -0.49
C57BL/6J m 36.3 0.57879   5 0.25884 0.0159 35.3, 36.7 0.99
DBA/2J m 36.78 0.53104   5 0.23749 0.0144 36.4, 37.5 1.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 35.6 0.3178458477 36.2268568685 34.9731431315
BXD100 m 36.08 0.3178458477 36.7068568685 35.4531431315
BXD101 m 34.525 0.3553624609 35.2258472851 33.8241527149
BXD11 m 35.54 0.3178458477 36.1668568685 34.9131431315
BXD12 m 36.52 0.3178458477 37.1468568685 35.8931431315
BXD16 m 34.86 0.3178458477 35.4868568685 34.2331431315
BXD2 m 34.7 0.3178458477 35.3268568685 34.0731431315
BXD27 m 32.6 0.4103372249 33.4092687374 31.7907312626
BXD32 m 35.7666666667 0.4103372249 36.5759354041 34.9573979292
BXD34 m 33.8 0.3178458477 34.4268568685 33.1731431315
BXD39 m 35.32 0.3178458477 35.9468568685 34.6931431315
BXD40 m 33.8 0.3553624609 34.5008472851 33.0991527149
BXD43 m 36.7333333333 0.4103372249 37.5426020708 35.9240645959
BXD44 m 34.4333333333 0.2369083073 34.9005648567 33.9661018099
BXD45 m 36.88 0.3178458477 37.5068568685 36.2531431315
BXD48 m 35.18 0.3178458477 35.8068568685 34.5531431315
BXD48a m 34.9666666667 0.4103372249 35.7759354041 34.1573979292
BXD49 m 35.5 0.3178458477 36.1268568685 34.8731431315
BXD50 m 34.5 0.3178458477 35.1268568685 33.8731431315
BXD51 m 35.425 0.3553624609 36.1258472851 34.7241527149
BXD53 m 34.68 0.3178458477 35.3068568685 34.0531431315
BXD55 m 36.275 0.3553624609 36.9758472851 35.5741527149
BXD56 m 35.6666666667 0.4103372249 36.4759354041 34.8573979292
BXD6 m 34.4 0.3178458477 35.0268568685 33.7731431315
BXD60 m 33.375 0.3553624609 34.0758472851 32.6741527149
BXD61 m 36.06 0.3178458477 36.6868568685 35.4331431315
BXD62 m 35.9 0.3553624609 36.6008472851 35.1991527149
BXD63 m 35.35 0.5025584118 36.3411477357 34.3588522643
BXD64 m 33.65 0.3553624609 34.3508472851 32.9491527149
BXD65 m 35.175 0.3553624609 35.8758472851 34.4741527149
BXD65a m 32.875 0.3553624609 33.5758472851 32.1741527149
BXD66 m 30.72 0.3178458477 31.3468568685 30.0931431315
BXD67 m 34.52 0.3178458477 35.1468568685 33.8931431315
BXD68 m 34.525 0.3553624609 35.2258472851 33.8241527149
BXD69 m 33.66 0.3178458477 34.2868568685 33.0331431315
BXD70 m 37.1 0.3553624609 37.8008472851 36.3991527149
BXD71 m 34.7 0.4103372249 35.5092687374 33.8907312626
BXD73 m 35.28 0.3178458477 35.9068568685 34.6531431315
BXD73a m 36.24 0.3178458477 36.8668568685 35.6131431315
BXD73b m 35.58 0.3178458477 36.2068568685 34.9531431315
BXD75 m 36.98 0.3178458477 37.6068568685 36.3531431315
BXD77 m 35.16 0.3178458477 35.7868568685 34.5331431315
BXD79 m 35.1 0.3178458477 35.7268568685 34.4731431315
BXD8 m 35.66 0.3178458477 36.2868568685 35.0331431315
BXD81 m 33.6 0.3553624609 34.3008472851 32.8991527149
BXD83 m 35.85 0.3553624609 36.5508472851 35.1491527149
BXD84 m 35.4666666667 0.4103372249 36.2759354041 34.6573979292
BXD85 m 35.15 0.3553624609 35.8508472851 34.4491527149
BXD87 m 36.74 0.3178458477 37.3668568685 36.1131431315
BXD89 m 36.0 0.3553624609 36.7008472851 35.2991527149
BXD90 m 35.475 0.3553624609 36.1758472851 34.7741527149
BXD95 m 34.46 0.3178458477 35.0868568685 33.8331431315
BXD98 m 32.8 0.3178458477 33.4268568685 32.1731431315
BXD99 m 34.48 0.3178458477 35.1068568685 33.8531431315
C57BL/6J m 36.3 0.3178458477 36.9268568685 35.6731431315
DBA/2J m 36.78 0.3178458477 37.4068568685 36.1531431315




  GWAS USING LINEAR MIXED MODELS