Project measure / variable:   Auwerx1   ogtt_gluc_t0_CD

ID, description, units MPD:111244   ogtt_gluc_t0_CD   glucose baseline, glucose tolerance test (pregavage, overnight fast)   [mg/dL]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 17wks
Procedure glucose tolerance
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  STRAIN COMPARISON PLOT
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Auwerx1 - glucose baseline, glucose tolerance test (pregavage, overnight fast) CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means105.8   mg/dL
Median of the strain means99.0   mg/dL
SD of the strain means± 24.317
Coefficient of variation (CV)0.2297
Min–max range of strain means68.0   –   171.6   mg/dL
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 149736.7518 2673.8706 9.5886 < 0.0001
Residuals 201 56050.5389 278.8584


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 72.8 8.5849   5 3.8393 0.1179 63.0, 81.0 -1.36
BXD100 m 121.0 11.533   3 6.6583 0.0953 108.0, 130.0 0.62
BXD101 m 68.0 4.899   4 2.4495 0.072 62.0, 74.0 -1.56
BXD11 m 88.25 20.549   4 10.274 0.2328 65.0, 112.0 -0.72
BXD12 m 71.4 12.381   5 5.5371 0.1734 63.0, 92.0 -1.42
BXD16 m 104.6 11.415   5 5.1049 0.1091 88.0, 117.0 -0.05
BXD2 m 115.0 6.0553   4 3.0277 0.0527 107.0, 121.0 0.38
BXD27 m 122.6 11.059   5 4.9457 0.0902 113.0, 141.0 0.69
BXD32 m 90.8 7.7266   5 3.4554 0.0851 81.0, 98.0 -0.62
BXD34 m 100.8 8.7321   4 4.3661 0.0867 94.0, 113.0 -0.21
BXD39 m 153.4 26.092   5 11.669 0.1701 122.0, 185.0 1.96
BXD40 m 97.75 22.292   4 11.146 0.228 65.0, 115.0 -0.33
BXD43 m 82.25 9.1059   4 4.5529 0.1107 72.0, 94.0 -0.97
BXD44 m 126.2 20.321   9 6.7737 0.161 105.0, 170.0 0.84
BXD45 m 154.8 21.297   4 10.649 0.1376 135.0, 182.0 2.01
BXD48 m 95.75 10.874   4 5.4371 0.1136 80.0, 105.0 -0.42
BXD48a m 124.6 21.466   5 9.6 0.1723 105.0, 157.0 0.77
BXD49 m 89.25 8.1803   4 4.0901 0.0917 82.0, 99.0 -0.68
BXD50 m 90.8 10.803   5 4.8311 0.119 73.0, 100.0 -0.62
BXD51 m 119.0 20.478   4 10.239 0.1721 96.0, 142.0 0.54
BXD53 m 84.6 10.714   5 4.7917 0.1266 74.0, 98.0 -0.87
BXD55 m 91.2 6.9065   5 3.0887 0.0757 80.0, 96.0 -0.6
BXD56 m 82.0 7.2457   5 3.2404 0.0884 72.0, 90.0 -0.98
BXD6 m 102.0 23.664   5 10.583 0.232 81.0, 137.0 -0.16
BXD60 m 110.8 36.506   5 16.326 0.3295 57.0, 160.0 0.2
BXD61 m 96.33 5.5076   3 3.1798 0.0572 91.0, 102.0 -0.39
BXD62 m 136.8 5.909   4 2.9545 0.0432 131.0, 144.0 1.27
BXD63 m 121.6 15.126   5 6.7646 0.1244 103.0, 142.0 0.65
BXD64 m 78.75 11.758   4 5.879 0.1493 69.0, 94.0 -1.11
BXD65 m 143.0 9.8995   4 4.9497 0.0692 130.0, 154.0 1.53
BXD65a m 146.4 17.473   5 7.8141 0.1193 128.0, 169.0 1.67
BXD65b m 156.2 25.825   4 12.912 0.1653 124.0, 185.0 2.07
BXD66 m 113.5 20.825   4 10.412 0.1835 97.0, 142.0 0.31
BXD67 m 113.8 24.025   5 10.744 0.2111 82.0, 138.0 0.33
BXD68 m 95.4 5.4589   5 2.4413 0.0572 88.0, 102.0 -0.43
BXD69 m 171.6 39.715   5 17.761 0.2314 135.0, 228.0 2.7
BXD70 m 83.25 15.218   4 7.6089 0.1828 68.0, 100.0 -0.93
BXD71 m 79.2 12.518   5 5.5982 0.1581 63.0, 94.0 -1.1
BXD73 m 157.8 9.9457   4 4.9728 0.063 146.0, 166.0 2.14
BXD73a m 127.5 10.661   4 5.3307 0.0836 120.0, 143.0 0.89
BXD73b m 103.4 10.526   5 4.7074 0.1018 87.0, 113.0 -0.1
BXD75 m 96.2 8.8994   5 3.9799 0.0925 83.0, 107.0 -0.4
BXD77 m 99.0 15.811   5 7.0711 0.1597 85.0, 119.0 -0.28
BXD79 m 91.6 5.9414   5 2.6571 0.0649 82.0, 98.0 -0.59
BXD8 m 77.75 2.7538   4 1.3769 0.0354 75.0, 81.0 -1.16
BXD81 m 87.75 13.525   4 6.7623 0.1541 77.0, 106.0 -0.74
BXD83 m 105.7 6.1101   3 3.5277 0.0578 99.0, 111.0 -0.01
BXD84 m 81.6 9.0443   5 4.0447 0.1108 72.0, 93.0 -1.0
BXD85 m 97.2 14.132   5 6.3198 0.1454 82.0, 115.0 -0.36
BXD87 m 96.0 6.1237   5 2.7386 0.0638 90.0, 104.0 -0.4
BXD89 m 117.2 13.647   4 6.8237 0.1164 98.0, 130.0 0.47
BXD90 m 94.0 6.733   4 3.3665 0.0716 84.0, 98.0 -0.49
BXD95 m 123.0 51.14   4 25.57 0.4158 89.0, 199.0 0.71
BXD98 m 107.2 6.2209   5 2.7821 0.058 100.0, 113.0 0.06
BXD99 m 84.8 9.4446   5 4.2237 0.1114 73.0, 95.0 -0.87
C57BL/6J m 103.5 5.7446   4 2.8723 0.0555 100.0, 112.0 -0.1
DBA/2J m 86.5 9.7468   4 4.8734 0.1127 75.0, 96.0 -0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 72.8 7.4680439532 87.5257617011 58.0742382989
BXD100 m 121.0 9.6412032865 140.0108766095 101.9891233905
BXD101 m 68.0 8.3495269691 84.4639020921 51.5360979079
BXD11 m 88.25 8.3495269691 104.7139020921 71.7860979079
BXD12 m 71.4 7.4680439532 86.1257617011 56.6742382989
BXD16 m 104.6 7.4680439532 119.3257617011 89.8742382989
BXD2 m 115.0 8.3495269691 131.4639020921 98.5360979079
BXD27 m 122.6 7.4680439532 137.3257617011 107.8742382989
BXD32 m 90.8 7.4680439532 105.5257617011 76.0742382989
BXD34 m 100.75 8.3495269691 117.2139020921 84.2860979079
BXD39 m 153.4 7.4680439532 168.1257617011 138.6742382989
BXD40 m 97.75 8.3495269691 114.2139020921 81.2860979079
BXD43 m 82.25 8.3495269691 98.7139020921 65.7860979079
BXD44 m 126.2222222222 5.5663513127 137.1981569503 115.2462874942
BXD45 m 154.75 8.3495269691 171.2139020921 138.2860979079
BXD48 m 95.75 8.3495269691 112.2139020921 79.2860979079
BXD48a m 124.6 7.4680439532 139.3257617011 109.8742382989
BXD49 m 89.25 8.3495269691 105.7139020921 72.7860979079
BXD50 m 90.8 7.4680439532 105.5257617011 76.0742382989
BXD51 m 119.0 8.3495269691 135.4639020921 102.5360979079
BXD53 m 84.6 7.4680439532 99.3257617011 69.8742382989
BXD55 m 91.2 7.4680439532 105.9257617011 76.4742382989
BXD56 m 82.0 7.4680439532 96.7257617011 67.2742382989
BXD6 m 102.0 7.4680439532 116.7257617011 87.2742382989
BXD60 m 110.8 7.4680439532 125.5257617011 96.0742382989
BXD61 m 96.3333333333 9.6412032865 115.3442099429 77.3224567238
BXD62 m 136.75 8.3495269691 153.2139020921 120.2860979079
BXD63 m 121.6 7.4680439532 136.3257617011 106.8742382989
BXD64 m 78.75 8.3495269691 95.2139020921 62.2860979079
BXD65 m 143.0 8.3495269691 159.4639020921 126.5360979079
BXD65a m 146.4 7.4680439532 161.1257617011 131.6742382989
BXD65b m 156.25 8.3495269691 172.7139020921 139.7860979079
BXD66 m 113.5 8.3495269691 129.9639020921 97.0360979079
BXD67 m 113.8 7.4680439532 128.5257617011 99.0742382989
BXD68 m 95.4 7.4680439532 110.1257617011 80.6742382989
BXD69 m 171.6 7.4680439532 186.3257617011 156.8742382989
BXD70 m 83.25 8.3495269691 99.7139020921 66.7860979079
BXD71 m 79.2 7.4680439532 93.9257617011 64.4742382989
BXD73 m 157.75 8.3495269691 174.2139020921 141.2860979079
BXD73a m 127.5 8.3495269691 143.9639020921 111.0360979079
BXD73b m 103.4 7.4680439532 118.1257617011 88.6742382989
BXD75 m 96.2 7.4680439532 110.9257617011 81.4742382989
BXD77 m 99.0 7.4680439532 113.7257617011 84.2742382989
BXD79 m 91.6 7.4680439532 106.3257617011 76.8742382989
BXD8 m 77.75 8.3495269691 94.2139020921 61.2860979079
BXD81 m 87.75 8.3495269691 104.2139020921 71.2860979079
BXD83 m 105.6666666667 9.6412032865 124.6775432762 86.6557900571
BXD84 m 81.6 7.4680439532 96.3257617011 66.8742382989
BXD85 m 97.2 7.4680439532 111.9257617011 82.4742382989
BXD87 m 96.0 7.4680439532 110.7257617011 81.2742382989
BXD89 m 117.25 8.3495269691 133.7139020921 100.7860979079
BXD90 m 94.0 8.3495269691 110.4639020921 77.5360979079
BXD95 m 123.0 8.3495269691 139.4639020921 106.5360979079
BXD98 m 107.2 7.4680439532 121.9257617011 92.4742382989
BXD99 m 84.8 7.4680439532 99.5257617011 70.0742382989
C57BL/6J m 103.5 8.3495269691 119.9639020921 87.0360979079
DBA/2J m 86.5 8.3495269691 102.9639020921 70.0360979079




  GWAS USING LINEAR MIXED MODELS