Project measure / variable:   Auwerx1   temp_t2_HFD

ID, description, units MPD:111287   temp_t2_HFD   body temperature (rectal) in cold (4°C) room, 2h exposed to cold   [°C]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 21wks
Procedure body temperature
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  STRAIN COMPARISON PLOT
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Auwerx1 - body temperature (rectal) in cold (4°C) room, 2h exposed to cold HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means35.615   °C
Median of the strain means35.547   °C
SD of the strain means± 1.1074
Coefficient of variation (CV)0.0311
Min–max range of strain means32.925   –   37.52   °C
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 296.7682 5.3958 13.9941 < 0.0001
Residuals 196 75.5729 0.3856


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 35.92 0.55408   5 0.24779 0.0154 35.0, 36.3 0.28
BXD100 m 37.0 0.48477   5 0.21679 0.0131 36.2, 37.4 1.25
BXD101 m 34.6 0.83666   4 0.41833 0.0242 33.4, 35.3 -0.92
BXD11 m 36.24 0.60663   5 0.27129 0.0167 35.7, 36.9 0.56
BXD12 m 37.42 0.92033   5 0.41158 0.0246 36.5, 38.9 1.63
BXD16 m 35.16 0.45056   5 0.20149 0.0128 34.5, 35.7 -0.41
BXD2 m 36.08 0.54037   5 0.24166 0.015 35.5, 36.9 0.42
BXD27 m 32.925 0.86168   4 0.43084 0.0262 31.8, 33.9 -2.43
BXD32 m 35.533 0.45092   3 0.26034 0.0127 35.1, 36.0 -0.07
BXD34 m 34.72 0.51672   5 0.23108 0.0149 33.9, 35.2 -0.81
BXD39 m 35.56 0.11402   5 0.05099 0.0032 35.4, 35.7 -0.05
BXD40 m 34.3 0.62183   4 0.31091 0.0181 33.4, 34.8 -1.19
BXD43 m 37.4 0.36056   3 0.20817 0.0096 37.0, 37.7 1.61
BXD44 m 35.344 0.35746   9 0.11915 0.0101 34.8, 35.8 -0.25
BXD45 m 36.54 0.55946   5 0.2502 0.0153 35.8, 37.1 0.83
BXD48 m 35.5 0.56125   5 0.251 0.0158 34.8, 36.3 -0.1
BXD48a m 35.367 0.55076   3 0.31798 0.0156 35.0, 36.0 -0.22
BXD49 m 35.86 0.29665   5 0.13266 0.0083 35.5, 36.3 0.22
BXD50 m 35.28 0.97314   5 0.4352 0.0276 33.9, 36.6 -0.3
BXD51 m 35.025 0.46458   4 0.23229 0.0133 34.4, 35.5 -0.53
BXD53 m 35.18 0.49699   5 0.22226 0.0141 34.7, 36.0 -0.39
BXD55 m 36.85 0.31091   4 0.15546 0.0084 36.6, 37.3 1.11
BXD56 m 36.567 0.32146   3 0.18559 0.0088 36.2, 36.8 0.86
BXD6 m 35.16 1.2621   5 0.56445 0.0359 33.2, 36.5 -0.41
BXD60 m 33.875 0.40311   4 0.20156 0.0119 33.3, 34.2 -1.57
BXD61 m 36.56 0.23022   5 0.10296 0.0063 36.2, 36.8 0.85
BXD62 m 36.5 0.4761   4 0.23805 0.013 36.0, 37.0 0.8
BXD63 m 35.95 0.49497   2   0.35 0.0138 35.6, 36.3 0.3
BXD64 m 33.975 0.44253   4 0.22127 0.013 33.5, 34.4 -1.48
BXD65 m 36.05 0.50662   4 0.25331 0.0141 35.6, 36.7 0.39
BXD65a m 33.85 1.1091   4 0.55453 0.0328 32.5, 35.2 -1.59
BXD66 m 34.56 0.73007   5 0.3265 0.0211 33.6, 35.6 -0.95
BXD67 m 35.16 0.60249   5 0.26944 0.0171 34.4, 36.0 -0.41
BXD68 m 34.525 0.46458   4 0.23229 0.0135 33.9, 35.0 -0.98
BXD69 m 33.88 0.78549   5 0.35128 0.0232 33.0, 35.1 -1.57
BXD70 m 37.225 1.15   4 0.575 0.0309 35.6, 38.3 1.45
BXD71 m 34.633 0.32146   3 0.18559 0.0093 34.4, 35.0 -0.89
BXD73 m 35.04 0.55045   5 0.24617 0.0157 34.4, 35.9 -0.52
BXD73a m 37.52 0.35637   5 0.15937 0.0095 37.0, 38.0 1.72
BXD73b m 35.58 0.32711   5 0.14629 0.0092 35.1, 35.9 -0.03
BXD75 m 37.48 0.33466   5 0.14967 0.0089 37.0, 37.8 1.68
BXD77 m 35.84 0.72319   5 0.32342 0.0202 34.6, 36.3 0.2
BXD79 m 34.96 0.27019   5 0.12083 0.0077 34.6, 35.3 -0.59
BXD8 m 36.36 0.37815   5 0.16912 0.0104 36.1, 37.0 0.67
BXD81 m 33.975 0.17078   4 0.08539 0.005 33.8, 34.2 -1.48
BXD83 m 35.675 0.91059   4 0.45529 0.0255 34.7, 36.9 0.05
BXD84 m 36.2 0.65574   3 0.37859 0.0181 35.5, 36.8 0.53
BXD85 m 35.45 0.3   4 0.15 0.0085 35.2, 35.8 -0.15
BXD87 m 37.18 0.31145   5 0.13928 0.0084 36.8, 37.5 1.41
BXD89 m 36.125 1.0372   4 0.51861 0.0287 34.6, 36.9 0.46
BXD90 m 36.625 0.22174   4 0.11087 0.0061 36.4, 36.9 0.91
BXD95 m 34.78 0.82583   5 0.36932 0.0237 33.5, 35.8 -0.75
BXD98 m 33.84 0.73007   5 0.3265 0.0216 32.7, 34.6 -1.6
BXD99 m 35.5 0.67823   5 0.30332 0.0191 34.7, 36.3 -0.1
C57BL/6J m 37.02 0.76616   5 0.34264 0.0207 36.3, 38.1 1.27
DBA/2J m 37.04 0.85029   5 0.38026 0.023 36.2, 38.4 1.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 35.92 0.2776962239 36.4676561702 35.3723438298
BXD100 m 37.0 0.2776962239 37.5476561702 36.4523438298
BXD101 m 34.6 0.3104738168 35.2122982124 33.9877017876
BXD11 m 36.24 0.2776962239 36.7876561702 35.6923438298
BXD12 m 37.42 0.2776962239 37.9676561702 36.8723438298
BXD16 m 35.16 0.2776962239 35.7076561702 34.6123438298
BXD2 m 36.08 0.2776962239 36.6276561702 35.5323438298
BXD27 m 32.925 0.3104738168 33.5372982124 32.3127017876
BXD32 m 35.5333333333 0.3585042834 36.2403544088 34.8263122578
BXD34 m 34.72 0.2776962239 35.2676561702 34.1723438298
BXD39 m 35.56 0.2776962239 36.1076561702 35.0123438298
BXD40 m 34.3 0.3104738168 34.9122982124 33.6877017876
BXD43 m 37.4 0.3585042834 38.1070210755 36.6929789245
BXD44 m 35.3444444444 0.2069825445 35.7526432527 34.9362456362
BXD45 m 36.54 0.2776962239 37.0876561702 35.9923438298
BXD48 m 35.5 0.2776962239 36.0476561702 34.9523438298
BXD48a m 35.3666666667 0.3585042834 36.0736877422 34.6596455912
BXD49 m 35.86 0.2776962239 36.4076561702 35.3123438298
BXD50 m 35.28 0.2776962239 35.8276561702 34.7323438298
BXD51 m 35.025 0.3104738168 35.6372982124 34.4127017876
BXD53 m 35.18 0.2776962239 35.7276561702 34.6323438298
BXD55 m 36.85 0.3104738168 37.4622982124 36.2377017876
BXD56 m 36.5666666667 0.3585042834 37.2736877422 35.8596455912
BXD6 m 35.16 0.2776962239 35.7076561702 34.6123438298
BXD60 m 33.875 0.3104738168 34.4872982124 33.2627017876
BXD61 m 36.56 0.2776962239 37.1076561702 36.0123438298
BXD62 m 36.5 0.3104738168 37.1122982124 35.8877017876
BXD63 m 35.95 0.4390762825 36.8159204362 35.0840795638
BXD64 m 33.975 0.3104738168 34.5872982124 33.3627017876
BXD65 m 36.05 0.3104738168 36.6622982124 35.4377017876
BXD65a m 33.85 0.3104738168 34.4622982124 33.2377017876
BXD66 m 34.56 0.2776962239 35.1076561702 34.0123438298
BXD67 m 35.16 0.2776962239 35.7076561702 34.6123438298
BXD68 m 34.525 0.3104738168 35.1372982124 33.9127017876
BXD69 m 33.88 0.2776962239 34.4276561702 33.3323438298
BXD70 m 37.225 0.3104738168 37.8372982124 36.6127017876
BXD71 m 34.6333333333 0.3585042834 35.3403544088 33.9263122578
BXD73 m 35.04 0.2776962239 35.5876561702 34.4923438298
BXD73a m 37.52 0.2776962239 38.0676561702 36.9723438298
BXD73b m 35.58 0.2776962239 36.1276561702 35.0323438298
BXD75 m 37.48 0.2776962239 38.0276561702 36.9323438298
BXD77 m 35.84 0.2776962239 36.3876561702 35.2923438298
BXD79 m 34.96 0.2776962239 35.5076561702 34.4123438298
BXD8 m 36.36 0.2776962239 36.9076561702 35.8123438298
BXD81 m 33.975 0.3104738168 34.5872982124 33.3627017876
BXD83 m 35.675 0.3104738168 36.2872982124 35.0627017876
BXD84 m 36.2 0.3585042834 36.9070210755 35.4929789245
BXD85 m 35.45 0.3104738168 36.0622982124 34.8377017876
BXD87 m 37.18 0.2776962239 37.7276561702 36.6323438298
BXD89 m 36.125 0.3104738168 36.7372982124 35.5127017876
BXD90 m 36.625 0.3104738168 37.2372982124 36.0127017876
BXD95 m 34.78 0.2776962239 35.3276561702 34.2323438298
BXD98 m 33.84 0.2776962239 34.3876561702 33.2923438298
BXD99 m 35.5 0.2776962239 36.0476561702 34.9523438298
C57BL/6J m 37.02 0.2776962239 37.5676561702 36.4723438298
DBA/2J m 37.04 0.2776962239 37.5876561702 36.4923438298




  GWAS USING LINEAR MIXED MODELS