Project measure / variable:   Auwerx1   bw_sac_HFD

ID, description, units MPD:111225   bw_sac_HFD   body weight at sacrifice, 29 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 29wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight at sacrifice, 29 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means49.005   g
Median of the strain means48.519   g
SD of the strain means± 7.7421
Coefficient of variation (CV)0.158
Min–max range of strain means32.21   –   64.08   g
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 15005.0587 272.8192 11.2578 < 0.0001
Residuals 188 4555.9708 24.2339


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 38.89 4.6355   5 2.0731 0.1192 31.12, 42.93 -1.31
BXD100 m 56.96 5.6501   5 2.5268 0.0992 49.56, 62.76 1.03
BXD101 m 51.87 2.496   4 1.248 0.0481 48.77, 54.35 0.37
BXD11 m 55.59 4.3219   4 2.161 0.0778 49.79, 60.19 0.85
BXD12 m 32.864 3.7281   5 1.6673 0.1134 27.32, 36.3 -2.08
BXD16 m 58.1 3.5677   5 1.5955 0.0614 53.77, 61.58 1.17
BXD2 m 45.61 8.3651   5 3.741 0.1834 32.18, 54.09 -0.44
BXD27 m 40.492 3.6799   4 1.84 0.0909 36.89, 44.91 -1.1
BXD32 m 48.47 5.5524   3 3.2057 0.1146 45.15, 54.88 -0.07
BXD34 m 36.564 6.9933   5 3.1275 0.1913 29.45, 45.74 -1.61
BXD39 m 47.948 0.83509   5 0.37346 0.0174 46.96, 49.05 -0.14
BXD40 m 32.21 5.0161   4 2.508 0.1557 28.11, 38.79 -2.17
BXD43 m 49.237 2.0942   3 1.2091 0.0425 47.52, 51.57 0.03
BXD44 m 63.73 3.5343   7 1.3358 0.0555 58.01, 68.42 1.9
BXD45 m 44.648 4.5301   4 2.265 0.1015 38.2, 48.5 -0.56
BXD48 m 55.96 7.711   5 3.4485 0.1378 44.2, 63.36 0.9
BXD48a m 61.39 4.4524   3 2.5706 0.0725 57.83, 66.38 1.6
BXD49 m 53.33 15.434   4 7.7169 0.2894 38.93, 72.24 0.56
BXD50 m 48.022 1.9266   5 0.86161 0.0401 44.94, 50.14 -0.13
BXD51 m 64.08 5.1458   4 2.5729 0.0803 58.15, 70.53 1.95
BXD53 m 47.92 2.2264   5 0.99569 0.0465 44.7, 50.9 -0.14
BXD55 m 43.647 2.2709   4 1.1354 0.052 41.13, 46.19 -0.69
BXD56 m 41.285 0.34648   2   0.245 0.0084 41.04, 41.53 -1.0
BXD6 m 47.476 6.4107   5 2.867 0.135 37.54, 54.6 -0.2
BXD60 m 62.62 2.7304   5 1.2211 0.0436 58.0, 64.6 1.76
BXD61 m 53.03 5.7621   5 2.5769 0.1087 47.1, 60.49 0.52
BXD62 m 45.538 1.629   4 0.81448 0.0358 43.76, 46.96 -0.45
BXD63 m 48.53 0.39598   2   0.28 0.0082 48.25, 48.81 -0.06
BXD64 m 50.06 5.8401   4 2.9201 0.1167 42.5, 56.06 0.14
BXD65 m 64.05 3.3506   4 1.6753 0.0523 60.75, 68.71 1.94
BXD65a m 52.23 8.0925   4 4.0463 0.1549 42.93, 61.84 0.42
BXD66 m 60.92 4.8649   5 2.1757 0.0799 52.41, 64.14 1.54
BXD67 m 53.36 3.8421   5 1.7182 0.072 48.68, 57.94 0.56
BXD68 m 41.49 5.5549   4 2.7774 0.1339 33.68, 46.64 -0.97
BXD69 m 38.294 1.1202   5 0.50099 0.0293 36.35, 39.25 -1.38
BXD70 m 50.28 3.2435   3 1.8726 0.0645 47.13, 53.61 0.16
BXD71 m 53.39 5.1689   3 2.9843 0.0968 48.65, 58.9 0.57
BXD73 m 43.915 3.6317   4 1.8159 0.0827 38.74, 46.9 -0.66
BXD73a m 46.844 1.9452   5 0.86991 0.0415 44.1, 48.79 -0.28
BXD73b m 48.508 2.0503   5 0.91693 0.0423 46.12, 50.59 -0.06
BXD75 m 46.39 3.3119   5 1.4811 0.0714 43.74, 50.9 -0.34
BXD77 m 44.182 4.6247   5 2.0682 0.1047 39.3, 49.48 -0.62
BXD79 m 49.036 4.3277   5 1.9354 0.0883 42.49, 53.45 0.0
BXD8 m 36.914 4.9679   5 2.2217 0.1346 29.56, 42.54 -1.56
BXD81 m 49.5 2.0751   3 1.198 0.0419 47.15, 51.08 0.06
BXD83 m 36.94 4.1597   4 2.0798 0.1126 30.99, 40.39 -1.56
BXD84 m 57.1 8.5965   3 4.9632 0.1505 50.82, 66.9 1.05
BXD85 m 56.78 3.1595   4 1.5798 0.0556 53.02, 59.43 1.0
BXD87 m 39.14 2.4009   5 1.0737 0.0613 36.04, 42.57 -1.27
BXD89 m 45.535 2.0389   4 1.0194 0.0448 43.51, 47.73 -0.45
BXD90 m 50.12 7.0888   4 3.5444 0.1414 45.3, 60.64 0.14
BXD95 m 53.43 8.2619   5 3.6948 0.1546 44.29, 61.69 0.57
BXD98 m 52.64 3.0303   5 1.3552 0.0576 47.52, 55.08 0.47
BXD99 m 51.67 4.231   5 1.8922 0.0819 47.05, 56.4 0.34
C57BL/6J m 47.228 3.5605   5 1.5923 0.0754 42.06, 51.13 -0.23
DBA/2J m 48.328 1.8252   5 0.81627 0.0378 46.42, 50.85 -0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 38.89 2.2015398018 43.2328954328 34.5471045672
BXD100 m 56.956 2.2015398018 61.2988954328 52.6131045672
BXD101 m 51.87 2.461396326 56.7255047035 47.0144952965
BXD11 m 55.585 2.461396326 60.4405047035 50.7294952965
BXD12 m 32.864 2.2015398018 37.2068954328 28.5211045672
BXD16 m 58.098 2.2015398018 62.4408954328 53.7551045672
BXD2 m 45.61 2.2015398018 49.9528954328 41.2671045672
BXD27 m 40.4925 2.461396326 45.3480047035 35.6369952965
BXD32 m 48.47 2.8421756628 54.0766538952 42.8633461048
BXD34 m 36.564 2.2015398018 40.9068954328 32.2211045672
BXD39 m 47.948 2.2015398018 52.2908954328 43.6051045672
BXD40 m 32.21 2.461396326 37.0655047035 27.3544952965
BXD43 m 49.2366666667 2.8421756628 54.8433205619 43.6300127714
BXD44 m 63.7314285714 1.8606407305 67.4018451243 60.0610120185
BXD45 m 44.6475 2.461396326 49.5030047035 39.7919952965
BXD48 m 55.958 2.2015398018 60.3008954328 51.6151045672
BXD48a m 61.3866666667 2.8421756628 66.9933205619 55.7800127714
BXD49 m 53.3275 2.461396326 58.1830047035 48.4719952965
BXD50 m 48.022 2.2015398018 52.3648954328 43.6791045672
BXD51 m 64.0775 2.461396326 68.9330047035 59.2219952965
BXD53 m 47.92 2.2015398018 52.2628954328 43.5771045672
BXD55 m 43.6475 2.461396326 48.5030047035 38.7919952965
BXD56 m 41.285 3.4809400666 48.1517206039 34.4182793961
BXD6 m 47.476 2.2015398018 51.8188954328 43.1331045672
BXD60 m 62.622 2.2015398018 66.9648954328 58.2791045672
BXD61 m 53.032 2.2015398018 57.3748954328 48.6891045672
BXD62 m 45.5375 2.461396326 50.3930047035 40.6819952965
BXD63 m 48.53 3.4809400666 55.3967206039 41.6632793961
BXD64 m 50.065 2.461396326 54.9205047035 45.2094952965
BXD65 m 64.0525 2.461396326 68.9080047035 59.1969952965
BXD65a m 52.235 2.461396326 57.0905047035 47.3794952965
BXD66 m 60.922 2.2015398018 65.2648954328 56.5791045672
BXD67 m 53.356 2.2015398018 57.6988954328 49.0131045672
BXD68 m 41.49 2.461396326 46.3455047035 36.6344952965
BXD69 m 38.294 2.2015398018 42.6368954328 33.9511045672
BXD70 m 50.2833333333 2.8421756628 55.8899872286 44.6766794381
BXD71 m 53.3866666667 2.8421756628 58.9933205619 47.7800127714
BXD73 m 43.915 2.461396326 48.7705047035 39.0594952965
BXD73a m 46.844 2.2015398018 51.1868954328 42.5011045672
BXD73b m 48.508 2.2015398018 52.8508954328 44.1651045672
BXD75 m 46.39 2.2015398018 50.7328954328 42.0471045672
BXD77 m 44.182 2.2015398018 48.5248954328 39.8391045672
BXD79 m 49.036 2.2015398018 53.3788954328 44.6931045672
BXD8 m 36.914 2.2015398018 41.2568954328 32.5711045672
BXD81 m 49.5 2.8421756628 55.1066538952 43.8933461048
BXD83 m 36.94 2.461396326 41.7955047035 32.0844952965
BXD84 m 57.1033333333 2.8421756628 62.7099872286 51.4966794381
BXD85 m 56.7825 2.461396326 61.6380047035 51.9269952965
BXD87 m 39.14 2.2015398018 43.4828954328 34.7971045672
BXD89 m 45.535 2.461396326 50.3905047035 40.6794952965
BXD90 m 50.12 2.461396326 54.9755047035 45.2644952965
BXD95 m 53.43 2.2015398018 57.7728954328 49.0871045672
BXD98 m 52.64 2.2015398018 56.9828954328 48.2971045672
BXD99 m 51.666 2.2015398018 56.0088954328 47.3231045672
C57BL/6J m 47.228 2.2015398018 51.5708954328 42.8851045672
DBA/2J m 48.328 2.2015398018 52.6708954328 43.9851045672




  GWAS USING LINEAR MIXED MODELS