Project measure / variable:   Auwerx1   bw_22wks_HFD

ID, description, units MPD:111209   bw_22wks_HFD   body weight at 22 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 22wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight at 22 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means46.949   g
Median of the strain means47.599   g
SD of the strain means± 7.0553
Coefficient of variation (CV)0.1503
Min–max range of strain means29.976   –   61.16   g
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 13152.5346 239.137 16.7065 < 0.0001
Residuals 197 2819.8536 14.314


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 38.374 3.8389   5 1.7168 0.1 32.16, 42.48 -1.22
BXD100 m 53.67 4.4509   5 1.9905 0.0829 49.45, 58.64 0.95
BXD101 m 49.312 1.5993   4 0.79966 0.0324 47.16, 50.81 0.33
BXD11 m 48.108 4.6948   5 2.0996 0.0976 40.21, 52.15 0.16
BXD12 m 29.976 1.7067   5 0.76324 0.0569 27.67, 32.02 -2.41
BXD16 m 58.7 3.2251   5 1.4423 0.0549 54.08, 62.26 1.67
BXD2 m 45.404 5.5446   5 2.4796 0.1221 36.36, 50.4 -0.22
BXD27 m 49.993 1.6122   4 0.80612 0.0322 48.12, 52.04 0.43
BXD32 m 48.243 5.7539   3 3.322 0.1193 43.16, 54.49 0.18
BXD34 m 39.372 6.9452   5 3.106 0.1764 31.28, 47.98 -1.07
BXD39 m 46.85 1.1202   5 0.50097 0.0239 45.28, 48.14 -0.01
BXD40 m 30.708 2.677   4 1.3385 0.0872 28.43, 34.45 -2.3
BXD43 m 43.24 3.8692   3 2.2339 0.0895 38.96, 46.49 -0.53
BXD44 m 61.16 3.9383   9 1.3128 0.0644 54.76, 68.79 2.01
BXD45 m 43.016 3.0966   5 1.3848 0.072 38.19, 46.59 -0.56
BXD48 m 55.6 4.9292   5 2.2044 0.0887 48.83, 60.8 1.23
BXD48a m 58.87 5.5671   3 3.2142 0.0946 55.09, 65.26 1.69
BXD49 m 51.37 8.4954   5 3.7993 0.1654 40.04, 61.22 0.63
BXD50 m 46.538 3.6261   5 1.6217 0.0779 41.6, 49.65 -0.06
BXD51 m 59.35 4.8708   4 2.4354 0.0821 53.94, 64.32 1.76
BXD53 m 48.116 2.3625   5 1.0565 0.0491 44.62, 50.27 0.17
BXD55 m 39.177 0.73889   4 0.36944 0.0189 38.5, 40.23 -1.1
BXD56 m 41.93 0.98015   3 0.56589 0.0234 41.31, 43.06 -0.71
BXD6 m 45.104 3.795   5 1.6972 0.0841 40.11, 49.91 -0.26
BXD60 m 59.64 2.2813   5 1.0202 0.0383 56.84, 62.34 1.8
BXD61 m 50.55 1.3304   5 0.59496 0.0263 49.19, 52.44 0.51
BXD62 m 43.425 1.6043   4 0.80213 0.0369 41.05, 44.57 -0.5
BXD63 m 47.09 1.5981   2   1.13 0.0339 45.96, 48.22 0.02
BXD64 m 48.345 5.3957   4 2.6979 0.1116 41.18, 53.93 0.2
BXD65 m 57.28 2.326   4 1.163 0.0406 54.95, 60.28 1.46
BXD65a m 52.02 3.8917   4 1.9458 0.0748 48.18, 57.44 0.72
BXD66 m 49.484 4.0451   5 1.809 0.0817 42.41, 52.7 0.36
BXD67 m 49.702 3.4245   5 1.5315 0.0689 44.1, 53.1 0.39
BXD68 m 42.045 3.73   4 1.865 0.0887 37.31, 46.4 -0.7
BXD69 m 41.032 1.4588   5 0.65238 0.0356 39.6, 43.14 -0.84
BXD70 m 46.403 3.7613   4 1.8807 0.0811 41.82, 50.68 -0.08
BXD71 m 51.41 4.4147   3 2.5488 0.0859 47.88, 56.36 0.63
BXD73 m 41.138 4.3755   5 1.9568 0.1064 34.28, 44.31 -0.82
BXD73a m 46.198 1.3565   5 0.60663 0.0294 44.36, 48.01 -0.11
BXD73b m 48.316 2.0142   5 0.90079 0.0417 46.26, 50.5 0.19
BXD75 m 44.906 2.166   5 0.96865 0.0482 42.01, 46.94 -0.29
BXD77 m 45.074 4.9528   5 2.215 0.1099 39.76, 50.63 -0.27
BXD79 m 47.052 3.1686   5 1.417 0.0673 41.75, 49.73 0.01
BXD8 m 36.028 4.4134   5 1.9737 0.1225 30.33, 41.51 -1.55
BXD81 m 48.2 2.3979   4 1.1989 0.0497 46.11, 51.15 0.18
BXD83 m 35.758 3.8384   4 1.9192 0.1073 30.69, 38.76 -1.59
BXD84 m 51.8 5.3724   3 3.1017 0.1037 48.66, 58.0 0.69
BXD85 m 52.74 2.0921   4 1.046 0.0397 50.45, 54.84 0.82
BXD87 m 33.216 1.9836   5 0.88707 0.0597 30.55, 36.06 -1.95
BXD89 m 39.988 1.8071   4 0.90353 0.0452 38.27, 42.03 -0.99
BXD90 m 50.68 3.4913   4 1.7457 0.0689 45.55, 53.38 0.53
BXD95 m 51.17 5.2662   5 2.3551 0.1029 41.96, 55.03 0.6
BXD98 m 51.27 2.809   5 1.2562 0.0548 47.35, 54.15 0.61
BXD99 m 51.56 3.9853   5 1.7823 0.0773 47.95, 57.63 0.65
C57BL/6J m 39.002 4.6892   5 2.0971 0.1202 31.76, 43.77 -1.13
DBA/2J m 44.416 1.8648   5 0.83396 0.042 42.92, 46.48 -0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 38.374 1.6919797538 41.7107177981 35.0372822019
BXD100 m 53.666 1.6919797538 57.0027177981 50.3292822019
BXD101 m 49.3125 1.891690873 53.0430639091 45.5819360909
BXD11 m 48.108 1.6919797538 51.4447177981 44.7712822019
BXD12 m 29.976 1.6919797538 33.3127177981 26.6392822019
BXD16 m 58.702 1.6919797538 62.0387177981 55.3652822019
BXD2 m 45.404 1.6919797538 48.7407177981 42.0672822019
BXD27 m 49.9925 1.891690873 53.7230639091 46.2619360909
BXD32 m 48.2433333333 2.1843364695 52.5510174876 43.935649179
BXD34 m 39.372 1.6919797538 42.7087177981 36.0352822019
BXD39 m 46.85 1.6919797538 50.1867177981 43.5132822019
BXD40 m 30.7075 1.891690873 34.4380639091 26.9769360909
BXD43 m 43.24 2.1843364695 47.5476841543 38.9323158457
BXD44 m 61.1633333333 1.2611272487 63.6503759394 58.6762907273
BXD45 m 43.016 1.6919797538 46.3527177981 39.6792822019
BXD48 m 55.596 1.6919797538 58.9327177981 52.2592822019
BXD48a m 58.8666666667 2.1843364695 63.174350821 54.5589825124
BXD49 m 51.374 1.6919797538 54.7107177981 48.0372822019
BXD50 m 46.538 1.6919797538 49.8747177981 43.2012822019
BXD51 m 59.3475 1.891690873 63.0780639091 55.6169360909
BXD53 m 48.116 1.6919797538 51.4527177981 44.7792822019
BXD55 m 39.1775 1.891690873 42.9080639091 35.4469360909
BXD56 m 41.93 2.1843364695 46.2376841543 37.6223158457
BXD6 m 45.104 1.6919797538 48.4407177981 41.7672822019
BXD60 m 59.636 1.6919797538 62.9727177981 56.2992822019
BXD61 m 50.548 1.6919797538 53.8847177981 47.2112822019
BXD62 m 43.425 1.891690873 47.1555639091 39.6944360909
BXD63 m 47.09 2.6752548885 52.3658140756 41.8141859244
BXD64 m 48.345 1.891690873 52.0755639091 44.6144360909
BXD65 m 57.2825 1.891690873 61.0130639091 53.5519360909
BXD65a m 52.015 1.891690873 55.7455639091 48.2844360909
BXD66 m 49.484 1.6919797538 52.8207177981 46.1472822019
BXD67 m 49.702 1.6919797538 53.0387177981 46.3652822019
BXD68 m 42.045 1.891690873 45.7755639091 38.3144360909
BXD69 m 41.032 1.6919797538 44.3687177981 37.6952822019
BXD70 m 46.4025 1.891690873 50.1330639091 42.6719360909
BXD71 m 51.41 2.1843364695 55.7176841543 47.1023158457
BXD73 m 41.138 1.6919797538 44.4747177981 37.8012822019
BXD73a m 46.198 1.6919797538 49.5347177981 42.8612822019
BXD73b m 48.316 1.6919797538 51.6527177981 44.9792822019
BXD75 m 44.906 1.6919797538 48.2427177981 41.5692822019
BXD77 m 45.074 1.6919797538 48.4107177981 41.7372822019
BXD79 m 47.052 1.6919797538 50.3887177981 43.7152822019
BXD8 m 36.028 1.6919797538 39.3647177981 32.6912822019
BXD81 m 48.2 1.891690873 51.9305639091 44.4694360909
BXD83 m 35.7575 1.891690873 39.4880639091 32.0269360909
BXD84 m 51.7966666667 2.1843364695 56.104350821 47.4889825124
BXD85 m 52.74 1.891690873 56.4705639091 49.0094360909
BXD87 m 33.216 1.6919797538 36.5527177981 29.8792822019
BXD89 m 39.9875 1.891690873 43.7180639091 36.2569360909
BXD90 m 50.68 1.891690873 54.4105639091 46.9494360909
BXD95 m 51.17 1.6919797538 54.5067177981 47.8332822019
BXD98 m 51.274 1.6919797538 54.6107177981 47.9372822019
BXD99 m 51.558 1.6919797538 54.8947177981 48.2212822019
C57BL/6J m 39.002 1.6919797538 42.3387177981 35.6652822019
DBA/2J m 44.416 1.6919797538 47.7527177981 41.0792822019




  GWAS USING LINEAR MIXED MODELS