Project measure / variable:   Auwerx1   ftm_16wks_HFD

ID, description, units MPD:111229   ftm_16wks_HFD   fat tissue mass, 16 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   54 strains     sex: m     age: 16wks
Procedure NMR
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - fat tissue mass, 16 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested54 strains
Mean of the strain means15.975   g
Median of the strain means16.537   g
SD of the strain means± 5.1388
Coefficient of variation (CV)0.3217
Min–max range of strain means3.7282   –   28.057   g
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 53 6201.2372 117.0045 21.2537 < 0.0001
Residuals 187 1029.4594 5.5051


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 11.592 2.7476   5 1.2287 0.237 7.112, 14.185 -0.85
BXD100 m 15.258 3.4543   5 1.5448 0.2264 12.601, 20.302 -0.14
BXD101 m 16.478 1.5345   4 0.76723 0.0931 14.313, 17.747 0.1
BXD11 m 19.158 4.6062   5 2.06 0.2404 12.873, 24.697 0.62
BXD12 m 3.7282 1.1828   5 0.52897 0.3173 2.413, 5.196 -2.38
BXD16 m 22.211 1.517   5 0.67841 0.0683 20.699, 24.012 1.21
BXD2 m 15.081 3.7474   5 1.6759 0.2485 9.584, 18.596 -0.17
BXD27 m 21.204 0.46629   4 0.23314 0.022 20.785, 21.831 1.02
BXD32 m 15.729 1.3633   4 0.68163 0.0867 14.29, 17.045 -0.05
BXD34 m 8.13 4.8119   5 2.1519 0.5919 3.158, 14.367 -1.53
BXD39 m 19.213 0.35838   5 0.16027 0.0187 18.81, 19.574 0.63
BXD40 m 6.875 0.64604   4 0.32302 0.094 5.93, 7.37 -1.77
BXD43 m 9.0167 3.1988   3 1.8469 0.3548 5.996, 12.368 -1.35
BXD44 m 28.057 2.7222   4 1.3611 0.097 24.21, 30.621 2.35
BXD45 m 11.395 1.7464   4 0.87318 0.1533 9.4, 13.62 -0.89
BXD48 m 21.562 1.3928   4 0.69642 0.0646 19.772, 22.809 1.09
BXD48a m 20.698 2.3623   4 1.1811 0.1141 18.588, 24.038 0.92
BXD49 m 12.916 2.5467   4 1.2734 0.1972 9.968, 15.471 -0.6
BXD51 m 25.716 3.5329   4 1.7664 0.1374 22.355, 29.414 1.9
BXD53 m 12.927 2.3742   5 1.0618 0.1837 9.254, 15.573 -0.59
BXD55 m 6.2582 1.6634   5 0.74388 0.2658 4.196, 8.121 -1.89
BXD56 m 10.514 0.68829   4 0.34414 0.0655 9.784, 11.24 -1.06
BXD60 m 25.418 0.50057   5 0.22386 0.0197 24.91, 26.13 1.84
BXD61 m 18.827 1.4524   5 0.64955 0.0771 17.303, 21.109 0.56
BXD62 m 13.002 0.87355   4 0.43677 0.0672 11.778, 13.666 -0.58
BXD63 m 19.376 1.8177   4 0.90883 0.0938 17.264, 20.986 0.66
BXD64 m 17.343 2.9053   4 1.4526 0.1675 13.612, 20.509 0.27
BXD65 m 22.626 1.138   4 0.56902 0.0503 21.369, 23.866 1.29
BXD65a m 18.165 2.0772   4 1.0386 0.1144 15.75, 20.71 0.43
BXD66 m 23.683 3.2708   5 1.4627 0.1381 18.148, 26.27 1.5
BXD67 m 19.497 3.0285   5 1.3544 0.1553 14.608, 22.615 0.69
BXD68 m 10.67 3.3589   4 1.6795 0.3148 7.319, 14.989 -1.03
BXD69 m 17.173 0.63248   5 0.28285 0.0368 16.526, 17.824 0.23
BXD70 m 10.867 4.6065   4 2.3032 0.4239 4.01, 13.95 -0.99
BXD71 m 18.437 2.8463   4 1.4232 0.1544 15.054, 21.962 0.48
BXD73 m 15.318 2.2398   5 1.0017 0.1462 12.084, 17.609 -0.13
BXD73a m 15.903 2.3617   5 1.0562 0.1485 12.598, 17.666 -0.01
BXD73b m 17.949 1.2201   5 0.54566 0.068 16.062, 19.271 0.38
BXD75 m 16.595 2.1448   5 0.95916 0.1292 13.093, 18.869 0.12
BXD77 m 15.523 2.9906   5 1.3374 0.1927 11.214, 19.248 -0.09
BXD79 m 15.432 1.3353   5 0.59718 0.0865 13.224, 16.81 -0.11
BXD8 m 11.041 2.1121   5 0.94455 0.1913 8.707, 14.364 -0.96
BXD81 m 18.259 0.99991   4 0.49995 0.0548 17.274, 19.533 0.44
BXD83 m 11.112 2.0493   4 1.0247 0.1844 8.217, 13.045 -0.95
BXD84 m 17.164 2.4402   4 1.2201 0.1422 15.497, 20.749 0.23
BXD85 m 18.978 1.4842   4 0.7421 0.0782 17.309, 20.584 0.58
BXD87 m 9.1762 1.7124   5 0.76581 0.1866 6.993, 11.59 -1.32
BXD89 m 13.766 1.0324   4 0.51618 0.075 12.218, 14.32 -0.43
BXD90 m 19.249 1.815   4 0.9075 0.0943 16.909, 20.774 0.64
BXD95 m 17.678 2.9191   5 1.3055 0.1651 12.759, 20.397 0.33
BXD98 m 18.485 1.242   5 0.55546 0.0672 16.583, 19.65 0.49
BXD99 m 16.699 1.2754   5 0.57037 0.0764 15.05, 18.18 0.14
C57BL/6J m 9.0395 2.2162   4 1.1081 0.2452 6.906, 12.018 -1.35
DBA/2J m 16.46 0.61386   4 0.30693 0.0373 15.594, 17.031 0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 11.592 1.0492978891 13.6619825091 9.5220174909
BXD100 m 15.2578 1.0492978891 17.3277825091 13.1878174909
BXD101 m 16.47825 1.1731507043 18.7925608013 14.1639391987
BXD11 m 19.1584 1.0492978891 21.2283825091 17.0884174909
BXD12 m 3.7282 1.0492978891 5.7981825091 1.6582174909
BXD16 m 22.2108 1.0492978891 24.2807825091 20.1408174909
BXD2 m 15.0814 1.0492978891 17.1513825091 13.0114174909
BXD27 m 21.204 1.1731507043 23.5183108013 18.8896891987
BXD32 m 15.729 1.1731507043 18.0433108013 13.4146891987
BXD34 m 8.13 1.0492978891 10.1999825091 6.0600174909
BXD39 m 19.2134 1.0492978891 21.2833825091 17.1434174909
BXD40 m 6.875 1.1731507043 9.1893108013 4.5606891987
BXD43 m 9.0166666667 1.3546377499 11.6890025949 6.3443307384
BXD44 m 28.05725 1.1731507043 30.3715608013 25.7429391987
BXD45 m 11.395 1.1731507043 13.7093108013 9.0806891987
BXD48 m 21.56175 1.1731507043 23.8760608013 19.2474391987
BXD48a m 20.698 1.1731507043 23.0123108013 18.3836891987
BXD49 m 12.916 1.1731507043 15.2303108013 10.6016891987
BXD51 m 25.7155 1.1731507043 28.0298108013 23.4011891987
BXD53 m 12.927 1.0492978891 14.9969825091 10.8570174909
BXD55 m 6.2582 1.0492978891 8.3281825091 4.1882174909
BXD56 m 10.5135 1.1731507043 12.8278108013 8.1991891987
BXD60 m 25.418 1.0492978891 27.4879825091 23.3480174909
BXD61 m 18.827 1.0492978891 20.8969825091 16.7570174909
BXD62 m 13.00225 1.1731507043 15.3165608013 10.6879391987
BXD63 m 19.376 1.1731507043 21.6903108013 17.0616891987
BXD64 m 17.343 1.1731507043 19.6573108013 15.0286891987
BXD65 m 22.626 1.1731507043 24.9403108013 20.3116891987
BXD65a m 18.165 1.1731507043 20.4793108013 15.8506891987
BXD66 m 23.6828 1.0492978891 25.7527825091 21.6128174909
BXD67 m 19.4966 1.0492978891 21.5665825091 17.4266174909
BXD68 m 10.67 1.1731507043 12.9843108013 8.3556891987
BXD69 m 17.1728 1.0492978891 19.2427825091 15.1028174909
BXD70 m 10.8675 1.1731507043 13.1818108013 8.5531891987
BXD71 m 18.43725 1.1731507043 20.7515608013 16.1229391987
BXD73 m 15.3182 1.0492978891 17.3881825091 13.2482174909
BXD73a m 15.903 1.0492978891 17.9729825091 13.8330174909
BXD73b m 17.949 1.0492978891 20.0189825091 15.8790174909
BXD75 m 16.5952 1.0492978891 18.6651825091 14.5252174909
BXD77 m 15.523 1.0492978891 17.5929825091 13.4530174909
BXD79 m 15.4316 1.0492978891 17.5015825091 13.3616174909
BXD8 m 11.0408 1.0492978891 13.1107825091 8.9708174909
BXD81 m 18.25925 1.1731507043 20.5735608013 15.9449391987
BXD83 m 11.112 1.1731507043 13.4263108013 8.7976891987
BXD84 m 17.16375 1.1731507043 19.4780608013 14.8494391987
BXD85 m 18.97775 1.1731507043 21.2920608013 16.6634391987
BXD87 m 9.1762 1.0492978891 11.2461825091 7.1062174909
BXD89 m 13.766 1.1731507043 16.0803108013 11.4516891987
BXD90 m 19.24925 1.1731507043 21.5635608013 16.9349391987
BXD95 m 17.678 1.0492978891 19.7479825091 15.6080174909
BXD98 m 18.4848 1.0492978891 20.5547825091 16.4148174909
BXD99 m 16.6994 1.0492978891 18.7693825091 14.6294174909
C57BL/6J m 9.0395 1.1731507043 11.3538108013 6.7251891987
DBA/2J m 16.45975 1.1731507043 18.7740608013 14.1454391987




  GWAS USING LINEAR MIXED MODELS