Project measure / variable:   Auwerx1   bw_28wks_HFD

ID, description, units MPD:111221   bw_28wks_HFD   body weight at 28 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 28wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight at 28 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means48.976   g
Median of the strain means49.73   g
SD of the strain means± 7.6943
Coefficient of variation (CV)0.1571
Min–max range of strain means31.935   –   64.79   g
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 15329.0592 278.7102 11.5468 < 0.0001
Residuals 190 4586.1146 24.1374


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 37.238 2.7638   5 1.236 0.0742 32.71, 40.02 -1.53
BXD100 m 54.09 6.3957   5 2.8602 0.1182 45.62, 61.18 0.66
BXD101 m 49.905 4.0443   4 2.0221 0.081 44.08, 53.44 0.12
BXD11 m 57.19 4.8481   4 2.4241 0.0848 50.9, 62.18 1.07
BXD12 m 34.368 3.794   5 1.6967 0.1104 28.82, 38.43 -1.9
BXD16 m 61.15 3.8204   5 1.7085 0.0625 57.09, 65.17 1.58
BXD2 m 46.246 8.387   5 3.7508 0.1814 32.83, 54.52 -0.35
BXD27 m 41.205 3.4981   4 1.749 0.0849 36.94, 45.09 -1.01
BXD32 m 51.21 5.6469   3 3.2602 0.1103 46.61, 57.51 0.29
BXD34 m 38.9 6.598   5 2.9507 0.1696 32.51, 47.39 -1.31
BXD39 m 48.138 0.73353   5 0.32805 0.0152 47.13, 48.7 -0.11
BXD40 m 31.935 3.9481   4 1.974 0.1236 27.64, 36.34 -2.21
BXD43 m 50.22 2.1282   3 1.2287 0.0424 48.4, 52.56 0.16
BXD44 m 64.61 4.409   8 1.5588 0.0682 58.99, 72.64 2.03
BXD45 m 43.716 4.32   5 1.932 0.0988 40.72, 51.12 -0.68
BXD48 m 56.52 7.4485   5 3.3311 0.1318 46.63, 63.97 0.98
BXD48a m 58.72 4.9207   3 2.8409 0.0838 55.61, 64.39 1.27
BXD49 m 52.64 13.929   4 6.9643 0.2646 38.97, 69.26 0.48
BXD50 m 48.116 2.4827   5 1.1103 0.0516 43.91, 50.23 -0.11
BXD51 m 59.58 7.2133   4 3.6066 0.1211 49.91, 67.15 1.38
BXD53 m 49.054 1.6794   5 0.75104 0.0342 46.47, 50.8 0.01
BXD55 m 41.733 1.6192   4 0.80961 0.0388 39.67, 43.15 -0.94
BXD56 m 44.79 0.08485   2   0.06 0.0019 44.73, 44.85 -0.54
BXD6 m 48.682 5.2957   5 2.3683 0.1088 41.09, 54.96 -0.04
BXD60 m 64.79 1.8934   5 0.84677 0.0292 61.73, 66.13 2.06
BXD61 m 53.21 2.169   5 0.97002 0.0408 50.93, 56.57 0.55
BXD62 m 45.51 2.0267   4 1.0134 0.0445 42.68, 47.05 -0.45
BXD63 m 47.865 0.14849   2   0.105 0.0031 47.76, 47.97 -0.14
BXD64 m 50.24 5.8735   4 2.9367 0.1169 42.58, 56.37 0.16
BXD65 m 64.44 3.3706   4 1.6853 0.0523 61.51, 69.18 2.01
BXD65a m 54.0 8.5961   4 4.2981 0.1592 43.92, 63.96 0.65
BXD66 m 54.44 6.0821   5 2.72 0.1117 43.63, 57.65 0.71
BXD67 m 53.57 4.1505   5 1.8562 0.0775 48.21, 58.13 0.6
BXD68 m 41.23 5.9843   4 2.9922 0.1451 32.96, 46.82 -1.01
BXD69 m 41.048 1.607   5 0.71868 0.0391 38.41, 42.77 -1.03
BXD70 m 49.61 2.2795   3 1.3161 0.0459 47.22, 51.76 0.08
BXD71 m 56.3 5.3352   3 3.0803 0.0948 51.44, 62.01 0.95
BXD73 m 43.623 2.558   4 1.279 0.0586 40.64, 46.67 -0.7
BXD73a m 47.128 2.5523   5 1.1414 0.0542 44.36, 50.15 -0.24
BXD73b m 49.942 2.1112   5 0.94417 0.0423 47.48, 52.65 0.13
BXD75 m 46.59 3.8228   5 1.7096 0.0821 42.41, 51.34 -0.31
BXD77 m 43.342 5.5275   5 2.472 0.1275 37.27, 49.35 -0.73
BXD79 m 51.19 4.3882   5 1.9625 0.0857 44.76, 55.44 0.29
BXD8 m 37.712 5.0487   5 2.2579 0.1339 30.37, 43.72 -1.46
BXD81 m 51.08 1.8977   3 1.0956 0.0372 48.96, 52.62 0.27
BXD83 m 36.797 4.5251   4 2.2625 0.123 30.23, 40.39 -1.58
BXD84 m 56.85 9.1336   3 5.2733 0.1607 48.73, 66.74 1.02
BXD85 m 56.58 2.9187   4 1.4594 0.0516 53.9, 59.41 0.99
BXD87 m 36.562 2.7015   5 1.2082 0.0739 32.46, 39.39 -1.61
BXD89 m 45.345 2.7127   4 1.3564 0.0598 42.73, 48.66 -0.47
BXD90 m 49.85 6.8155   4 3.4078 0.1367 43.73, 59.59 0.11
BXD95 m 53.59 7.7366   5 3.4599 0.1444 45.17, 61.23 0.6
BXD98 m 54.88 2.8903   5 1.2926 0.0527 50.37, 57.53 0.77
BXD99 m 50.95 4.935   5 2.207 0.0969 45.25, 56.27 0.26
C57BL/6J m 43.9 3.9223   5 1.7541 0.0893 39.26, 47.09 -0.66
DBA/2J m 40.558 3.6717   5 1.642 0.0905 36.45, 45.1 -1.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 37.238 2.1971547556 41.5719496757 32.9040503243
BXD100 m 54.092 2.1971547556 58.4259496757 49.7580503243
BXD101 m 49.905 2.4564936953 54.750503043 45.059496957
BXD11 m 57.1875 2.4564936953 62.033003043 52.341996957
BXD12 m 34.368 2.1971547556 38.7019496757 30.0340503243
BXD16 m 61.148 2.1971547556 65.4819496757 56.8140503243
BXD2 m 46.246 2.1971547556 50.5799496757 41.9120503243
BXD27 m 41.205 2.4564936953 46.050503043 36.359496957
BXD32 m 51.2066666667 2.8365145925 56.8017716391 45.6115616942
BXD34 m 38.9 2.1971547556 43.2339496757 34.5660503243
BXD39 m 48.138 2.1971547556 52.4719496757 43.8040503243
BXD40 m 31.935 2.4564936953 36.780503043 27.089496957
BXD43 m 50.22 2.8365145925 55.8151049724 44.6248950276
BXD44 m 64.61375 1.7370033499 68.0400380599 61.1874619401
BXD45 m 43.716 2.1971547556 48.0499496757 39.3820503243
BXD48 m 56.516 2.1971547556 60.8499496757 52.1820503243
BXD48a m 58.7166666667 2.8365145925 64.3117716391 53.1215616942
BXD49 m 52.6425 2.4564936953 57.488003043 47.796996957
BXD50 m 48.116 2.1971547556 52.4499496757 43.7820503243
BXD51 m 59.58 2.4564936953 64.425503043 54.734496957
BXD53 m 49.054 2.1971547556 53.3879496757 44.7200503243
BXD55 m 41.7325 2.4564936953 46.578003043 36.886996957
BXD56 m 44.79 3.4740066998 51.6425761199 37.9374238801
BXD6 m 48.682 2.1971547556 53.0159496757 44.3480503243
BXD60 m 64.786 2.1971547556 69.1199496757 60.4520503243
BXD61 m 53.21 2.1971547556 57.5439496757 48.8760503243
BXD62 m 45.51 2.4564936953 50.355503043 40.664496957
BXD63 m 47.865 3.4740066998 54.7175761199 41.0124238801
BXD64 m 50.2425 2.4564936953 55.088003043 45.396996957
BXD65 m 64.4425 2.4564936953 69.288003043 59.596996957
BXD65a m 54.0 2.4564936953 58.845503043 49.154496957
BXD66 m 54.442 2.1971547556 58.7759496757 50.1080503243
BXD67 m 53.574 2.1971547556 57.9079496757 49.2400503243
BXD68 m 41.23 2.4564936953 46.075503043 36.384496957
BXD69 m 41.048 2.1971547556 45.3819496757 36.7140503243
BXD70 m 49.61 2.8365145925 55.2051049724 44.0148950276
BXD71 m 56.3033333333 2.8365145925 61.8984383058 50.7082283609
BXD73 m 43.6225 2.4564936953 48.468003043 38.776996957
BXD73a m 47.128 2.1971547556 51.4619496757 42.7940503243
BXD73b m 49.942 2.1971547556 54.2759496757 45.6080503243
BXD75 m 46.59 2.1971547556 50.9239496757 42.2560503243
BXD77 m 43.342 2.1971547556 47.6759496757 39.0080503243
BXD79 m 51.192 2.1971547556 55.5259496757 46.8580503243
BXD8 m 37.712 2.1971547556 42.0459496757 33.3780503243
BXD81 m 51.08 2.8365145925 56.6751049724 45.4848950276
BXD83 m 36.7975 2.4564936953 41.643003043 31.951996957
BXD84 m 56.8533333333 2.8365145925 62.4484383058 51.2582283609
BXD85 m 56.575 2.4564936953 61.420503043 51.729496957
BXD87 m 36.562 2.1971547556 40.8959496757 32.2280503243
BXD89 m 45.345 2.4564936953 50.190503043 40.499496957
BXD90 m 49.85 2.4564936953 54.695503043 45.004496957
BXD95 m 53.586 2.1971547556 57.9199496757 49.2520503243
BXD98 m 54.882 2.1971547556 59.2159496757 50.5480503243
BXD99 m 50.95 2.1971547556 55.2839496757 46.6160503243
C57BL/6J m 43.9 2.1971547556 48.2339496757 39.5660503243
DBA/2J m 40.558 2.1971547556 44.8919496757 36.2240503243




  GWAS USING LINEAR MIXED MODELS