Project measure / variable:   Auwerx1   temp_t2_CD

ID, description, units MPD:111286   temp_t2_CD   body temperature (rectal) in cold (4°C) room, 2h exposed to cold   [°C]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 21wks
Procedure body temperature
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  STRAIN COMPARISON PLOT
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Auwerx1 - body temperature (rectal) in cold (4°C) room, 2h exposed to cold CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means35.594   °C
Median of the strain means35.62   °C
SD of the strain means± 0.77681
Coefficient of variation (CV)0.0218
Min–max range of strain means33.775   –   36.9   °C
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 144.0431 2.5722 5.6782 < 0.0001
Residuals 196 88.7872 0.453


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 35.7 0.35355   5 0.15811 0.0099 35.4, 36.3 0.14
BXD100 m 36.633 0.80208   3 0.46308 0.0219 35.8, 37.4 1.34
BXD101 m 35.975 0.35   4 0.175 0.0097 35.6, 36.4 0.49
BXD11 m 36.9 0.45826   3 0.26458 0.0124 36.5, 37.4 1.68
BXD12 m 36.02 1.2112   5 0.54166 0.0336 34.5, 37.4 0.55
BXD16 m 35.275 0.23629   4 0.11815 0.0067 35.1, 35.6 -0.41
BXD2 m 35.95 0.20817   4 0.10408 0.0058 35.7, 36.2 0.46
BXD27 m 35.28 0.88148   5 0.39421 0.025 34.3, 36.4 -0.4
BXD32 m 35.98 0.27749   5 0.1241 0.0077 35.7, 36.4 0.5
BXD34 m 35.55 0.78528   4 0.39264 0.0221 34.6, 36.5 -0.06
BXD39 m 34.94 0.79561   5 0.35581 0.0228 33.6, 35.7 -0.84
BXD40 m 34.533 2.1939   3 1.2667 0.0635 32.8, 37.0 -1.37
BXD43 m 36.433 0.51316   3 0.29627 0.0141 36.0, 37.0 1.08
BXD44 m 35.6 1.0392   9 0.34641 0.0292 34.1, 37.1 0.01
BXD45 m 36.78 0.74632   5 0.33377 0.0203 35.7, 37.4 1.53
BXD48 m 34.14 0.81731   5 0.36551 0.0239 32.9, 35.1 -1.87
BXD48a m 36.08 0.41473   5 0.18547 0.0115 35.7, 36.7 0.63
BXD49 m 35.725 0.73201   4 0.366 0.0205 34.7, 36.3 0.17
BXD50 m 34.275 0.63443   4 0.31721 0.0185 33.4, 34.9 -1.7
BXD51 m 35.92 0.20494   5 0.09165 0.0057 35.7, 36.1 0.42
BXD53 m 33.98 0.53572   5 0.23958 0.0158 33.5, 34.7 -2.08
BXD55 m 36.46 0.43359   5 0.19391 0.0119 36.0, 37.0 1.11
BXD56 m 35.7 0.82865   4 0.41433 0.0232 34.6, 36.6 0.14
BXD6 m 35.62 0.25884   5 0.11576 0.0073 35.3, 36.0 0.03
BXD60 m 33.775 1.1615   4 0.58077 0.0344 32.6, 35.2 -2.34
BXD61 m 36.4 0.45826   3 0.26458 0.0126 35.9, 36.8 1.04
BXD62 m 35.825 0.6994   4 0.3497 0.0195 34.9, 36.5 0.3
BXD63 m 35.8 0.64807   4 0.32404 0.0181 34.9, 36.4 0.26
BXD64 m 34.725 0.29861   4 0.1493 0.0086 34.4, 35.1 -1.12
BXD65 m 35.6 0.2708   4 0.1354 0.0076 35.4, 36.0 0.01
BXD65a m 35.88 0.35637   5 0.15937 0.0099 35.5, 36.3 0.37
BXD65b m 35.225 0.4272   4 0.2136 0.0121 34.6, 35.5 -0.48
BXD66 m 34.9 0.83367   5 0.37283 0.0239 33.7, 36.0 -0.89
BXD67 m 36.0 0.3937   5 0.17607 0.0109 35.7, 36.6 0.52
BXD68 m 35.1 1.2247   4 0.61237 0.0349 33.8, 36.5 -0.64
BXD69 m 34.98 0.63403   5 0.28355 0.0181 34.2, 35.6 -0.79
BXD70 m 36.4 0.2582   4 0.1291 0.0071 36.1, 36.7 1.04
BXD71 m 34.34 0.63482   5 0.2839 0.0185 33.4, 35.1 -1.61
BXD73 m 34.75 0.88129   4 0.44064 0.0254 33.5, 35.5 -1.09
BXD73a m 36.46 1.161   5 0.51923 0.0318 34.5, 37.5 1.11
BXD73b m 35.08 0.52154   5 0.23324 0.0149 34.4, 35.7 -0.66
BXD75 m 36.68 0.19235   5 0.08602 0.0052 36.4, 36.9 1.4
BXD77 m 35.58 0.35637   5 0.15937 0.01 35.2, 36.0 -0.02
BXD79 m 35.16 0.42778   5 0.19131 0.0122 34.6, 35.7 -0.56
BXD8 m 34.2 0.63246   4 0.31623 0.0185 33.6, 35.0 -1.79
BXD81 m 35.925 0.53151   4 0.26575 0.0148 35.5, 36.7 0.43
BXD83 m 36.633 0.40415   3 0.23333 0.011 36.4, 37.1 1.34
BXD84 m 35.275 0.27538   4 0.13769 0.0078 35.0, 35.6 -0.41
BXD85 m 35.98 0.31145   5 0.13928 0.0087 35.7, 36.5 0.5
BXD87 m 36.76 0.18166   5 0.08124 0.0049 36.6, 37.0 1.5
BXD89 m 35.55 0.1291   4 0.06455 0.0036 35.4, 35.7 -0.06
BXD90 m 35.5 0.21602   4 0.10801 0.0061 35.2, 35.7 -0.12
BXD95 m 35.425 0.49244   4 0.24622 0.0139 34.8, 36.0 -0.22
BXD98 m 34.8 0.76158   4 0.38079 0.0219 34.1, 35.6 -1.02
BXD99 m 35.6 0.33912   5 0.15166 0.0095 35.2, 36.1 0.01
C57BL/6J m 36.36 0.77006   5 0.34438 0.0212 35.2, 37.3 0.99
DBA/2J m 36.75 0.77244   4 0.38622 0.021 35.7, 37.5 1.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 35.7 0.3009969263 36.293608446 35.106391554
BXD100 m 36.6333333333 0.388585361 37.3996785419 35.8669881248
BXD101 m 35.975 0.3365247941 36.6386744186 35.3113255814
BXD11 m 36.9 0.388585361 37.6663452085 36.1336547915
BXD12 m 36.02 0.3009969263 36.613608446 35.426391554
BXD16 m 35.275 0.3365247941 35.9386744186 34.6113255814
BXD2 m 35.95 0.3365247941 36.6136744186 35.2863255814
BXD27 m 35.28 0.3009969263 35.873608446 34.686391554
BXD32 m 35.98 0.3009969263 36.573608446 35.386391554
BXD34 m 35.55 0.3365247941 36.2136744186 34.8863255814
BXD39 m 34.94 0.3009969263 35.533608446 34.346391554
BXD40 m 34.5333333333 0.388585361 35.2996785419 33.7669881248
BXD43 m 36.4333333333 0.388585361 37.1996785419 35.6669881248
BXD44 m 35.6 0.2243498628 36.0424496124 35.1575503876
BXD45 m 36.78 0.3009969263 37.373608446 36.186391554
BXD48 m 34.14 0.3009969263 34.733608446 33.546391554
BXD48a m 36.08 0.3009969263 36.673608446 35.486391554
BXD49 m 35.725 0.3365247941 36.3886744186 35.0613255814
BXD50 m 34.275 0.3365247941 34.9386744186 33.6113255814
BXD51 m 35.92 0.3009969263 36.513608446 35.326391554
BXD53 m 33.98 0.3009969263 34.573608446 33.386391554
BXD55 m 36.46 0.3009969263 37.053608446 35.866391554
BXD56 m 35.7 0.3365247941 36.3636744186 35.0363255814
BXD6 m 35.62 0.3009969263 36.213608446 35.026391554
BXD60 m 33.775 0.3365247941 34.4386744186 33.1113255814
BXD61 m 36.4 0.388585361 37.1663452085 35.6336547915
BXD62 m 35.825 0.3365247941 36.4886744186 35.1613255814
BXD63 m 35.8 0.3365247941 36.4636744186 35.1363255814
BXD64 m 34.725 0.3365247941 35.3886744186 34.0613255814
BXD65 m 35.6 0.3365247941 36.2636744186 34.9363255814
BXD65a m 35.88 0.3009969263 36.473608446 35.286391554
BXD65b m 35.225 0.3365247941 35.8886744186 34.5613255814
BXD66 m 34.9 0.3009969263 35.493608446 34.306391554
BXD67 m 36.0 0.3009969263 36.593608446 35.406391554
BXD68 m 35.1 0.3365247941 35.7636744186 34.4363255814
BXD69 m 34.98 0.3009969263 35.573608446 34.386391554
BXD70 m 36.4 0.3365247941 37.0636744186 35.7363255814
BXD71 m 34.34 0.3009969263 34.933608446 33.746391554
BXD73 m 34.75 0.3365247941 35.4136744186 34.0863255814
BXD73a m 36.46 0.3009969263 37.053608446 35.866391554
BXD73b m 35.08 0.3009969263 35.673608446 34.486391554
BXD75 m 36.68 0.3009969263 37.273608446 36.086391554
BXD77 m 35.58 0.3009969263 36.173608446 34.986391554
BXD79 m 35.16 0.3009969263 35.753608446 34.566391554
BXD8 m 34.2 0.3365247941 34.8636744186 33.5363255814
BXD81 m 35.925 0.3365247941 36.5886744186 35.2613255814
BXD83 m 36.6333333333 0.388585361 37.3996785419 35.8669881248
BXD84 m 35.275 0.3365247941 35.9386744186 34.6113255814
BXD85 m 35.98 0.3009969263 36.573608446 35.386391554
BXD87 m 36.76 0.3009969263 37.353608446 36.166391554
BXD89 m 35.55 0.3365247941 36.2136744186 34.8863255814
BXD90 m 35.5 0.3365247941 36.1636744186 34.8363255814
BXD95 m 35.425 0.3365247941 36.0886744186 34.7613255814
BXD98 m 34.8 0.3365247941 35.4636744186 34.1363255814
BXD99 m 35.6 0.3009969263 36.193608446 35.006391554
C57BL/6J m 36.36 0.3009969263 36.953608446 35.766391554
DBA/2J m 36.75 0.3365247941 37.4136744186 36.0863255814




  GWAS USING LINEAR MIXED MODELS