Project measure / variable:   Auwerx1   bw_21wks_HFD

ID, description, units MPD:111207   bw_21wks_HFD   body weight at 21 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   55 strains     sex: m     age: 21wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight at 21 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested55 strains
Mean of the strain means46.324   g
Median of the strain means47.49   g
SD of the strain means± 7.1089
Coefficient of variation (CV)0.1535
Min–max range of strain means29.48   –   59.96   g
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 54 13174.4957 243.9721 17.0321 < 0.0001
Residuals 196 2807.5508 14.3242


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 36.694 3.8177   5 1.7073 0.104 30.46, 40.22 -1.35
BXD100 m 52.88 5.0397   5 2.2538 0.0953 47.8, 58.93 0.92
BXD101 m 48.338 1.4375   4 0.71873 0.0297 46.56, 50.08 0.28
BXD11 m 50.32 4.9178   5 2.1993 0.0977 42.25, 53.67 0.56
BXD12 m 29.48 1.9197   5 0.85852 0.0651 27.4, 31.57 -2.37
BXD16 m 58.47 3.0807   5 1.3777 0.0527 54.12, 61.54 1.71
BXD2 m 43.612 5.3136   5 2.3763 0.1218 35.5, 48.74 -0.38
BXD27 m 49.733 1.6276   4 0.8138 0.0327 48.07, 51.93 0.48
BXD32 m 47.49 5.2154   3 3.0111 0.1098 42.66, 53.02 0.16
BXD34 m 38.872 7.1424   5 3.1942 0.1837 30.72, 47.57 -1.05
BXD39 m 46.154 1.0661   5 0.47676 0.0231 44.76, 47.51 -0.02
BXD40 m 30.87 2.5114   4 1.2557 0.0814 28.84, 34.48 -2.17
BXD43 m 43.54 3.8827   3 2.2417 0.0892 39.33, 46.98 -0.39
BXD44 m 59.43 4.0272   9 1.3424 0.0678 53.6, 67.2 1.84
BXD45 m 40.278 2.4567   5 1.0987 0.061 36.52, 43.33 -0.85
BXD48 m 54.56 5.3198   5 2.3791 0.0975 46.98, 59.8 1.16
BXD48a m 56.75 4.5952   3 2.653 0.081 53.58, 62.02 1.47
BXD49 m 50.13 7.84   5 3.5062 0.1564 39.73, 59.12 0.54
BXD50 m 45.84 4.1941   5 1.8757 0.0915 40.57, 49.66 -0.07
BXD51 m 57.1 5.2245   4 2.6123 0.0915 51.57, 62.42 1.52
BXD53 m 48.64 2.4584   5 1.0994 0.0505 45.07, 50.8 0.33
BXD55 m 38.065 0.7273   4 0.36365 0.0191 37.26, 38.71 -1.16
BXD56 m 40.205 2.1785   4 1.0892 0.0542 37.12, 42.2 -0.86
BXD6 m 45.466 2.6046   5 1.1648 0.0573 41.72, 49.06 -0.12
BXD60 m 59.96 2.4892   5 1.1132 0.0415 57.32, 63.09 1.92
BXD61 m 49.202 1.4308   5 0.63985 0.0291 47.7, 51.39 0.4
BXD63 m 46.365 0.70004   2   0.495 0.0151 45.87, 46.86 0.01
BXD64 m 47.617 5.0349   4 2.5174 0.1057 41.25, 53.48 0.18
BXD65 m 56.59 2.3678   4 1.1839 0.0418 53.83, 59.59 1.44
BXD65a m 51.54 3.468   4 1.734 0.0673 48.45, 56.51 0.73
BXD66 m 48.936 3.9976   5 1.7878 0.0817 41.82, 51.4 0.37
BXD67 m 49.534 3.4472   5 1.5416 0.0696 43.59, 52.19 0.45
BXD68 m 40.552 4.2736   4 2.1368 0.1054 35.67, 45.79 -0.81
BXD69 m 41.072 1.1474   5 0.51312 0.0279 39.78, 42.49 -0.74
BXD70 m 44.85 3.4497   4 1.7249 0.0769 40.64, 48.76 -0.21
BXD71 m 50.22 4.7519   4 2.376 0.0946 45.65, 56.61 0.55
BXD73 m 40.456 4.3635   5 1.9514 0.1079 33.68, 43.82 -0.83
BXD73a m 44.428 1.6111   5 0.72052 0.0363 42.42, 46.46 -0.27
BXD73b m 49.766 2.292   5 1.025 0.0461 47.27, 52.49 0.48
BXD75 m 44.236 2.2333   5 0.99875 0.0505 41.81, 46.32 -0.29
BXD77 m 45.232 4.6138   5 2.0634 0.102 40.2, 50.21 -0.15
BXD79 m 46.29 3.2577   5 1.4569 0.0704 40.71, 48.36 0.0
BXD8 m 34.776 4.7941   5 2.144 0.1379 28.4, 40.49 -1.62
BXD81 m 48.2 2.3979   4 1.1989 0.0497 46.11, 51.15 0.26
BXD83 m 36.108 3.8584   4 1.9292 0.1069 30.46, 39.09 -1.44
BXD84 m 50.92 5.4123   3 3.1248 0.1063 47.41, 57.15 0.65
BXD85 m 53.26 2.262   4 1.131 0.0425 51.01, 55.54 0.98
BXD87 m 31.884 1.9932   5 0.89141 0.0625 29.2, 34.81 -2.03
BXD89 m 39.733 2.1509   4 1.0754 0.0541 36.87, 41.89 -0.93
BXD90 m 50.04 3.4642   4 1.7321 0.0692 44.85, 51.95 0.52
BXD95 m 51.47 5.6496   5 2.5266 0.1098 41.98, 56.58 0.72
BXD98 m 50.45 2.5401   5 1.1359 0.0503 46.77, 53.24 0.58
BXD99 m 49.746 3.9824   5 1.781 0.0801 46.12, 55.58 0.48
C57BL/6J m 37.676 4.143   5 1.8528 0.11 31.54, 42.32 -1.22
DBA/2J m 43.776 1.7943   5 0.80244 0.041 42.25, 46.1 -0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 36.694 1.6925861045 40.0320188279 33.3559811721
BXD100 m 52.884 1.6925861045 56.2220188279 49.5459811721
BXD101 m 48.3375 1.8923687937 52.0695185046 44.6054814954
BXD11 m 50.322 1.6925861045 53.6600188279 46.9839811721
BXD12 m 29.48 1.6925861045 32.8180188279 26.1419811721
BXD16 m 58.466 1.6925861045 61.8040188279 55.1279811721
BXD2 m 43.612 1.6925861045 46.9500188279 40.2739811721
BXD27 m 49.7325 1.8923687937 53.4645185046 46.0004814954
BXD32 m 47.49 2.1851192649 51.7993637765 43.1806362235
BXD34 m 38.872 1.6925861045 42.2100188279 35.5339811721
BXD39 m 46.154 1.6925861045 49.4920188279 42.8159811721
BXD40 m 30.87 1.8923687937 34.6020185046 27.1379814954
BXD43 m 43.54 2.1851192649 47.8493637765 39.2306362235
BXD44 m 59.4266666667 1.2615791958 61.9146790031 56.9386543302
BXD45 m 40.278 1.6925861045 43.6160188279 36.9399811721
BXD48 m 54.556 1.6925861045 57.8940188279 51.2179811721
BXD48a m 56.75 2.1851192649 61.0593637765 52.4406362235
BXD49 m 50.128 1.6925861045 53.4660188279 46.7899811721
BXD50 m 45.84 1.6925861045 49.1780188279 42.5019811721
BXD51 m 57.0975 1.8923687937 60.8295185046 53.3654814954
BXD53 m 48.64 1.6925861045 51.9780188279 45.3019811721
BXD55 m 38.065 1.8923687937 41.7970185046 34.3329814954
BXD56 m 40.205 1.8923687937 43.9370185046 36.4729814954
BXD6 m 45.466 1.6925861045 48.8040188279 42.1279811721
BXD60 m 59.964 1.6925861045 63.3020188279 56.6259811721
BXD61 m 49.202 1.6925861045 52.5400188279 45.8639811721
BXD63 m 46.365 2.6762136131 51.6428711843 41.0871288157
BXD64 m 47.6175 1.8923687937 51.3495185046 43.8854814954
BXD65 m 56.585 1.8923687937 60.3170185046 52.8529814954
BXD65a m 51.5425 1.8923687937 55.2745185046 47.8104814954
BXD66 m 48.936 1.6925861045 52.2740188279 45.5979811721
BXD67 m 49.534 1.6925861045 52.8720188279 46.1959811721
BXD68 m 40.5525 1.8923687937 44.2845185046 36.8204814954
BXD69 m 41.072 1.6925861045 44.4100188279 37.7339811721
BXD70 m 44.85 1.8923687937 48.5820185046 41.1179814954
BXD71 m 50.2175 1.8923687937 53.9495185046 46.4854814954
BXD73 m 40.456 1.6925861045 43.7940188279 37.1179811721
BXD73a m 44.428 1.6925861045 47.7660188279 41.0899811721
BXD73b m 49.766 1.6925861045 53.1040188279 46.4279811721
BXD75 m 44.236 1.6925861045 47.5740188279 40.8979811721
BXD77 m 45.232 1.6925861045 48.5700188279 41.8939811721
BXD79 m 46.29 1.6925861045 49.6280188279 42.9519811721
BXD8 m 34.776 1.6925861045 38.1140188279 31.4379811721
BXD81 m 48.2 1.8923687937 51.9320185046 44.4679814954
BXD83 m 36.1075 1.8923687937 39.8395185046 32.3754814954
BXD84 m 50.9166666667 2.1851192649 55.2260304432 46.6073028901
BXD85 m 53.26 1.8923687937 56.9920185046 49.5279814954
BXD87 m 31.884 1.6925861045 35.2220188279 28.5459811721
BXD89 m 39.7325 1.8923687937 43.4645185046 36.0004814954
BXD90 m 50.0425 1.8923687937 53.7745185046 46.3104814954
BXD95 m 51.466 1.6925861045 54.8040188279 48.1279811721
BXD98 m 50.454 1.6925861045 53.7920188279 47.1159811721
BXD99 m 49.746 1.6925861045 53.0840188279 46.4079811721
C57BL/6J m 37.676 1.6925861045 41.0140188279 34.3379811721
DBA/2J m 43.776 1.6925861045 47.1140188279 40.4379811721




  GWAS USING LINEAR MIXED MODELS