Project measure / variable:   Auwerx1   temp_t4_CD

ID, description, units MPD:111290   temp_t4_CD   body temperature (rectal) in cold (4°C) room, 4h exposed to cold   [°C]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 21wks
Procedure body temperature
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  STRAIN COMPARISON PLOT
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Auwerx1 - body temperature (rectal) in cold (4°C) room, 4h exposed to cold CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means35.137   °C
Median of the strain means35.175   °C
SD of the strain means± 0.87685
Coefficient of variation (CV)0.025
Min–max range of strain means32.84   –   36.76   °C
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 197.5508 3.5277 5.9928 < 0.0001
Residuals 196 115.376 0.5887


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 34.1 0.60415   5 0.27019 0.0177 33.1, 34.7 -1.18
BXD100 m 36.133 0.55076   3 0.31798 0.0152 35.6, 36.7 1.14
BXD101 m 34.875 0.22174   4 0.11087 0.0064 34.6, 35.1 -0.3
BXD11 m 33.667 0.47258   3 0.27285 0.014 33.3, 34.2 -1.68
BXD12 m 35.92 1.37   5 0.6127 0.0381 33.8, 37.3 0.89
BXD16 m 35.15 0.73258   4 0.36629 0.0208 34.2, 35.9 0.02
BXD2 m 34.325 1.2659   4 0.63295 0.0369 33.2, 36.1 -0.93
BXD27 m 34.46 0.83546   5 0.37363 0.0242 33.5, 35.4 -0.77
BXD32 m 36.76 1.1781   5 0.52688 0.032 35.4, 38.4 1.85
BXD34 m 34.075 0.88081   4 0.44041 0.0258 33.2, 35.1 -1.21
BXD39 m 35.76 1.2934   5 0.57845 0.0362 34.2, 36.8 0.71
BXD40 m 34.7 0.36056   3 0.20817 0.0104 34.4, 35.1 -0.5
BXD43 m 35.5 1.0817   3 0.6245 0.0305 34.3, 36.4 0.41
BXD44 m 34.833 0.55678   9 0.18559 0.016 34.2, 35.7 -0.35
BXD45 m 36.38 0.57619   5 0.25768 0.0158 36.0, 37.4 1.42
BXD48 m 33.7 0.57879   5 0.25884 0.0172 32.9, 34.3 -1.64
BXD48a m 35.18 0.37014   5 0.16553 0.0105 34.7, 35.6 0.05
BXD49 m 34.95 0.6455   4 0.32275 0.0185 34.0, 35.4 -0.21
BXD50 m 34.45 0.94692   4 0.47346 0.0275 33.2, 35.5 -0.78
BXD51 m 35.78 0.40866   5 0.18276 0.0114 35.3, 36.2 0.73
BXD53 m 32.9 1.5906   5 0.71134 0.0483 30.2, 34.2 -2.55
BXD55 m 35.56 0.61887   5 0.27677 0.0174 34.8, 36.5 0.48
BXD56 m 34.5 0.4899   4 0.24495 0.0142 33.9, 35.1 -0.73
BXD6 m 35.7 0.24495   5 0.10954 0.0069 35.4, 36.0 0.64
BXD60 m 34.775 0.96393   4 0.48197 0.0277 33.5, 35.8 -0.41
BXD61 m 35.533 0.56862   3 0.3283 0.016 34.9, 36.0 0.45
BXD62 m 35.7 0.86023   4 0.43012 0.0241 34.7, 36.8 0.64
BXD63 m 35.825 0.61847   4 0.30923 0.0173 34.9, 36.2 0.79
BXD64 m 33.9 0.29439   4 0.1472 0.0087 33.6, 34.2 -1.41
BXD65 m 35.6 0.66833   4 0.33417 0.0188 35.0, 36.4 0.53
BXD65a m 35.08 0.69785   5 0.31209 0.0199 34.1, 36.0 -0.06
BXD65b m 34.7 0.29439   4 0.1472 0.0085 34.3, 35.0 -0.5
BXD66 m 32.84 0.9685   5 0.43313 0.0295 31.7, 34.1 -2.62
BXD67 m 34.98 0.31145   5 0.13928 0.0089 34.6, 35.3 -0.18
BXD68 m 35.075 0.66521   4 0.3326 0.019 34.3, 35.9 -0.07
BXD69 m 34.72 0.93648   5 0.41881 0.027 33.8, 36.0 -0.48
BXD70 m 36.275 0.55603   4 0.27801 0.0153 35.5, 36.8 1.3
BXD71 m 33.92 0.99599   5 0.44542 0.0294 32.6, 35.1 -1.39
BXD73 m 35.075 0.73655   4 0.36827 0.021 34.0, 35.6 -0.07
BXD73a m 36.16 0.38471   5 0.17205 0.0106 35.7, 36.6 1.17
BXD73b m 35.06 0.41593   5 0.18601 0.0119 34.4, 35.4 -0.09
BXD75 m 36.62 0.76616   5 0.34264 0.0209 35.7, 37.4 1.69
BXD77 m 35.46 0.45056   5 0.20149 0.0127 35.0, 36.1 0.37
BXD79 m 35.42 0.57619   5 0.25768 0.0163 34.8, 36.0 0.32
BXD8 m 35.35 1.5351   4 0.76757 0.0434 33.1, 36.5 0.24
BXD81 m 35.475 0.53774   4 0.26887 0.0152 34.8, 36.1 0.39
BXD83 m 35.6 0.2   3 0.11547 0.0056 35.4, 35.8 0.53
BXD84 m 34.425 0.61847   4 0.30923 0.018 33.5, 34.8 -0.81
BXD85 m 35.5 0.33166   5 0.14832 0.0093 35.1, 35.8 0.41
BXD87 m 36.62 0.34205   5 0.15297 0.0093 36.2, 36.9 1.69
BXD89 m 34.575 0.38622   4 0.19311 0.0112 34.0, 34.8 -0.64
BXD90 m 35.175 0.17078   4 0.08539 0.0049 35.0, 35.4 0.04
BXD95 m 35.45 1.0247   4 0.51235 0.0289 34.0, 36.4 0.36
BXD98 m 34.4 1.3491   4 0.67454 0.0392 32.6, 35.7 -0.84
BXD99 m 35.4 0.88034   5 0.3937 0.0249 34.1, 36.5 0.3
C57BL/6J m 36.24 0.4219   5 0.18868 0.0116 35.7, 36.7 1.26
DBA/2J m 36.5 0.57735   4 0.28868 0.0158 35.8, 37.2 1.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 34.1 0.3431189477 34.7766790206 33.4233209794
BXD100 m 36.1333333333 0.4429646567 37.0069221925 35.2597444741
BXD101 m 34.875 0.3836186457 35.6315501445 34.1184498555
BXD11 m 33.6666666667 0.4429646567 34.5402555259 32.7930778075
BXD12 m 35.92 0.3431189477 36.5966790206 35.2433209794
BXD16 m 35.15 0.3836186457 35.9065501445 34.3934498555
BXD2 m 34.325 0.3836186457 35.0815501445 33.5684498555
BXD27 m 34.46 0.3431189477 35.1366790206 33.7833209794
BXD32 m 36.76 0.3431189477 37.4366790206 36.0833209794
BXD34 m 34.075 0.3836186457 34.8315501445 33.3184498555
BXD39 m 35.76 0.3431189477 36.4366790206 35.0833209794
BXD40 m 34.7 0.4429646567 35.5735888592 33.8264111408
BXD43 m 35.5 0.4429646567 36.3735888592 34.6264111408
BXD44 m 34.8333333333 0.2557457638 35.3377000964 34.3289665703
BXD45 m 36.38 0.3431189477 37.0566790206 35.7033209794
BXD48 m 33.7 0.3431189477 34.3766790206 33.0233209794
BXD48a m 35.18 0.3431189477 35.8566790206 34.5033209794
BXD49 m 34.95 0.3836186457 35.7065501445 34.1934498555
BXD50 m 34.45 0.3836186457 35.2065501445 33.6934498555
BXD51 m 35.78 0.3431189477 36.4566790206 35.1033209794
BXD53 m 32.9 0.3431189477 33.5766790206 32.2233209794
BXD55 m 35.56 0.3431189477 36.2366790206 34.8833209794
BXD56 m 34.5 0.3836186457 35.2565501445 33.7434498555
BXD6 m 35.7 0.3431189477 36.3766790206 35.0233209794
BXD60 m 34.775 0.3836186457 35.5315501445 34.0184498555
BXD61 m 35.5333333333 0.4429646567 36.4069221925 34.6597444741
BXD62 m 35.7 0.3836186457 36.4565501445 34.9434498555
BXD63 m 35.825 0.3836186457 36.5815501445 35.0684498555
BXD64 m 33.9 0.3836186457 34.6565501445 33.1434498555
BXD65 m 35.6 0.3836186457 36.3565501445 34.8434498555
BXD65a m 35.08 0.3431189477 35.7566790206 34.4033209794
BXD65b m 34.7 0.3836186457 35.4565501445 33.9434498555
BXD66 m 32.84 0.3431189477 33.5166790206 32.1633209794
BXD67 m 34.98 0.3431189477 35.6566790206 34.3033209794
BXD68 m 35.075 0.3836186457 35.8315501445 34.3184498555
BXD69 m 34.72 0.3431189477 35.3966790206 34.0433209794
BXD70 m 36.275 0.3836186457 37.0315501445 35.5184498555
BXD71 m 33.92 0.3431189477 34.5966790206 33.2433209794
BXD73 m 35.075 0.3836186457 35.8315501445 34.3184498555
BXD73a m 36.16 0.3431189477 36.8366790206 35.4833209794
BXD73b m 35.06 0.3431189477 35.7366790206 34.3833209794
BXD75 m 36.62 0.3431189477 37.2966790206 35.9433209794
BXD77 m 35.46 0.3431189477 36.1366790206 34.7833209794
BXD79 m 35.42 0.3431189477 36.0966790206 34.7433209794
BXD8 m 35.35 0.3836186457 36.1065501445 34.5934498555
BXD81 m 35.475 0.3836186457 36.2315501445 34.7184498555
BXD83 m 35.6 0.4429646567 36.4735888592 34.7264111408
BXD84 m 34.425 0.3836186457 35.1815501445 33.6684498555
BXD85 m 35.5 0.3431189477 36.1766790206 34.8233209794
BXD87 m 36.62 0.3431189477 37.2966790206 35.9433209794
BXD89 m 34.575 0.3836186457 35.3315501445 33.8184498555
BXD90 m 35.175 0.3836186457 35.9315501445 34.4184498555
BXD95 m 35.45 0.3836186457 36.2065501445 34.6934498555
BXD98 m 34.4 0.3836186457 35.1565501445 33.6434498555
BXD99 m 35.4 0.3431189477 36.0766790206 34.7233209794
C57BL/6J m 36.24 0.3431189477 36.9166790206 35.5633209794
DBA/2J m 36.5 0.3836186457 37.2565501445 35.7434498555




  GWAS USING LINEAR MIXED MODELS